| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239618159
Identifier: 239618159
GI number: 239618159
Start: 1919582
End: 1920745
Strand: Direct
Name: 239618159
Synonym: Kole_1792
Alternate gene names: NA
Gene position: 1919582-1920745 (Clockwise)
Preceding gene: 239618158
Following gene: 239618160
Centisome position: 83.38
GC content: 42.53
Gene sequence:
>1164_bases TTGCCGATTAGGGCAGGGGTGACAGTTAAACAACTGAATAAATATGGAGAAGAACTTTGTGGTGATACGGTAAAGATTAA GAAGATTTCTGGTGCGACTATCGTAGTCCTTTCAGATGGTTTGGGAAGCGGAGTTAAAGCGAGGATACTTTCTTCCCTGA CATGTGAGATAATCGTCACGCTTTTCGAACAGGGAATAGATTTAAAAGAAACGGTACATACTCTTGCTAAAACGCTTCCT GTGTGTAAAGTACGAGGAATAGCCTATTCAACCTTTACGATATGTATTGTTAATGAAGATGGCGAGGTTCGTATAATAAA TTACGATGGCCCACCGCCTGTGATTATAAAGCGTGGTCAATTGATAGATCCGCGAACTTTAGGAGCCTATAAAAACATTG AAGGCAGGAAGATTCTTGATGTTCGTTTTAAAGGAGACCCCGGAGACGCGATTTTCATGATGTCTGACGGTGTTTTACAT GCAGGCCTTGGAAACCTTATGAACTTTGGGTGGGGTTGGGAAAACGTCGCAGAATACCTGCGAAAAGCCTTTGTCAAATA TGATTCCTCCAGGAAAGCTGTGGAAAATGTGATGGAACTTACCAACAATTACTACGGCGGACAGCCTGGAGATGACTCAA CACTTGTTGGAATAAGAATAAAGGAAAAGAAGAATTTGGTGATATTTACCGGTCCGCCCCTTGATCCAGCGATGGATAGC TACGTTGTCAACCGCTTCCTTTCCCATAAAGACGCAACAAAGGTTGTGTGTGGCGGAACAACAGGAAATATTGTTGCCAG AGAGTTAGGACAGGAAATAGAGGTTGACCTTTCGACAATGCTTGATGACGTTCCTCCAGTGGGAAAGTTGGAAGGAGTTG ATCTTGTCGCTGAAGGTGTTCTCACATTGAAAAAAGTGATAGCCATTCTTAAGAAATATGGTGTGGATGCTGAGAGCATC CCTCATGGCAAGGATGGAGCCACCCTGATGGCGAGGATGCTAGCAGAAAGTGAAGAAATAACTCTAATGGTTGGCCAAAG AATAAATCCATTTTATCAGAATCCTTCTCTTCCCTTTGACATGTCAGTAAGGCATAATCTTATTACTGAGCTCGTTTCAA TTCTAGAAAAAGCCGGGAAGAAAGTTACGGTCGAATATTTTTAG
Upstream 100 bases:
>100_bases AGATTGCTCAGGAAATAGCTTCCATACTTGGTGAAACGGTTGCAGAGACTAAGGCTCAGCTTATTAAGCTCAGGGACCTG ATTACCCGGGAGTGATTGCG
Downstream 100 bases:
>100_bases GGGGTGCCATAATGAAAGTCAAAGTATGTGTCGGAACGATGTGTCATTTGATGGGAGCCAGTGAAATATTGACTGTGATA CAGGAAATCGCCGATAATGA
Product: protein serine/threonine phosphatase
Products: NA
Alternate protein names: Stage II Sporulation E Family Protein; Serine Phosphatase; Stage II Sporulation Protein E; Sigma Factor PP2C-Like Phosphatase; Serine/Threonine Specific Protein Phosphatase; Sporulation Domain Protein
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MPIRAGVTVKQLNKYGEELCGDTVKIKKISGATIVVLSDGLGSGVKARILSSLTCEIIVTLFEQGIDLKETVHTLAKTLP VCKVRGIAYSTFTICIVNEDGEVRIINYDGPPPVIIKRGQLIDPRTLGAYKNIEGRKILDVRFKGDPGDAIFMMSDGVLH AGLGNLMNFGWGWENVAEYLRKAFVKYDSSRKAVENVMELTNNYYGGQPGDDSTLVGIRIKEKKNLVIFTGPPLDPAMDS YVVNRFLSHKDATKVVCGGTTGNIVARELGQEIEVDLSTMLDDVPPVGKLEGVDLVAEGVLTLKKVIAILKKYGVDAESI PHGKDGATLMARMLAESEEITLMVGQRINPFYQNPSLPFDMSVRHNLITELVSILEKAGKKVTVEYF
Sequences:
>Translated_387_residues MPIRAGVTVKQLNKYGEELCGDTVKIKKISGATIVVLSDGLGSGVKARILSSLTCEIIVTLFEQGIDLKETVHTLAKTLP VCKVRGIAYSTFTICIVNEDGEVRIINYDGPPPVIIKRGQLIDPRTLGAYKNIEGRKILDVRFKGDPGDAIFMMSDGVLH AGLGNLMNFGWGWENVAEYLRKAFVKYDSSRKAVENVMELTNNYYGGQPGDDSTLVGIRIKEKKNLVIFTGPPLDPAMDS YVVNRFLSHKDATKVVCGGTTGNIVARELGQEIEVDLSTMLDDVPPVGKLEGVDLVAEGVLTLKKVIAILKKYGVDAESI PHGKDGATLMARMLAESEEITLMVGQRINPFYQNPSLPFDMSVRHNLITELVSILEKAGKKVTVEYF >Mature_386_residues PIRAGVTVKQLNKYGEELCGDTVKIKKISGATIVVLSDGLGSGVKARILSSLTCEIIVTLFEQGIDLKETVHTLAKTLPV CKVRGIAYSTFTICIVNEDGEVRIINYDGPPPVIIKRGQLIDPRTLGAYKNIEGRKILDVRFKGDPGDAIFMMSDGVLHA GLGNLMNFGWGWENVAEYLRKAFVKYDSSRKAVENVMELTNNYYGGQPGDDSTLVGIRIKEKKNLVIFTGPPLDPAMDSY VVNRFLSHKDATKVVCGGTTGNIVARELGQEIEVDLSTMLDDVPPVGKLEGVDLVAEGVLTLKKVIAILKKYGVDAESIP HGKDGATLMARMLAESEEITLMVGQRINPFYQNPSLPFDMSVRHNLITELVSILEKAGKKVTVEYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42320; Mature: 42189
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRAGVTVKQLNKYGEELCGDTVKIKKISGATIVVLSDGLGSGVKARILSSLTCEIIVT CCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHH LFEQGIDLKETVHTLAKTLPVCKVRGIAYSTFTICIVNEDGEVRIINYDGPPPVIIKRGQ HHHCCCCHHHHHHHHHHHCCHHHCCCEEEEEEEEEEECCCCCEEEEEECCCCCEEEECCC LIDPRTLGAYKNIEGRKILDVRFKGDPGDAIFMMSDGVLHAGLGNLMNFGWGWENVAEYL CCCCHHCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCHHHCHHHHHHCCCCHHHHHHHH RKAFVKYDSSRKAVENVMELTNNYYGGQPGDDSTLVGIRIKEKKNLVIFTGPPLDPAMDS HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHH YVVNRFLSHKDATKVVCGGTTGNIVARELGQEIEVDLSTMLDDVPPVGKLEGVDLVAEGV HHHHHHHCCCCCCEEEECCCCCHHHHHHCCCHHEEEHHHHHHCCCCCCCCCCHHHHHHHH LTLKKVIAILKKYGVDAESIPHGKDGATLMARMLAESEEITLMVGQRINPFYQNPSLPFD HHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC MSVRHNLITELVSILEKAGKKVTVEYF HHHHHHHHHHHHHHHHHCCCEEEEEEC >Mature Secondary Structure PIRAGVTVKQLNKYGEELCGDTVKIKKISGATIVVLSDGLGSGVKARILSSLTCEIIVT CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHH LFEQGIDLKETVHTLAKTLPVCKVRGIAYSTFTICIVNEDGEVRIINYDGPPPVIIKRGQ HHHCCCCHHHHHHHHHHHCCHHHCCCEEEEEEEEEEECCCCCEEEEEECCCCCEEEECCC LIDPRTLGAYKNIEGRKILDVRFKGDPGDAIFMMSDGVLHAGLGNLMNFGWGWENVAEYL CCCCHHCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCHHHCHHHHHHCCCCHHHHHHHH RKAFVKYDSSRKAVENVMELTNNYYGGQPGDDSTLVGIRIKEKKNLVIFTGPPLDPAMDS HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHH YVVNRFLSHKDATKVVCGGTTGNIVARELGQEIEVDLSTMLDDVPPVGKLEGVDLVAEGV HHHHHHHCCCCCCEEEECCCCCHHHHHHCCCHHEEEHHHHHHCCCCCCCCCCHHHHHHHH LTLKKVIAILKKYGVDAESIPHGKDGATLMARMLAESEEITLMVGQRINPFYQNPSLPFD HHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC MSVRHNLITELVSILEKAGKKVTVEYF HHHHHHHHHHHHHHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA