| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617946
Identifier: 239617946
GI number: 239617946
Start: 1687268
End: 1688944
Strand: Direct
Name: 239617946
Synonym: Kole_1574
Alternate gene names: NA
Gene position: 1687268-1688944 (Clockwise)
Preceding gene: 239617945
Following gene: 239617947
Centisome position: 73.29
GC content: 40.85
Gene sequence:
>1677_bases ATGCGCAGATCAGTTATAATAATTCTTCTCGTTTTTTGTGCGGTCATCTCGATTGGTAAGGATGTTGTTTTTTCTCTCGA GAATAGAACCCTGAAAATAACTGACAATGACGTTCTCCAGAGTTATGACAACATCTTTATCTCTGTGGATTCTCTTGGAA GACTATATAACAACATTTTAATCACAGAAGCAGAGGATTCTGATGAATTCTTCATATTTTTTCCGGGGAATTCATTGGTA ACGTTTTCATTGGTTGATGGTTCCGCAACGGTGGAGTTTGGTAGCAAATTCCATAATGCGGCAACGAAGCGTGACGATAA GAATTACGTTAGCCTCTCTTTTTTATGCACACTATTGAACCTGAATTGTGTTGATACCGAAAAAACGATGATCGTGTACG ATGTTCCACCTAAAATCGAGAACATATCAAAAACTCCGCAGGGGCTTGTTTTTTATCTGGACAGACCTGCATTCCCTGAA ATGTTCAGTTATTGGCATACCACCAGTGGCGCCTTAGTAATAACCATAAAGCCGGCTGTTAAAGGGGACAAGCTTGAACT TCCCGGCAGCCAAATCTTTACAGGAACCAACTATGTTAAGCTGTATATGAATACAGCTTCGTGGTCAGATCTTTCCGTTG AGGTTTCGGAGAATAAACTCATCGTAAACAGTAGATGGAGCCTCGGAAGGATACTAAAGAAAGATTCGGGGGCAGGATAT TTTCTTGGTGTATTCGAAAATTATGTTTCCGGGAGAAGGATAATATTAACTGCTTTGGAACTTGATCCCGAAAGATTCGA TATACATCCAGTGCTTGCAAATGGGCGTATTCCTTCCGGGGAATCTCTTCTGTCCATGGCAAAGAGATACGATGCTTTTG CGGTGATAAACGGAGGATATTTTGATCCCTCCAGCTTTTATCCTATCGGGTTACTCATCGAGGATGGGAAGTTAATCAGC TTACCATCCCTTGAACGGCCGTTGTTTTTCCAGACAGAGGATGGAAAGATGGGAATAGGAAGGCTTGATACCCTCCTCTT CCTATCAATTGGGAATGTTACCCTTCAGGTAAAAGGAGTGAATACACCCTATCGTGGTTCTGTGGTTGTTTATACAAGGG AATTTTCCGGGAAACTGCCGTATCACGAGGACTATGTGTATGCATTTCTTGATGGTGAAACCATCAGTAGTATTGGTTAC AAGGAACAGATAGAAGGTAATGAAAGTGTTATCCTCTTTTCTCCAGCAGCCATGGAGAAGATAGAAAAACTCGAACCAGG AATGAAGGTTAAATTTACGTTCTTCAATTCCTTTAACGAAAAATTGAAATTTGCCATAGAAGGGGGACCGCTGATTATTT CGCGCGGGAAACCTGTTACAGAATATGAGAAGAGTTTCTATTCCTCTTCTCTTCTCGATATAAGAGCTCCAAGAACACTA ATAGGGATCACAAAAAGCGGTACTTTGATGTTCATGATAATAGACGGTTACCAGATGAAGAGCTATGGATTAACTTTTAA AGAGATGGTAGAATTCTTTACAGACAAAAATTTTGAATATCTCATGTGTGTGGATGGAGGGAAATCGTCCGCATTGGTTT TCAAAGGAGAGGTTTTCAGCTCTCCTTCTTCGGGTGTTCCCGTCGTTCCTGTGGGAATAGTTATAAGTCAAAAATAG
Upstream 100 bases:
>100_bases AAAGCAAAGGAACTATTTTTAGAAGCGTACAAGATTTCTGATGCTCCAATTGAACCACCATCTCTGGTACATGAGATTTT TTAAGGGGTTTGTGTAAGAT
Downstream 100 bases:
>100_bases AGTTCTGGAGGTGGAAGAAATGGGGAAAGTACCAGTTGAAGCCAAAAGAAACGTAACCTTGATAGGACATCATGGTTCAG GAAAAACACATCTCGTTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: SpoIID/LytB Domain Protein; Sporulation Domain-Containing Protein; Copper Amine Oxidase Domain-Containing Protein
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MRRSVIIILLVFCAVISIGKDVVFSLENRTLKITDNDVLQSYDNIFISVDSLGRLYNNILITEAEDSDEFFIFFPGNSLV TFSLVDGSATVEFGSKFHNAATKRDDKNYVSLSFLCTLLNLNCVDTEKTMIVYDVPPKIENISKTPQGLVFYLDRPAFPE MFSYWHTTSGALVITIKPAVKGDKLELPGSQIFTGTNYVKLYMNTASWSDLSVEVSENKLIVNSRWSLGRILKKDSGAGY FLGVFENYVSGRRIILTALELDPERFDIHPVLANGRIPSGESLLSMAKRYDAFAVINGGYFDPSSFYPIGLLIEDGKLIS LPSLERPLFFQTEDGKMGIGRLDTLLFLSIGNVTLQVKGVNTPYRGSVVVYTREFSGKLPYHEDYVYAFLDGETISSIGY KEQIEGNESVILFSPAAMEKIEKLEPGMKVKFTFFNSFNEKLKFAIEGGPLIISRGKPVTEYEKSFYSSSLLDIRAPRTL IGITKSGTLMFMIIDGYQMKSYGLTFKEMVEFFTDKNFEYLMCVDGGKSSALVFKGEVFSSPSSGVPVVPVGIVISQK
Sequences:
>Translated_558_residues MRRSVIIILLVFCAVISIGKDVVFSLENRTLKITDNDVLQSYDNIFISVDSLGRLYNNILITEAEDSDEFFIFFPGNSLV TFSLVDGSATVEFGSKFHNAATKRDDKNYVSLSFLCTLLNLNCVDTEKTMIVYDVPPKIENISKTPQGLVFYLDRPAFPE MFSYWHTTSGALVITIKPAVKGDKLELPGSQIFTGTNYVKLYMNTASWSDLSVEVSENKLIVNSRWSLGRILKKDSGAGY FLGVFENYVSGRRIILTALELDPERFDIHPVLANGRIPSGESLLSMAKRYDAFAVINGGYFDPSSFYPIGLLIEDGKLIS LPSLERPLFFQTEDGKMGIGRLDTLLFLSIGNVTLQVKGVNTPYRGSVVVYTREFSGKLPYHEDYVYAFLDGETISSIGY KEQIEGNESVILFSPAAMEKIEKLEPGMKVKFTFFNSFNEKLKFAIEGGPLIISRGKPVTEYEKSFYSSSLLDIRAPRTL IGITKSGTLMFMIIDGYQMKSYGLTFKEMVEFFTDKNFEYLMCVDGGKSSALVFKGEVFSSPSSGVPVVPVGIVISQK >Mature_558_residues MRRSVIIILLVFCAVISIGKDVVFSLENRTLKITDNDVLQSYDNIFISVDSLGRLYNNILITEAEDSDEFFIFFPGNSLV TFSLVDGSATVEFGSKFHNAATKRDDKNYVSLSFLCTLLNLNCVDTEKTMIVYDVPPKIENISKTPQGLVFYLDRPAFPE MFSYWHTTSGALVITIKPAVKGDKLELPGSQIFTGTNYVKLYMNTASWSDLSVEVSENKLIVNSRWSLGRILKKDSGAGY FLGVFENYVSGRRIILTALELDPERFDIHPVLANGRIPSGESLLSMAKRYDAFAVINGGYFDPSSFYPIGLLIEDGKLIS LPSLERPLFFQTEDGKMGIGRLDTLLFLSIGNVTLQVKGVNTPYRGSVVVYTREFSGKLPYHEDYVYAFLDGETISSIGY KEQIEGNESVILFSPAAMEKIEKLEPGMKVKFTFFNSFNEKLKFAIEGGPLIISRGKPVTEYEKSFYSSSLLDIRAPRTL IGITKSGTLMFMIIDGYQMKSYGLTFKEMVEFFTDKNFEYLMCVDGGKSSALVFKGEVFSSPSSGVPVVPVGIVISQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62249; Mature: 62249
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSVIIILLVFCAVISIGKDVVFSLENRTLKITDNDVLQSYDNIFISVDSLGRLYNNIL CCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCHHHHCCCCEEEEEHHHHHHHCCEE ITEAEDSDEFFIFFPGNSLVTFSLVDGSATVEFGSKFHNAATKRDDKNYVSLSFLCTLLN EEECCCCCCEEEEECCCCEEEEEEECCCEEEECCHHHHHHHCCCCCCCEEEHHHHHHHHC LNCVDTEKTMIVYDVPPKIENISKTPQGLVFYLDRPAFPEMFSYWHTTSGALVITIKPAV CEEECCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCEEEEEEECCC KGDKLELPGSQIFTGTNYVKLYMNTASWSDLSVEVSENKLIVNSRWSLGRILKKDSGAGY CCCEEECCCCEEEECCCEEEEEEECCCCCEEEEEECCCEEEEECCCCHHHHHCCCCCCEE FLGVFENYVSGRRIILTALELDPERFDIHPVLANGRIPSGESLLSMAKRYDAFAVINGGY EEEEHHHHCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHCCEEEEEECCE FDPSSFYPIGLLIEDGKLISLPSLERPLFFQTEDGKMGIGRLDTLLFLSIGNVTLQVKGV ECCCCCCEEEEEEECCCEEECCCCCCCEEEEECCCCCCCCHHCEEEEEEECCEEEEEEEC NTPYRGSVVVYTREFSGKLPYHEDYVYAFLDGETISSIGYKEQIEGNESVILFSPAAMEK CCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCHHHCCCHHHCCCCCEEEEECCHHHHH IEKLEPGMKVKFTFFNSFNEKLKFAIEGGPLIISRGKPVTEYEKSFYSSSLLDIRAPRTL HHHCCCCCEEEEEEECCCCCEEEEEECCCCEEEECCCCCHHHHHHHHCCCEEEECCCCEE IGITKSGTLMFMIIDGYQMKSYGLTFKEMVEFFTDKNFEYLMCVDGGKSSALVFKGEVFS EEEECCCEEEEEEEECEEEEECCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEEECEEEC SPSSGVPVVPVGIVISQK CCCCCCCEEEEEEEEECC >Mature Secondary Structure MRRSVIIILLVFCAVISIGKDVVFSLENRTLKITDNDVLQSYDNIFISVDSLGRLYNNIL CCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCHHHHCCCCEEEEEHHHHHHHCCEE ITEAEDSDEFFIFFPGNSLVTFSLVDGSATVEFGSKFHNAATKRDDKNYVSLSFLCTLLN EEECCCCCCEEEEECCCCEEEEEEECCCEEEECCHHHHHHHCCCCCCCEEEHHHHHHHHC LNCVDTEKTMIVYDVPPKIENISKTPQGLVFYLDRPAFPEMFSYWHTTSGALVITIKPAV CEEECCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCEEEEEEECCC KGDKLELPGSQIFTGTNYVKLYMNTASWSDLSVEVSENKLIVNSRWSLGRILKKDSGAGY CCCEEECCCCEEEECCCEEEEEEECCCCCEEEEEECCCEEEEECCCCHHHHHCCCCCCEE FLGVFENYVSGRRIILTALELDPERFDIHPVLANGRIPSGESLLSMAKRYDAFAVINGGY EEEEHHHHCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHCCEEEEEECCE FDPSSFYPIGLLIEDGKLISLPSLERPLFFQTEDGKMGIGRLDTLLFLSIGNVTLQVKGV ECCCCCCEEEEEEECCCEEECCCCCCCEEEEECCCCCCCCHHCEEEEEEECCEEEEEEEC NTPYRGSVVVYTREFSGKLPYHEDYVYAFLDGETISSIGYKEQIEGNESVILFSPAAMEK CCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCHHHCCCHHHCCCCCEEEEECCHHHHH IEKLEPGMKVKFTFFNSFNEKLKFAIEGGPLIISRGKPVTEYEKSFYSSSLLDIRAPRTL HHHCCCCCEEEEEEECCCCCEEEEEECCCCEEEECCCCCHHHHHHHHCCCEEEECCCCEE IGITKSGTLMFMIIDGYQMKSYGLTFKEMVEFFTDKNFEYLMCVDGGKSSALVFKGEVFS EEEECCCEEEEEEEECEEEEECCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEEECEEEC SPSSGVPVVPVGIVISQK CCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA