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The map label for this gene is rpmC

Identifier: 239618257

GI number: 239618257

Start: 2019554

End: 2019754

Strand: Reverse

Name: rpmC

Synonym: Kole_1894

Alternate gene names: 239618257

Gene position: 2019754-2019554 (Counterclockwise)

Preceding gene: 239618258

Following gene: 239618256

Centisome position: 87.73

GC content: 41.29

Gene sequence:

>201_bases
ATGAAAGCAACAGAACTTCAGAAGTTCACAGACGAGGAGCTCAAGCAGATGCTTGACGATTTGAAAAGAAAGTTGATGGA
TCTCAGGTTTCAGCTCGAGATGAACAAATTAACCAACACTTCTCAGATAAAGTTTGTTAAAAGAGATATAGCAAGAATAA
AGACAATCCTCCGCGGTCGCGAGCTTGGGGTAAGGAGGTAA

Upstream 100 bases:

>100_bases
TTAACGATGAACTAGCCAAAGAAGCCCTTGCTTACGCCGCTACCAAGCTCCCAATCAAGACAAAGATTGTTCCAAGATAC
GAAATAGGGGGTGAGCTCTG

Downstream 100 bases:

>100_bases
CAGCTATGCCAAGGAAAAAATTAGTCGGAACCGTTGTAAGCAATAAAATGGATAAAACTGTAGTAGTCAGAGTTGAAAGA
ACTTTTGCTCACCCTCTCTA

Product: ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MKATELQKFTDEELKQMLDDLKRKLMDLRFQLEMNKLTNTSQIKFVKRDIARIKTILRGRELGVRR

Sequences:

>Translated_66_residues
MKATELQKFTDEELKQMLDDLKRKLMDLRFQLEMNKLTNTSQIKFVKRDIARIKTILRGRELGVRR
>Mature_66_residues
MKATELQKFTDEELKQMLDDLKRKLMDLRFQLEMNKLTNTSQIKFVKRDIARIKTILRGRELGVRR

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_KOSOT (C5CGQ6)

Other databases:

- EMBL:   CP001634
- RefSeq:   YP_002941579.1
- GeneID:   7967816
- GenomeReviews:   CP001634_GR
- KEGG:   kol:Kole_1894
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- InterPro:   IPR018254
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 7981; Mature: 7981

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATELQKFTDEELKQMLDDLKRKLMDLRFQLEMNKLTNTSQIKFVKRDIARIKTILRGR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ELGVRR
HCCCCC
>Mature Secondary Structure
MKATELQKFTDEELKQMLDDLKRKLMDLRFQLEMNKLTNTSQIKFVKRDIARIKTILRGR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ELGVRR
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA