| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is 239618165
Identifier: 239618165
GI number: 239618165
Start: 1926247
End: 1927326
Strand: Direct
Name: 239618165
Synonym: Kole_1799
Alternate gene names: NA
Gene position: 1926247-1927326 (Clockwise)
Preceding gene: 239618164
Following gene: 239618166
Centisome position: 83.67
GC content: 40.83
Gene sequence:
>1080_bases ATGGTCGATCGAGATACGTCACAGGTTGTAGATATCGTTGCCTTTCGTGATACGAAAGACGTCACCGAATGGTTGAAAGG ATATCCGGATATAGAAGTGGTATCACGTGATGGTTCGATCAGCTATGCAAAAGCCATAGAAGAAGCATTTCCTCAGGCCA TACAGGTTAGTAACCGATTTCATTTAGTCAAGAATCTCACCGAAGAAGCCAAAGAATACATAAAACGGACCCTACCCAGG AAAATCAAAATGAGCGGCATGACTGAATTTCCTGAAGAGAACTGCCTTGAACCGAAGAACAAATGCACTCGCCTGGAAAT GTTACAAATGCAACGAGAGAAAGAGAAGAACAAAAAGGTTCAAAAGGTTAAGAAACTCTTCTTCAAACGAGGTTATTCAT CTAGAAAGATAGCCATAGAATTAGGATTATCACCGAGAACAGTTTTAAAGTACATAAAGTACGAAGGCAAAATGATTCAC GGGTCAAAAGGTGCGAGCAAAAGAAGCAACCTCGATCCTTACAAGGATACCATCATTGCGATGAACCTGGACAGGGGAAC AACAATGGAAATCTTCCGAACCATTTGCAAAGAAGGATACAGGGGTTCTTATTCCAACTTGAAGACATTCTTAGCAAAAC ACAACAAGGAATCGGGGAGAAGAAACAGAAATCCACCGACGACACCGATTCTGGAGAGGAGACATTTGATCACTCTGTTG TACAAAGATATTTCGAAACTCAAAGAAAGCGAACAGAAAAAAGTACGAATCTATATTGAGGGTAACGGAGATCTGCAGAA GGTCTATTCAGCGATAAAGGAATTTAGACGAATCCTGGCTCAAAAAGATACCAACAATCTTGAAAAATGGATAGAAACAA CGAAGACATATTCAATTCCGGAACTCAATCACTTTGTCCACGGGATTGAAAGAGACCTGCCGGCTGTGAAGAATGCGGCT AGACTGGACGATAACAATGGACTCATAGAAGGAATCATAAACAAGATTAAAGTGATCAAGAGAGTTATGTACGGAAGATG TTCGTTTGAACTGCTGAGGTTGAAGGTTCTTATGCTTTAG
Upstream 100 bases:
>100_bases TACGGATATTAAAAAAAACAAGTTAGTTGTAAACACCCGAGTCAAGAGAATCTGCATCGACGATTTTGCCATAAAGAAAG GCCACACATATGGGACAGTG
Downstream 100 bases:
>100_bases TTCATAACTTTTGCGGAAGAACCATTTTTATTTTGCCATACACAGTCAAGAATCTTTCCAAACCAAGAATACATACGCTT TTATGTATAATAATACTACT
Product: transposase IS204/IS1001/IS1096/IS1165 family protein
Products: NA
Alternate protein names: IS6 Family Transposase; Transposase For Insertion Sequence Element; Transposase Of ISMdi2 ISL3 Family; Transposase Subfamily; IS Transposase; ISL3 Family Transposase; Transposase Of
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MVDRDTSQVVDIVAFRDTKDVTEWLKGYPDIEVVSRDGSISYAKAIEEAFPQAIQVSNRFHLVKNLTEEAKEYIKRTLPR KIKMSGMTEFPEENCLEPKNKCTRLEMLQMQREKEKNKKVQKVKKLFFKRGYSSRKIAIELGLSPRTVLKYIKYEGKMIH GSKGASKRSNLDPYKDTIIAMNLDRGTTMEIFRTICKEGYRGSYSNLKTFLAKHNKESGRRNRNPPTTPILERRHLITLL YKDISKLKESEQKKVRIYIEGNGDLQKVYSAIKEFRRILAQKDTNNLEKWIETTKTYSIPELNHFVHGIERDLPAVKNAA RLDDNNGLIEGIINKIKVIKRVMYGRCSFELLRLKVLML
Sequences:
>Translated_359_residues MVDRDTSQVVDIVAFRDTKDVTEWLKGYPDIEVVSRDGSISYAKAIEEAFPQAIQVSNRFHLVKNLTEEAKEYIKRTLPR KIKMSGMTEFPEENCLEPKNKCTRLEMLQMQREKEKNKKVQKVKKLFFKRGYSSRKIAIELGLSPRTVLKYIKYEGKMIH GSKGASKRSNLDPYKDTIIAMNLDRGTTMEIFRTICKEGYRGSYSNLKTFLAKHNKESGRRNRNPPTTPILERRHLITLL YKDISKLKESEQKKVRIYIEGNGDLQKVYSAIKEFRRILAQKDTNNLEKWIETTKTYSIPELNHFVHGIERDLPAVKNAA RLDDNNGLIEGIINKIKVIKRVMYGRCSFELLRLKVLML >Mature_359_residues MVDRDTSQVVDIVAFRDTKDVTEWLKGYPDIEVVSRDGSISYAKAIEEAFPQAIQVSNRFHLVKNLTEEAKEYIKRTLPR KIKMSGMTEFPEENCLEPKNKCTRLEMLQMQREKEKNKKVQKVKKLFFKRGYSSRKIAIELGLSPRTVLKYIKYEGKMIH GSKGASKRSNLDPYKDTIIAMNLDRGTTMEIFRTICKEGYRGSYSNLKTFLAKHNKESGRRNRNPPTTPILERRHLITLL YKDISKLKESEQKKVRIYIEGNGDLQKVYSAIKEFRRILAQKDTNNLEKWIETTKTYSIPELNHFVHGIERDLPAVKNAA RLDDNNGLIEGIINKIKVIKRVMYGRCSFELLRLKVLML
Specific function: Unknown
COG id: COG3464
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41812; Mature: 41812
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDRDTSQVVDIVAFRDTKDVTEWLKGYPDIEVVSRDGSISYAKAIEEAFPQAIQVSNRF CCCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH HLVKNLTEEAKEYIKRTLPRKIKMSGMTEFPEENCLEPKNKCTRLEMLQMQREKEKNKKV HHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH QKVKKLFFKRGYSSRKIAIELGLSPRTVLKYIKYEGKMIHGSKGASKRSNLDPYKDTIIA HHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCEEEE MNLDRGTTMEIFRTICKEGYRGSYSNLKTFLAKHNKESGRRNRNPPTTPILERRHLITLL EECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHH YKDISKLKESEQKKVRIYIEGNGDLQKVYSAIKEFRRILAQKDTNNLEKWIETTKTYSIP HHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC ELNHFVHGIERDLPAVKNAARLDDNNGLIEGIINKIKVIKRVMYGRCSFELLRLKVLML HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure MVDRDTSQVVDIVAFRDTKDVTEWLKGYPDIEVVSRDGSISYAKAIEEAFPQAIQVSNRF CCCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH HLVKNLTEEAKEYIKRTLPRKIKMSGMTEFPEENCLEPKNKCTRLEMLQMQREKEKNKKV HHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH QKVKKLFFKRGYSSRKIAIELGLSPRTVLKYIKYEGKMIHGSKGASKRSNLDPYKDTIIA HHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCEEEE MNLDRGTTMEIFRTICKEGYRGSYSNLKTFLAKHNKESGRRNRNPPTTPILERRHLITLL EECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHH YKDISKLKESEQKKVRIYIEGNGDLQKVYSAIKEFRRILAQKDTNNLEKWIETTKTYSIP HHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC ELNHFVHGIERDLPAVKNAARLDDNNGLIEGIINKIKVIKRVMYGRCSFELLRLKVLML HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA