| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is malF [H]
Identifier: 239617768
GI number: 239617768
Start: 1482298
End: 1484043
Strand: Reverse
Name: malF [H]
Synonym: Kole_1393
Alternate gene names: 239617768
Gene position: 1484043-1482298 (Counterclockwise)
Preceding gene: 239617769
Following gene: 239617767
Centisome position: 64.46
GC content: 43.3
Gene sequence:
>1746_bases GTGAGCGGAAAAAAACTCGTTGGGTTTGTTCTTATCCTGTTGATCTTAGCTGTTTTTAATTCTTTCGCGGTCTGGAGCAT AATGGTTCTCCTATCGAGTGGAAATTACGGTCTTGGTATCATAATGGCCATTTTAACGGTGGCAATTGATTTTGTTGTCT TAAATCCCAAAGCTTATCCCTATCGATACATGATCCCTGCGATGATACTGTTATTCATTCTAACCATCTATCCAATGTAC TACACGCTGAGAACGGCCTTCACAAATTTCGGAACAGGTCATTTGTTTACCCGTCAACAGGTGGTACAAAAGCTTCTAAC CGAGTATTTTTATACTCCTGAAAATCCAAAAGAATATGATTTTTCCATCTTCGTGAACCTAAAAGACTACCGCCCTACAG ACGACTTTGTGATTCTTTTTACCGATACCGAAACCGGTAAACAATACATTGCCCCTCGACCCGTTTCAATCCAGAAAGAC AGCGAAGGAAATATTCTTCAAGCAAGAGGGAAAATGTTTATTGTCGAAAGGAATCTGGCCTCCATTGACGGTACTTTATA TAGGCTTGTACGCTCTGCCACAGACCAGATCATTTCGATAACAACTGATTCCGGAAAGAAATATCTGTATTTCTACTCTC CTAAAGATGAAACGACCAAACCAAACGCCCCCTTCTATCTAAGGGATATCCGTGGTGTCTGGCTGAAGGGCGCAGAGTTT TCCAACCCTGAAGGTTTACAGGTCAGGCTAAATCCAATGACGCTCTACAGGAACTTCGCAACAACTGAAAGAAAATACGG GCTGAAAACCATCACCATCCTTGAGAATGGAAGAGCTGTGCAGAAAGATGTCGTTTACAACAAACAAACAGGGAAGACAC TCGTAGAAAAGGACGGTTATTTTTACGATATAGATGAAAACGGGCAACAATACATCGTCGATGGATACGTATCTAATGTT GGGTTCTCCAACTTTATAAAGATGATAAAGGATCCAAGGATAAACAAACCCTTCCTTCAAGTATTCACCTGGACATTCAC ATGGGCTGCTTTGAGCGTTCTGTTCACATTTACAATAGGATTGGCACTTGCTTTGGTACTGAACGATCCAGGCATGAAAG GGAAAAAGATATACAGAACACTTCTCATAATTCCGTGGGCGATTCCAGCTTTTATATCCGTTCTTGTGTGGAAAAACGGC ATGTTTAACGAAACCTACGGAATAATAAACCGTTTCATAGTTCAGGGATTGTTTGGCGCTGAAAAACCTATCAAATGGCT TAGTGATCCTCTCTGGGCGAAGGCCGCCGTTCTAATCGTCAACACATGGCTTGGATTCCCTTACATGATGACCGTATCTC TCGGCGCCTTACAGAGCATTCCCGGCGAGCTTTACGAAGCTGCCGCTATCGACGGAGCAAATGGAAGACAACGCTTCTGG AAAATAACCTTTCCATTGTTGATGGTATCTGTTGCCCCCTTGCTCGTTGGAAGTTTTTCCTTTAACTTCAATAACTTCGT TGGTATATACCTATTGACCGGTGGCGGTCCCGCGATTCCAGGAAGCTCTACCCCAGCCGGTGCTACCGACATCCTGATAT CCTATACCTACAAACTCGCTTTCGAAGGTAGGGGCCAGGACTTTGGTTTCGCCAGCGCTATCTCTATCCTGATATTCATC ATAGTAGGTAGTTTCAGCTGGTTGAATTTCAAACTTTCAGGCGCATTCGAAGAGGTGAGCAGATAA
Upstream 100 bases:
>100_bases TGAGGAATAATTATCTTCTGTATTTGCTTATTGACTAGCGGGGTGTTCTATACACCCCGCGTTTGTCTAAAAAGTTGACT TAACTCTGGAGGTAATCGCG
Downstream 100 bases:
>100_bases TGGCCGTAGAAAAGAAAAATTACTGGTTGAGACATATAATTCTGGTGATTATTGTTGCAATCGTGCTGTTCCCCATGGTA TGGCTGATAAGCACCTCCAT
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 581; Mature: 580
Protein sequence:
>581_residues MSGKKLVGFVLILLILAVFNSFAVWSIMVLLSSGNYGLGIIMAILTVAIDFVVLNPKAYPYRYMIPAMILLFILTIYPMY YTLRTAFTNFGTGHLFTRQQVVQKLLTEYFYTPENPKEYDFSIFVNLKDYRPTDDFVILFTDTETGKQYIAPRPVSIQKD SEGNILQARGKMFIVERNLASIDGTLYRLVRSATDQIISITTDSGKKYLYFYSPKDETTKPNAPFYLRDIRGVWLKGAEF SNPEGLQVRLNPMTLYRNFATTERKYGLKTITILENGRAVQKDVVYNKQTGKTLVEKDGYFYDIDENGQQYIVDGYVSNV GFSNFIKMIKDPRINKPFLQVFTWTFTWAALSVLFTFTIGLALALVLNDPGMKGKKIYRTLLIIPWAIPAFISVLVWKNG MFNETYGIINRFIVQGLFGAEKPIKWLSDPLWAKAAVLIVNTWLGFPYMMTVSLGALQSIPGELYEAAAIDGANGRQRFW KITFPLLMVSVAPLLVGSFSFNFNNFVGIYLLTGGGPAIPGSSTPAGATDILISYTYKLAFEGRGQDFGFASAISILIFI IVGSFSWLNFKLSGAFEEVSR
Sequences:
>Translated_581_residues MSGKKLVGFVLILLILAVFNSFAVWSIMVLLSSGNYGLGIIMAILTVAIDFVVLNPKAYPYRYMIPAMILLFILTIYPMY YTLRTAFTNFGTGHLFTRQQVVQKLLTEYFYTPENPKEYDFSIFVNLKDYRPTDDFVILFTDTETGKQYIAPRPVSIQKD SEGNILQARGKMFIVERNLASIDGTLYRLVRSATDQIISITTDSGKKYLYFYSPKDETTKPNAPFYLRDIRGVWLKGAEF SNPEGLQVRLNPMTLYRNFATTERKYGLKTITILENGRAVQKDVVYNKQTGKTLVEKDGYFYDIDENGQQYIVDGYVSNV GFSNFIKMIKDPRINKPFLQVFTWTFTWAALSVLFTFTIGLALALVLNDPGMKGKKIYRTLLIIPWAIPAFISVLVWKNG MFNETYGIINRFIVQGLFGAEKPIKWLSDPLWAKAAVLIVNTWLGFPYMMTVSLGALQSIPGELYEAAAIDGANGRQRFW KITFPLLMVSVAPLLVGSFSFNFNNFVGIYLLTGGGPAIPGSSTPAGATDILISYTYKLAFEGRGQDFGFASAISILIFI IVGSFSWLNFKLSGAFEEVSR >Mature_580_residues SGKKLVGFVLILLILAVFNSFAVWSIMVLLSSGNYGLGIIMAILTVAIDFVVLNPKAYPYRYMIPAMILLFILTIYPMYY TLRTAFTNFGTGHLFTRQQVVQKLLTEYFYTPENPKEYDFSIFVNLKDYRPTDDFVILFTDTETGKQYIAPRPVSIQKDS EGNILQARGKMFIVERNLASIDGTLYRLVRSATDQIISITTDSGKKYLYFYSPKDETTKPNAPFYLRDIRGVWLKGAEFS NPEGLQVRLNPMTLYRNFATTERKYGLKTITILENGRAVQKDVVYNKQTGKTLVEKDGYFYDIDENGQQYIVDGYVSNVG FSNFIKMIKDPRINKPFLQVFTWTFTWAALSVLFTFTIGLALALVLNDPGMKGKKIYRTLLIIPWAIPAFISVLVWKNGM FNETYGIINRFIVQGLFGAEKPIKWLSDPLWAKAAVLIVNTWLGFPYMMTVSLGALQSIPGELYEAAAIDGANGRQRFWK ITFPLLMVSVAPLLVGSFSFNFNNFVGIYLLTGGGPAIPGSSTPAGATDILISYTYKLAFEGRGQDFGFASAISILIFII VGSFSWLNFKLSGAFEEVSR
Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1175
COG function: function code G; ABC-type sugar transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790465, Length=555, Percent_Identity=33.5135135135135, Blast_Score=290, Evalue=1e-79, Organism=Escherichia coli, GI1787570, Length=243, Percent_Identity=34.5679012345679, Blast_Score=108, Evalue=9e-25, Organism=Escherichia coli, GI1789861, Length=246, Percent_Identity=29.6747967479675, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 65459; Mature: 65328
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKKLVGFVLILLILAVFNSFAVWSIMVLLSSGNYGLGIIMAILTVAIDFVVLNPKAYP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEECCCCCC YRYMIPAMILLFILTIYPMYYTLRTAFTNFGTGHLFTRQQVVQKLLTEYFYTPENPKEYD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEE FSIFVNLKDYRPTDDFVILFTDTETGKQYIAPRPVSIQKDSEGNILQARGKMFIVERNLA EEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCEEEECCCEEEEECCCH SIDGTLYRLVRSATDQIISITTDSGKKYLYFYSPKDETTKPNAPFYLRDIRGVWLKGAEF HHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCCEEEECCCC SNPEGLQVRLNPMTLYRNFATTERKYGLKTITILENGRAVQKDVVYNKQTGKTLVEKDGY CCCCCCEEEECHHHEEHHHHHHHHHCCCEEEEEEECCCEEHHHHCCCCCCCCCHHHCCCE FYDIDENGQQYIVDGYVSNVGFSNFIKMIKDPRINKPFLQVFTWTFTWAALSVLFTFTIG EEEECCCCCEEEEEHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LALALVLNDPGMKGKKIYRTLLIIPWAIPAFISVLVWKNGMFNETYGIINRFIVQGLFGA HHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC EKPIKWLSDPLWAKAAVLIVNTWLGFPYMMTVSLGALQSIPGELYEAAAIDGANGRQRFW CCCHHHHCCCHHHHHHHHEEEHHHCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEE KITFPLLMVSVAPLLVGSFSFNFNNFVGIYLLTGGGPAIPGSSTPAGATDILISYTYKLA EEHHHHHHHHHHHHHHCCEECCCCCEEEEEEEECCCCCCCCCCCCCCCHHEEEEEEEEEE FEGRGQDFGFASAISILIFIIVGSFSWLNFKLSGAFEEVSR ECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHHHHCC >Mature Secondary Structure SGKKLVGFVLILLILAVFNSFAVWSIMVLLSSGNYGLGIIMAILTVAIDFVVLNPKAYP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEECCCCCC YRYMIPAMILLFILTIYPMYYTLRTAFTNFGTGHLFTRQQVVQKLLTEYFYTPENPKEYD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEE FSIFVNLKDYRPTDDFVILFTDTETGKQYIAPRPVSIQKDSEGNILQARGKMFIVERNLA EEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCEEEECCCEEEEECCCH SIDGTLYRLVRSATDQIISITTDSGKKYLYFYSPKDETTKPNAPFYLRDIRGVWLKGAEF HHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCCEEEECCCC SNPEGLQVRLNPMTLYRNFATTERKYGLKTITILENGRAVQKDVVYNKQTGKTLVEKDGY CCCCCCEEEECHHHEEHHHHHHHHHCCCEEEEEEECCCEEHHHHCCCCCCCCCHHHCCCE FYDIDENGQQYIVDGYVSNVGFSNFIKMIKDPRINKPFLQVFTWTFTWAALSVLFTFTIG EEEECCCCCEEEEEHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LALALVLNDPGMKGKKIYRTLLIIPWAIPAFISVLVWKNGMFNETYGIINRFIVQGLFGA HHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC EKPIKWLSDPLWAKAAVLIVNTWLGFPYMMTVSLGALQSIPGELYEAAAIDGANGRQRFW CCCHHHHCCCHHHHHHHHEEEHHHCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEE KITFPLLMVSVAPLLVGSFSFNFNNFVGIYLLTGGGPAIPGSSTPAGATDILISYTYKLA EEHHHHHHHHHHHHHHCCEECCCCCEEEEEEEECCCCCCCCCCCCCCCHHEEEEEEEEEE FEGRGQDFGFASAISILIFIIVGSFSWLNFKLSGAFEEVSR ECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]