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The map label for this gene is 239618223

Identifier: 239618223

GI number: 239618223

Start: 1990464

End: 1991297

Strand: Reverse

Name: 239618223

Synonym: Kole_1859

Alternate gene names: NA

Gene position: 1991297-1990464 (Counterclockwise)

Preceding gene: 239618224

Following gene: 239618220

Centisome position: 86.5

GC content: 43.65

Gene sequence:

>834_bases
ATGGATAGGAACCCGGTCTTTGCCGGTAGATTTTACGCTTCCAATGCTGAAGAATTGAAAAAGCAGATAACTGCATGTTA
CGATCACCCCGTAGGTCCGGGTGAATTGCCCGGACCAGTTTTTTCTTTTGCGCTCAAAAATGCTGGACTCATTACTCCAC
ACGCAGGTTATATGTACAGTGGTCCTGTTGCGGCCCACGGTTATCTGGAACTGTCGAAAATTGGTAAACCCAGAAAGATA
ATCATTATAGGCCCGAATCATACAGGTTATGGCGCGCGGCTGTCCATATGGCCTGAAGGCAGCTGGCATACTCCTCTTGG
AACATTACGAATAGACGAATCCCTTGTTGGTGAACTAGTAAGGAATTCCCAGGGTGAATTGAAACCGGACACTTCCGCTC
ACCTTTACGAACACTCCATTGAAGTGCAGCTTCCATTCATCCAGCACATCTTTGATAACGATCCCACAATCGTTCCAATA
ATAATGACAGACCAAAGCATAAACGCCGTAAGAACTTTGGTAGAAGCCATTTCAAGCATTCTAAAAAAAGAAGAAGGGAT
ATTTGTTATCGCGTCTTCAGACATGAACCATTATGACAATCACGAAACAACACTTAGAAAAGACGAACTTCTCATAAAAG
CTTTGCTAACAAAAGATATTGACAGAATTTATCAGGTCGCCCGGGAAAACCGAATAACTGCATGTGGATTGGGACCAATA
GCAGTGGTTCTGAAACTTTTCGACGAACTGAAAATATTAAAGCATGCCACGAGCGGCGACGTTTCTGGAGATAAATATCA
TACAGTGGGCTACCTTTCTGCCATCCTCAGTTAA

Upstream 100 bases:

>100_bases
GCGATTTACCGTTCATTGGGAAACTTTTCAGGGCCGAAAAGACAACGAAAGAACAGAGGGAAATGGTCATATTCATAACG
GCGAAGGTGGTGGCCCCATA

Downstream 100 bases:

>100_bases
ATTTTATCCAGAAAATATTTCCTTCTTTTGAGATATCCAGGTAAACATCCCATCCCGCTTTTCTAGCCAATCGTCTCGCG
ATGGTTAAACCAAGTCCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MDRNPVFAGRFYASNAEELKKQITACYDHPVGPGELPGPVFSFALKNAGLITPHAGYMYSGPVAAHGYLELSKIGKPRKI
IIIGPNHTGYGARLSIWPEGSWHTPLGTLRIDESLVGELVRNSQGELKPDTSAHLYEHSIEVQLPFIQHIFDNDPTIVPI
IMTDQSINAVRTLVEAISSILKKEEGIFVIASSDMNHYDNHETTLRKDELLIKALLTKDIDRIYQVARENRITACGLGPI
AVVLKLFDELKILKHATSGDVSGDKYHTVGYLSAILS

Sequences:

>Translated_277_residues
MDRNPVFAGRFYASNAEELKKQITACYDHPVGPGELPGPVFSFALKNAGLITPHAGYMYSGPVAAHGYLELSKIGKPRKI
IIIGPNHTGYGARLSIWPEGSWHTPLGTLRIDESLVGELVRNSQGELKPDTSAHLYEHSIEVQLPFIQHIFDNDPTIVPI
IMTDQSINAVRTLVEAISSILKKEEGIFVIASSDMNHYDNHETTLRKDELLIKALLTKDIDRIYQVARENRITACGLGPI
AVVLKLFDELKILKHATSGDVSGDKYHTVGYLSAILS
>Mature_277_residues
MDRNPVFAGRFYASNAEELKKQITACYDHPVGPGELPGPVFSFALKNAGLITPHAGYMYSGPVAAHGYLELSKIGKPRKI
IIIGPNHTGYGARLSIWPEGSWHTPLGTLRIDESLVGELVRNSQGELKPDTSAHLYEHSIEVQLPFIQHIFDNDPTIVPI
IMTDQSINAVRTLVEAISSILKKEEGIFVIASSDMNHYDNHETTLRKDELLIKALLTKDIDRIYQVARENRITACGLGPI
AVVLKLFDELKILKHATSGDVSGDKYHTVGYLSAILS

Specific function: Unknown

COG id: COG1355

COG function: function code R; Predicted dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0103 family [H]

Homologues:

Organism=Homo sapiens, GI7705720, Length=304, Percent_Identity=25.9868421052632, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32566861, Length=271, Percent_Identity=28.0442804428044, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI25146594, Length=271, Percent_Identity=28.0442804428044, Blast_Score=88, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6322467, Length=209, Percent_Identity=28.2296650717703, Blast_Score=85, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21357419, Length=307, Percent_Identity=28.6644951140065, Blast_Score=86, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020619
- InterPro:   IPR002737 [H]

Pfam domain/function: PF01875 Memo [H]

EC number: NA

Molecular weight: Translated: 30551; Mature: 30551

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRNPVFAGRFYASNAEELKKQITACYDHPVGPGELPGPVFSFALKNAGLITPHAGYMYS
CCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEECCCCCCEEC
GPVAAHGYLELSKIGKPRKIIIIGPNHTGYGARLSIWPEGSWHTPLGTLRIDESLVGELV
CCCCCCCEEEHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEECHHHHHHHH
RNSQGELKPDTSAHLYEHSIEVQLPFIQHIFDNDPTIVPIIMTDQSINAVRTLVEAISSI
HCCCCCCCCCCCHHHEECEEEEEEHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHH
LKKEEGIFVIASSDMNHYDNHETTLRKDELLIKALLTKDIDRIYQVARENRITACGLGPI
HHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHH
AVVLKLFDELKILKHATSGDVSGDKYHTVGYLSAILS
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MDRNPVFAGRFYASNAEELKKQITACYDHPVGPGELPGPVFSFALKNAGLITPHAGYMYS
CCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEECCCCCCEEC
GPVAAHGYLELSKIGKPRKIIIIGPNHTGYGARLSIWPEGSWHTPLGTLRIDESLVGELV
CCCCCCCEEEHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEECHHHHHHHH
RNSQGELKPDTSAHLYEHSIEVQLPFIQHIFDNDPTIVPIIMTDQSINAVRTLVEAISSI
HCCCCCCCCCCCHHHEECEEEEEEHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHH
LKKEEGIFVIASSDMNHYDNHETTLRKDELLIKALLTKDIDRIYQVARENRITACGLGPI
HHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHH
AVVLKLFDELKILKHATSGDVSGDKYHTVGYLSAILS
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA