| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is yxkD [H]
Identifier: 239617762
GI number: 239617762
Start: 1474751
End: 1475611
Strand: Direct
Name: yxkD [H]
Synonym: Kole_1387
Alternate gene names: 239617762
Gene position: 1474751-1475611 (Clockwise)
Preceding gene: 239617761
Following gene: 239617763
Centisome position: 64.06
GC content: 43.09
Gene sequence:
>861_bases ATGAACAGTAGAAAGGTAATTCTCGATTATACACTTGTAACGCTCGGTTCTCTTTTAACGGCGATTGCGCTGGTTTCTTT CATGATACCCAACAATATTATAGCGGGCGGGGTTAGCGGCCTCGCCATAATTTTTTACCGCCTTTTTGGTTGGTGGGTTG GGGTACAGATGTTTGTATACAACGCTGTGTTGTTTGTTCTCGCTTTTGCTTTGCTCGGTATAGGTTTTGGAATAAAATCC ATATACTCGGCAATAATGCTTTCTTTTCTCGTAGACTTTCTGCAACAGCTCAATTTTCCGGTATTTCAGGCTTCTACCGT TCAGGATGGTGGTCTCCTTGTTGCGATATATGGTGGTGTCATTGCGGGTGTTGGAATGGGATTGGTTCTCTGGCGTGGTG CGTCAACTGGTGGTACGGATATAATCGCTATGATCTTGAACAAGTATTTTCATATAAGTACGGGTTCAGGATTGCTTATT GCCGATACGTTGATAACCATATTTGCCATAATTGTGTTTGGCCCTATTGTGGCTATGTACGGAATTATAACGATTTTCAC CACCAGTAAAACCATTGACGGTTTGATAGAAGGTGTTGGGAACACGAGGACGGCTTTCATAATAAGCGAGCGTCATGAAG ATATAAAGAAGAAAATCCTGAGGGACATGGAGCGTGGGGTAACGCTTATCCATGCCGAGGGTGGTTTTACAGGTGTTAAG AGACCGGTTATCATGGTATCCATCAGGCGTCGTGAAATCGGGCAGCTCAGAAGGATTATAAGAGAGATCGATCCGAAGTC CTTTACGATAATAGTGAATAACGCGGAGGTTTTTGGAGAAGGATTTAAGAACATCAATTAA
Upstream 100 bases:
>100_bases GATATAATAGTGACCGTTAAGGTTTCTATTCCCAAACCATCTCGAAAAGAGAAAAAGCTGCTTGAAGAAATAGCAAAACT GAAAGGGCTCGGGTGAAAAG
Downstream 100 bases:
>100_bases AACATTGAGGTGAGGCGATGAAGTATCTTTCCATAGACAGTTCGTCGAGACGATTGTTGTTGCTTGGAGTTAATGAAGAT AAAACCATGGGGGTTACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MNSRKVILDYTLVTLGSLLTAIALVSFMIPNNIIAGGVSGLAIIFYRLFGWWVGVQMFVYNAVLFVLAFALLGIGFGIKS IYSAIMLSFLVDFLQQLNFPVFQASTVQDGGLLVAIYGGVIAGVGMGLVLWRGASTGGTDIIAMILNKYFHISTGSGLLI ADTLITIFAIIVFGPIVAMYGIITIFTTSKTIDGLIEGVGNTRTAFIISERHEDIKKKILRDMERGVTLIHAEGGFTGVK RPVIMVSIRRREIGQLRRIIREIDPKSFTIIVNNAEVFGEGFKNIN
Sequences:
>Translated_286_residues MNSRKVILDYTLVTLGSLLTAIALVSFMIPNNIIAGGVSGLAIIFYRLFGWWVGVQMFVYNAVLFVLAFALLGIGFGIKS IYSAIMLSFLVDFLQQLNFPVFQASTVQDGGLLVAIYGGVIAGVGMGLVLWRGASTGGTDIIAMILNKYFHISTGSGLLI ADTLITIFAIIVFGPIVAMYGIITIFTTSKTIDGLIEGVGNTRTAFIISERHEDIKKKILRDMERGVTLIHAEGGFTGVK RPVIMVSIRRREIGQLRRIIREIDPKSFTIIVNNAEVFGEGFKNIN >Mature_286_residues MNSRKVILDYTLVTLGSLLTAIALVSFMIPNNIIAGGVSGLAIIFYRLFGWWVGVQMFVYNAVLFVLAFALLGIGFGIKS IYSAIMLSFLVDFLQQLNFPVFQASTVQDGGLLVAIYGGVIAGVGMGLVLWRGASTGGTDIIAMILNKYFHISTGSGLLI ADTLITIFAIIVFGPIVAMYGIITIFTTSKTIDGLIEGVGNTRTAFIISERHEDIKKKILRDMERGVTLIHAEGGFTGVK RPVIMVSIRRREIGQLRRIIREIDPKSFTIIVNNAEVFGEGFKNIN
Specific function: Unknown
COG id: COG1284
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0750 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003740 - InterPro: IPR019264 [H]
Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]
EC number: NA
Molecular weight: Translated: 31190; Mature: 31190
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSRKVILDYTLVTLGSLLTAIALVSFMIPNNIIAGGVSGLAIIFYRLFGWWVGVQMFVY CCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH NAVLFVLAFALLGIGFGIKSIYSAIMLSFLVDFLQQLNFPVFQASTVQDGGLLVAIYGGV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEHHHHH IAGVGMGLVLWRGASTGGTDIIAMILNKYFHISTGSGLLIADTLITIFAIIVFGPIVAMY HHHHHHHHHEEECCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH GIITIFTTSKTIDGLIEGVGNTRTAFIISERHEDIKKKILRDMERGVTLIHAEGGFTGVK HHHHHHCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC RPVIMVSIRRREIGQLRRIIREIDPKSFTIIVNNAEVFGEGFKNIN CCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHCCCCCCC >Mature Secondary Structure MNSRKVILDYTLVTLGSLLTAIALVSFMIPNNIIAGGVSGLAIIFYRLFGWWVGVQMFVY CCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH NAVLFVLAFALLGIGFGIKSIYSAIMLSFLVDFLQQLNFPVFQASTVQDGGLLVAIYGGV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEHHHHH IAGVGMGLVLWRGASTGGTDIIAMILNKYFHISTGSGLLIADTLITIFAIIVFGPIVAMY HHHHHHHHHEEECCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH GIITIFTTSKTIDGLIEGVGNTRTAFIISERHEDIKKKILRDMERGVTLIHAEGGFTGVK HHHHHHCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC RPVIMVSIRRREIGQLRRIIREIDPKSFTIIVNNAEVFGEGFKNIN CCEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]