Click here to switch to the map view.

The map label for this gene is nisX1 [H]

Identifier: 239618154

GI number: 239618154

Start: 1916500

End: 1917399

Strand: Direct

Name: nisX1 [H]

Synonym: Kole_1787

Alternate gene names: 239618154

Gene position: 1916500-1917399 (Clockwise)

Preceding gene: 239618153

Following gene: 239618155

Centisome position: 83.25

GC content: 37.78

Gene sequence:

>900_bases
ATAAATTGGGGGTTTCGTGTAAGCTTCGTTCTTGAAGTTTTAGAGATACCAAGGAGTAGCTATTACAGGAGCAAGAATCC
GGGCTTTTTCCTGAAAGGCAGGAGAGGAAGAAAGGAAAGAGGTTATGCCTTTAATGTTTTTGGAGGTATCACAAAAGACG
AAGAGATAGAAAAACTGCTGCTGTGGTTTAATGCGATCGAATCTCCTTTACAAGAGGAATATTATTTGAAGTACATGGGT
TCAAAAAAGATAGCCAGATATATCCGGAACGTATACGGAATCATAGTAAATCACAAGAAATTGCACCGACTCAGGAAAAA
GCTCGGACTTGTTGGGAAGTACAAAAGGCGTGAAAGGCATCCATACACTCGAAGCCGTTCAATAACAGTGACAAAAGCGA
ACCAATTGTGGGAAGCGGATATAACATTCGTAAAAACACGTGAAGATGGGAATGCAGCGATACTGAACATAATAGACGTG
TATGACAGAAGCATAGTGGGAACATATGTAGGTAAAAGCTGCAAAAAGGAACATTTCATTCAATTAATGAAAATAGCGAT
CACAAAAAGAGCAAAACCACAAATAATAAGAACGGATAACGGAAGCCAATTTAAAGCATTAGATACGGGAATATACATGA
ATGAAGAAAATATAATCCATGAATTTGGAATAGTAAGGAATCCGGATTCGCAAGCATTTATTGAATCGTCATTCTCTTCT
TTGAAAAGGGAATTCGTAAGAAACAACGAATTCAAGAATCTTGAAGACTTGTGTGAAAAACTAAAGGTATATCTGTCTTT
TTACAACAACCTGAGACCTCATGGGTCATTGAAATACCAAACACCAAGATACTATACTGAATTCTCCAGCCAAAACGAGC
CTGTGTACGTAAATCCTTGA

Upstream 100 bases:

>100_bases
GAATAAGAATACTCAAGGAAAAATTAAAAAAAACGAACATGGAAGAGAACCAGGGAAAAAAGTAACAGATATTACGATCC
TCTGTATTGCTAATAAGTAC

Downstream 100 bases:

>100_bases
TGTTGGTCTGTTTTTGTCCAATATTTGGGGGTCAAGCCGTCGAGAACCATTAATGTAGGGGTACAGCATGCTGTGCCCTT
TAGTCAGCGGTGTAGCCACT

Product: Integrase catalytic region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MNWGFRVSFVLEVLEIPRSSYYRSKNPGFFLKGRRGRKERGYAFNVFGGITKDEEIEKLLLWFNAIESPLQEEYYLKYMG
SKKIARYIRNVYGIIVNHKKLHRLRKKLGLVGKYKRRERHPYTRSRSITVTKANQLWEADITFVKTREDGNAAILNIIDV
YDRSIVGTYVGKSCKKEHFIQLMKIAITKRAKPQIIRTDNGSQFKALDTGIYMNEENIIHEFGIVRNPDSQAFIESSFSS
LKREFVRNNEFKNLEDLCEKLKVYLSFYNNLRPHGSLKYQTPRYYTEFSSQNEPVYVNP

Sequences:

>Translated_299_residues
MNWGFRVSFVLEVLEIPRSSYYRSKNPGFFLKGRRGRKERGYAFNVFGGITKDEEIEKLLLWFNAIESPLQEEYYLKYMG
SKKIARYIRNVYGIIVNHKKLHRLRKKLGLVGKYKRRERHPYTRSRSITVTKANQLWEADITFVKTREDGNAAILNIIDV
YDRSIVGTYVGKSCKKEHFIQLMKIAITKRAKPQIIRTDNGSQFKALDTGIYMNEENIIHEFGIVRNPDSQAFIESSFSS
LKREFVRNNEFKNLEDLCEKLKVYLSFYNNLRPHGSLKYQTPRYYTEFSSQNEPVYVNP
>Mature_299_residues
MNWGFRVSFVLEVLEIPRSSYYRSKNPGFFLKGRRGRKERGYAFNVFGGITKDEEIEKLLLWFNAIESPLQEEYYLKYMG
SKKIARYIRNVYGIIVNHKKLHRLRKKLGLVGKYKRRERHPYTRSRSITVTKANQLWEADITFVKTREDGNAAILNIIDV
YDRSIVGTYVGKSCKKEHFIQLMKIAITKRAKPQIIRTDNGSQFKALDTGIYMNEENIIHEFGIVRNPDSQAFIESSFSS
LKREFVRNNEFKNLEDLCEKLKVYLSFYNNLRPHGSLKYQTPRYYTEFSSQNEPVYVNP

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 35278; Mature: 35278

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWGFRVSFVLEVLEIPRSSYYRSKNPGFFLKGRRGRKERGYAFNVFGGITKDEEIEKLL
CCCCHHHHHHHHHHHCCHHHHCCCCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHH
LWFNAIESPLQEEYYLKYMGSKKIARYIRNVYGIIVNHKKLHRLRKKLGLVGKYKRRERH
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCC
PYTRSRSITVTKANQLWEADITFVKTREDGNAAILNIIDVYDRSIVGTYVGKSCKKEHFI
CCCCCCEEEEEECCCEEECCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHH
QLMKIAITKRAKPQIIRTDNGSQFKALDTGIYMNEENIIHEFGIVRNPDSQAFIESSFSS
HHHHHHHHCCCCCCEEECCCCCEEEEEECCEEECCCHHHHHHCCEECCCHHHHHHHHHHH
LKREFVRNNEFKNLEDLCEKLKVYLSFYNNLRPHGSLKYQTPRYYTEFSSQNEPVYVNP
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHCCCCCCCEEECC
>Mature Secondary Structure
MNWGFRVSFVLEVLEIPRSSYYRSKNPGFFLKGRRGRKERGYAFNVFGGITKDEEIEKLL
CCCCHHHHHHHHHHHCCHHHHCCCCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHH
LWFNAIESPLQEEYYLKYMGSKKIARYIRNVYGIIVNHKKLHRLRKKLGLVGKYKRRERH
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCC
PYTRSRSITVTKANQLWEADITFVKTREDGNAAILNIIDVYDRSIVGTYVGKSCKKEHFI
CCCCCCEEEEEECCCEEECCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHHHH
QLMKIAITKRAKPQIIRTDNGSQFKALDTGIYMNEENIIHEFGIVRNPDSQAFIESSFSS
HHHHHHHHCCCCCCEEECCCCCEEEEEECCEEECCCHHHHHHCCEECCCHHHHHHHHHHH
LKREFVRNNEFKNLEDLCEKLKVYLSFYNNLRPHGSLKYQTPRYYTEFSSQNEPVYVNP
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]