| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617787
Identifier: 239617787
GI number: 239617787
Start: 1505680
End: 1507035
Strand: Direct
Name: 239617787
Synonym: Kole_1412
Alternate gene names: NA
Gene position: 1505680-1507035 (Clockwise)
Preceding gene: 239617785
Following gene: 239617792
Centisome position: 65.4
GC content: 41.0
Gene sequence:
>1356_bases ATGGATGGAAGCTGGGATCTTGTTATGGATTTCATGTATCTTTCTTTTCTTCTTGGTCTTTCTGCTGTCATTAAACGGAG CATTCCGGGAATGAGAAAATTACTCATTCCAAATTCAATCATCGCTGGCTTTTTAGCGGTGTTGTTTGGCCCTGATGTTC TTGGGATTTTCAACTTCAATAGCGATAATCTTGGGTTCATGATATACCATATGCTCGCAATAGGTTTTATAGCAGTTGCC TTGAAGAAAAGTAATTCAAAACTTTCCAAAACCGGGTTCAATACCGGGTTGATAATTACGATGTCTTTGACGATTCAAGC TATCGCTGGCTTTGCTGTAAGTCTATTTCTCTATTATCTTATTACAAAGGATGTATTCCCGTTAATGGGGCTTTTGTTGC CTCTTGCATTTGACCAGGGACCCGGCCAGGCCTTTTCGATAGGGTCACAATGGGAAGCACTTGGTTTTCGTTCGGGTGGG GCAATAGGGCTTGTGATGGCTACCATAGGATTTCTCTGGGCTACCATCGGAGGAATATTTCTTTTGAATATCATTGTTTT CTTTAAGAAAAAGAGCAAGCTCGTATCTGAAAAAAAGTTTATCAAAAAAAGTGTTGTTTCAACAGTAAGGGATTACGAGT TTTCGGACATAGACGGTATGACTATTCAGTTACTGGCAATTGGTATCGTTTACCTGGTTACCTTTGGTTTTATAAAATGG ATAACAGCAGTTCTTGGTATCGGCGGCAACTCTTATGGCGAGACGTTTGCCCGGGTTCTCTGGGGATTACACTTTGTCGT GGGCGTGCTGTTCGCGTTTTTATTCAGGAAAGTCTACGATTTTCTAAGAAGAGATGAGAAATACACAACACAGTATCTGA ATGACTTTCTTCTTCAAAGAATTGCCGGTGCGGTGTTCGACTATATGGTTGCTGCATCGATTGCAGCCATACCGCTTAAA ATGGTGAAAGAGAATTTTGTTCCAATTCTTCTGATAACCACCATTGGAGGGGTTCTTACTGTTTTTTACACAATCTGGTT CAGTAAAAGAACGTACAGGGAATCGGTACTGGAAAACACCCTCGCGCTTTTTGGAATGGAAACCGGTACAATATCTACGG GTATGGCACTTCTCAGGGAGATAGACCCAAACTTTGAAAGCGGTGCGGCTGAAAATATGGTTCTTGGCAGCGGGGTGGCC TTGATTTTCGGGATTCCATTGTTGGTGATCATTAATATTCCGATTATCGGGATAAAGACGAATAATCCAACATATTTCTT CTATACTCTTCTTGCCCTTGGTGTGTATCTTTTAGCGATCTTTTTTACTTGGTATTTAAGCGTTAGGAGAAAATAA
Upstream 100 bases:
>100_bases ACATTATTATAATAGTATAGGTTCATGGTATCACGAAACCGGGAAAGATCAATCTGTATAAATCAATTTGAGGTTGCACC TGATAGGGGGGTAACAAAGC
Downstream 100 bases:
>100_bases AAAACCGGGCTCTAAAGCCCGGTTTTTTATTCCATGTCTATTATATCAGTAAGTTACTCCCGCCAGGTGAAGTTCTCCAC GTTTACCATCGGGTCCTTCA
Product: Na+/glutamate symporter-like protein
Products: NA
Alternate protein names: Na+/Glutamate Symporter-Like Protein; Integral Membrane Protein; Na+/Glutamate Symporter
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MDGSWDLVMDFMYLSFLLGLSAVIKRSIPGMRKLLIPNSIIAGFLAVLFGPDVLGIFNFNSDNLGFMIYHMLAIGFIAVA LKKSNSKLSKTGFNTGLIITMSLTIQAIAGFAVSLFLYYLITKDVFPLMGLLLPLAFDQGPGQAFSIGSQWEALGFRSGG AIGLVMATIGFLWATIGGIFLLNIIVFFKKKSKLVSEKKFIKKSVVSTVRDYEFSDIDGMTIQLLAIGIVYLVTFGFIKW ITAVLGIGGNSYGETFARVLWGLHFVVGVLFAFLFRKVYDFLRRDEKYTTQYLNDFLLQRIAGAVFDYMVAASIAAIPLK MVKENFVPILLITTIGGVLTVFYTIWFSKRTYRESVLENTLALFGMETGTISTGMALLREIDPNFESGAAENMVLGSGVA LIFGIPLLVIINIPIIGIKTNNPTYFFYTLLALGVYLLAIFFTWYLSVRRK
Sequences:
>Translated_451_residues MDGSWDLVMDFMYLSFLLGLSAVIKRSIPGMRKLLIPNSIIAGFLAVLFGPDVLGIFNFNSDNLGFMIYHMLAIGFIAVA LKKSNSKLSKTGFNTGLIITMSLTIQAIAGFAVSLFLYYLITKDVFPLMGLLLPLAFDQGPGQAFSIGSQWEALGFRSGG AIGLVMATIGFLWATIGGIFLLNIIVFFKKKSKLVSEKKFIKKSVVSTVRDYEFSDIDGMTIQLLAIGIVYLVTFGFIKW ITAVLGIGGNSYGETFARVLWGLHFVVGVLFAFLFRKVYDFLRRDEKYTTQYLNDFLLQRIAGAVFDYMVAASIAAIPLK MVKENFVPILLITTIGGVLTVFYTIWFSKRTYRESVLENTLALFGMETGTISTGMALLREIDPNFESGAAENMVLGSGVA LIFGIPLLVIINIPIIGIKTNNPTYFFYTLLALGVYLLAIFFTWYLSVRRK >Mature_451_residues MDGSWDLVMDFMYLSFLLGLSAVIKRSIPGMRKLLIPNSIIAGFLAVLFGPDVLGIFNFNSDNLGFMIYHMLAIGFIAVA LKKSNSKLSKTGFNTGLIITMSLTIQAIAGFAVSLFLYYLITKDVFPLMGLLLPLAFDQGPGQAFSIGSQWEALGFRSGG AIGLVMATIGFLWATIGGIFLLNIIVFFKKKSKLVSEKKFIKKSVVSTVRDYEFSDIDGMTIQLLAIGIVYLVTFGFIKW ITAVLGIGGNSYGETFARVLWGLHFVVGVLFAFLFRKVYDFLRRDEKYTTQYLNDFLLQRIAGAVFDYMVAASIAAIPLK MVKENFVPILLITTIGGVLTVFYTIWFSKRTYRESVLENTLALFGMETGTISTGMALLREIDPNFESGAAENMVLGSGVA LIFGIPLLVIINIPIIGIKTNNPTYFFYTLLALGVYLLAIFFTWYLSVRRK
Specific function: Unknown
COG id: COG0786
COG function: function code E; Na+/glutamate symporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49972; Mature: 49972
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGSWDLVMDFMYLSFLLGLSAVIKRSIPGMRKLLIPNSIIAGFLAVLFGPDVLGIFNFN CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHCCCEEEEEECC SDNLGFMIYHMLAIGFIAVALKKSNSKLSKTGFNTGLIITMSLTIQAIAGFAVSLFLYYL CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH ITKDVFPLMGLLLPLAFDQGPGQAFSIGSQWEALGFRSGGAIGLVMATIGFLWATIGGIF HHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH LLNIIVFFKKKSKLVSEKKFIKKSVVSTVRDYEFSDIDGMTIQLLAIGIVYLVTFGFIKW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ITAVLGIGGNSYGETFARVLWGLHFVVGVLFAFLFRKVYDFLRRDEKYTTQYLNDFLLQR HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH IAGAVFDYMVAASIAAIPLKMVKENFVPILLITTIGGVLTVFYTIWFSKRTYRESVLENT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALFGMETGTISTGMALLREIDPNFESGAAENMVLGSGVALIFGIPLLVIINIPIIGIKT HHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCEEEEEC NNPTYFFYTLLALGVYLLAIFFTWYLSVRRK CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDGSWDLVMDFMYLSFLLGLSAVIKRSIPGMRKLLIPNSIIAGFLAVLFGPDVLGIFNFN CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHCCCEEEEEECC SDNLGFMIYHMLAIGFIAVALKKSNSKLSKTGFNTGLIITMSLTIQAIAGFAVSLFLYYL CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH ITKDVFPLMGLLLPLAFDQGPGQAFSIGSQWEALGFRSGGAIGLVMATIGFLWATIGGIF HHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH LLNIIVFFKKKSKLVSEKKFIKKSVVSTVRDYEFSDIDGMTIQLLAIGIVYLVTFGFIKW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ITAVLGIGGNSYGETFARVLWGLHFVVGVLFAFLFRKVYDFLRRDEKYTTQYLNDFLLQR HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH IAGAVFDYMVAASIAAIPLKMVKENFVPILLITTIGGVLTVFYTIWFSKRTYRESVLENT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALFGMETGTISTGMALLREIDPNFESGAAENMVLGSGVALIFGIPLLVIINIPIIGIKT HHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCEEEEEC NNPTYFFYTLLALGVYLLAIFFTWYLSVRRK CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA