| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617780
Identifier: 239617780
GI number: 239617780
Start: 1497439
End: 1498077
Strand: Reverse
Name: 239617780
Synonym: Kole_1405
Alternate gene names: NA
Gene position: 1498077-1497439 (Counterclockwise)
Preceding gene: 239617781
Following gene: 239617779
Centisome position: 65.07
GC content: 38.34
Gene sequence:
>639_bases ATGTTGATACGCTGGCACGGTCACGCTTGTTTTACGATAGAAAGTGCAGGTAAAACACTTCTCACCGATCCTTTTGATTC AAGTGTCGGGTACGCTATTCCAGATATTGAACCAGATATAGTCACAGAAAGCCATCAACACTTTGATCACAACGCTCATC ATTTACTAAAAGGCAATTTTAACCTAATCAAAGAAACGGGGCACTTTTTCGTTGAAGGATACAGAATTAACGGATTTCTA ACCTATCATGATGAGTTCAAAGGCAAAAAACGCGGCACAAATATCATCTATGAAATCATAACTCCTGACGGGTTTAGAAT CGTTCATCTTGGAGATCTGGGAGAATCTCTAAGCAGGGAGCTGGAACAGAAGCTAATGCACCCTGATATTCTTATGATTC CCGTTGGAGGAATTTACACAATAGGACCAAAAGAGGCCCATAATCTGGCAAACGAGTTGAAACCATCAATTGTAATTCCG ATGCATTTCAAAACAAAAAACCTAAAATTCGAGCTAAAGGAACTGGAGAATTTCACAAGTAAATTCGAAAATGTTGAAAA AATGAAGGAGCTCAACCTTAATTCCAGGAAAGAAGTCGAAAATCTCCATTTGAAAGTAATTGTTTTAGACTACGAATAG
Upstream 100 bases:
>100_bases ATAAGCTACAAATTTCAAAGGTAGCTCATTTAATTTTCATAACGGTTGGTACAATACCGTATTTGAGAAGCGTGCTATAA TTACGGTGGGGGTGGTGAAA
Downstream 100 bases:
>100_bases ATCTGGAGGTGCTCTATAATAAACGAACAGAAAATTCTTGCGATGCTTGGCTTTGCGGCAAAAGCAAGAAAAATTGTTTT TGGTAAAGATCAAATCAGAG
Product: Zn-dependent hydrolase of the beta-lactamase fold-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MLIRWHGHACFTIESAGKTLLTDPFDSSVGYAIPDIEPDIVTESHQHFDHNAHHLLKGNFNLIKETGHFFVEGYRINGFL TYHDEFKGKKRGTNIIYEIITPDGFRIVHLGDLGESLSRELEQKLMHPDILMIPVGGIYTIGPKEAHNLANELKPSIVIP MHFKTKNLKFELKELENFTSKFENVEKMKELNLNSRKEVENLHLKVIVLDYE
Sequences:
>Translated_212_residues MLIRWHGHACFTIESAGKTLLTDPFDSSVGYAIPDIEPDIVTESHQHFDHNAHHLLKGNFNLIKETGHFFVEGYRINGFL TYHDEFKGKKRGTNIIYEIITPDGFRIVHLGDLGESLSRELEQKLMHPDILMIPVGGIYTIGPKEAHNLANELKPSIVIP MHFKTKNLKFELKELENFTSKFENVEKMKELNLNSRKEVENLHLKVIVLDYE >Mature_212_residues MLIRWHGHACFTIESAGKTLLTDPFDSSVGYAIPDIEPDIVTESHQHFDHNAHHLLKGNFNLIKETGHFFVEGYRINGFL TYHDEFKGKKRGTNIIYEIITPDGFRIVHLGDLGESLSRELEQKLMHPDILMIPVGGIYTIGPKEAHNLANELKPSIVIP MHFKTKNLKFELKELENFTSKFENVEKMKELNLNSRKEVENLHLKVIVLDYE
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0173 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR022877 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 24418; Mature: 24418
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIRWHGHACFTIESAGKTLLTDPFDSSVGYAIPDIEPDIVTESHQHFDHNAHHLLKGNF CEEEECCCEEEEEECCCCEEEECCCCCCCCEECCCCCCCCCCCCHHHCCCCCCEEEECCC NLIKETGHFFVEGYRINGFLTYHDEFKGKKRGTNIIYEIITPDGFRIVHLGDLGESLSRE EEEEECCCEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHH LEQKLMHPDILMIPVGGIYTIGPKEAHNLANELKPSIVIPMHFKTKNLKFELKELENFTS HHHHHCCCCEEEEECCCEEEECCHHHHHHHHHCCCCEEEEEEEECCCCEEEHHHHHHHHH KFENVEKMKELNLNSRKEVENLHLKVIVLDYE HHHHHHHHHHCCCCCCCCCCEEEEEEEEEECC >Mature Secondary Structure MLIRWHGHACFTIESAGKTLLTDPFDSSVGYAIPDIEPDIVTESHQHFDHNAHHLLKGNF CEEEECCCEEEEEECCCCEEEECCCCCCCCEECCCCCCCCCCCCHHHCCCCCCEEEECCC NLIKETGHFFVEGYRINGFLTYHDEFKGKKRGTNIIYEIITPDGFRIVHLGDLGESLSRE EEEEECCCEEEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHH LEQKLMHPDILMIPVGGIYTIGPKEAHNLANELKPSIVIPMHFKTKNLKFELKELENFTS HHHHHCCCCEEEEECCCEEEECCHHHHHHHHHCCCCEEEEEEEECCCCEEEHHHHHHHHH KFENVEKMKELNLNSRKEVENLHLKVIVLDYE HHHHHHHHHHCCCCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA