| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239618227
Identifier: 239618227
GI number: 239618227
Start: 2000857
End: 2001879
Strand: Reverse
Name: 239618227
Synonym: Kole_1864
Alternate gene names: NA
Gene position: 2001879-2000857 (Counterclockwise)
Preceding gene: 239618228
Following gene: 239618226
Centisome position: 86.96
GC content: 38.51
Gene sequence:
>1023_bases TTGTTCGAAAAGTTCGTAACTGCCATAAATTTCTGGGAAGATCTTGCTGAGATTTCGAGAGTACTCGTCAAGAAAAAATA CATAATACCGGTCTTTAGTGTCCTCGAATATGGAGAGAACGCTTTAAAGAAGGCTGCAGAACGCTATTTCGAATACAACG TCCTAGATGTAGATGAAGTTATCACCACAGCCATCCACCCATCAAACGTTGTTTTTCAACATGTTGAGGTTCCGAAGGTA AAAAACGAGAAGAGCCTCATGAACGTGGCCAATTTCAAGATAGCAACTCAGTTCTCTCTTCCGCCAGCTGAAGTCATTCC AAGCCCTTTAAACAGCTTAAAAGCAATTAAGAACTCTGTTATACCAATTTTTGCTGTGACAAGGGACAGATTTTTAAAAA ATTTTCTTGAAAAGATTAAAGAAGTTGGTTTCCCCGAACCTGATATTGTGGATATCAATCCTCTCCCGATTTTGAAGCTT CCACCTCGAGAAATTTTTGCTGGTTCCAGAATACTCTTTTCTGTTGATCTGGACTACTCTATTTTGTACATTATCAAAGA CTCCGAAATAATTGGAATCAACTACATAGGTGAAGGTTTTAATGCTATCATAGACCACCTAACCAAGCCAGATGAAAGTA AATTTGATTTCTTAAAAAATTTTTTGACCTGTCAAGAAGCTGTCGATACGGACCTTGTTGATGAAGCCTCCAACTATCTT TCTCAGACTATTGGTTACCAGTTAAGGATGTACATATCAAATACATTCTCCAGCTCTCCCAACACCTCAATCAGCGATGA ACCTTACTTTGATACGGTTTTTGTAGTAGCTCAAAGTGATCTTTCAACAAAGATCTATGTTGAAACCTTTAAGAGAATAC TTGGTGATGAAAAAAATGTTTTAGCTCTACCCTTACGTATGGACGCTTCGCCCCAGTTTTCATACAACGTTGCGGGATTG CTTGTAAGAGGGGGTGAGATTCTTGGTAAACGTAAACTTGCATTCAAAGAAGAGAGTCTATAG
Upstream 100 bases:
>100_bases TTATAGAGAAAGGTTCCACTACTTTTTCATTTGAAGATGGTTCTTCGCTGGTTATCATGCCAGTAACCGGTAGAGTAGTT TATTAATAGGAGTGAAAGGG
Downstream 100 bases:
>100_bases CCTTTTCACCTTCTTTGTTGTAATAGGAATATCACTGGGAATAATACTTATGGGAAAATTCATTCTTGCTAAAGGTTTTG AAAGCCGATTGAACCAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MFEKFVTAINFWEDLAEISRVLVKKKYIIPVFSVLEYGENALKKAAERYFEYNVLDVDEVITTAIHPSNVVFQHVEVPKV KNEKSLMNVANFKIATQFSLPPAEVIPSPLNSLKAIKNSVIPIFAVTRDRFLKNFLEKIKEVGFPEPDIVDINPLPILKL PPREIFAGSRILFSVDLDYSILYIIKDSEIIGINYIGEGFNAIIDHLTKPDESKFDFLKNFLTCQEAVDTDLVDEASNYL SQTIGYQLRMYISNTFSSSPNTSISDEPYFDTVFVVAQSDLSTKIYVETFKRILGDEKNVLALPLRMDASPQFSYNVAGL LVRGGEILGKRKLAFKEESL
Sequences:
>Translated_340_residues MFEKFVTAINFWEDLAEISRVLVKKKYIIPVFSVLEYGENALKKAAERYFEYNVLDVDEVITTAIHPSNVVFQHVEVPKV KNEKSLMNVANFKIATQFSLPPAEVIPSPLNSLKAIKNSVIPIFAVTRDRFLKNFLEKIKEVGFPEPDIVDINPLPILKL PPREIFAGSRILFSVDLDYSILYIIKDSEIIGINYIGEGFNAIIDHLTKPDESKFDFLKNFLTCQEAVDTDLVDEASNYL SQTIGYQLRMYISNTFSSSPNTSISDEPYFDTVFVVAQSDLSTKIYVETFKRILGDEKNVLALPLRMDASPQFSYNVAGL LVRGGEILGKRKLAFKEESL >Mature_340_residues MFEKFVTAINFWEDLAEISRVLVKKKYIIPVFSVLEYGENALKKAAERYFEYNVLDVDEVITTAIHPSNVVFQHVEVPKV KNEKSLMNVANFKIATQFSLPPAEVIPSPLNSLKAIKNSVIPIFAVTRDRFLKNFLEKIKEVGFPEPDIVDINPLPILKL PPREIFAGSRILFSVDLDYSILYIIKDSEIIGINYIGEGFNAIIDHLTKPDESKFDFLKNFLTCQEAVDTDLVDEASNYL SQTIGYQLRMYISNTFSSSPNTSISDEPYFDTVFVVAQSDLSTKIYVETFKRILGDEKNVLALPLRMDASPQFSYNVAGL LVRGGEILGKRKLAFKEESL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38533; Mature: 38533
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEKFVTAINFWEDLAEISRVLVKKKYIIPVFSVLEYGENALKKAAERYFEYNVLDVDEV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEHHHH ITTAIHPSNVVFQHVEVPKVKNEKSLMNVANFKIATQFSLPPAEVIPSPLNSLKAIKNSV HHHHCCCCCCEEEEECCCCCCCHHHHHHHHCEEEEEEECCCHHHHCCCCHHHHHHHHHCC IPIFAVTRDRFLKNFLEKIKEVGFPEPDIVDINPLPILKLPPREIFAGSRILFSVDLDYS CEEEEHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEECCHHHHHCCCEEEEEEECCCE ILYIIKDSEIIGINYIGEGFNAIIDHLTKPDESKFDFLKNFLTCQEAVDTDLVDEASNYL EEEEEECCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHH SQTIGYQLRMYISNTFSSSPNTSISDEPYFDTVFVVAQSDLSTKIYVETFKRILGDEKNV HHHHHHHEEEEEHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCE LALPLRMDASPQFSYNVAGLLVRGGEILGKRKLAFKEESL EEEEEEECCCCCCCCCEEEEEEECCHHHCCHHHCCCCCCC >Mature Secondary Structure MFEKFVTAINFWEDLAEISRVLVKKKYIIPVFSVLEYGENALKKAAERYFEYNVLDVDEV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEHHHH ITTAIHPSNVVFQHVEVPKVKNEKSLMNVANFKIATQFSLPPAEVIPSPLNSLKAIKNSV HHHHCCCCCCEEEEECCCCCCCHHHHHHHHCEEEEEEECCCHHHHCCCCHHHHHHHHHCC IPIFAVTRDRFLKNFLEKIKEVGFPEPDIVDINPLPILKLPPREIFAGSRILFSVDLDYS CEEEEHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEECCHHHHHCCCEEEEEEECCCE ILYIIKDSEIIGINYIGEGFNAIIDHLTKPDESKFDFLKNFLTCQEAVDTDLVDEASNYL EEEEEECCCEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHH SQTIGYQLRMYISNTFSSSPNTSISDEPYFDTVFVVAQSDLSTKIYVETFKRILGDEKNV HHHHHHHEEEEEHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCE LALPLRMDASPQFSYNVAGLLVRGGEILGKRKLAFKEESL EEEEEEECCCCCCCCCEEEEEEECCHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA