| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is yijE [C]
Identifier: 239617734
GI number: 239617734
Start: 1440899
End: 1441726
Strand: Reverse
Name: yijE [C]
Synonym: Kole_1358
Alternate gene names: 239617734
Gene position: 1441726-1440899 (Counterclockwise)
Preceding gene: 239617742
Following gene: 239617732
Centisome position: 62.63
GC content: 40.58
Gene sequence:
>828_bases GTGTCTATTTTGTCAACCCTATATCTTGCTATAACACTCCTTTTCTTCTCCAGCATGGAAATCGTCTCAAAACCGCTTAT GGGACAAATCGATCCGTTCTTTATGACAGCTTTTCGTTTCTTCATTGGAGGATTATTTTTAATGCCCCTCATTGAAAAAA AACTCCCGCCAAGAGAAATCATTTTACTCACAATGATAGGTTCATTGAACACAATTGTATCTATGACCTTTCTTCAGTTA TCTGTTAAATTTGGAAACGCCTCTACCGCGGCTACATTAATAGCCACTAACCCTTTGTTTGTAACCATTTTTGCTCCCTT TTTTGGCTCTGAAAAACCTTCAAAAAGGAAATTCATCGGGACATTTCTTGGATTTGTAGGAATACTGATTTTTATCAGCG GCATGCTTGAAGGAGACACAATTACTGGTTTTCTCTTCGGAATAGGTTCCGCCATATCTTTCGCACTTTACACCCTATTG CTTAAACCTCATGTGTTAAAACACGGGGCGCTGACAGCAACCGCCTATTCTTCCTTTTTTTCCGGTGTTGTGTATTCAGC GACCCTTATGTTATTCGGCCAGTTCAAAATTACATCCCTAAATCTTTCGAGCTGGCTGATTCTTCTGTATCTTGGAATCG GTGTTACCGGCATCGCATACTTTACATTTTTTGCCGCCGCCAAGCGTATTGGAGCCTCAACAGCAAGCAGAGTGTTTTAC CTCAAACCGGTGGTTGCAACTCTTCTCGCTTTCATATTCCTGTCTGAAGAAATCGGCGCTTTCAAACTCATCGGTATAGT GGTGATAATTCTTTCATTGATGATTTAA
Upstream 100 bases:
>100_bases TTATTTCCTTTTGAGAAAAAATAGTTCACCAGGTAAAAAAACACTCCAATAAAATTCAGGTATAATTTGACTTAAAGAGC AGACTACAAAAGACAGGATG
Downstream 100 bases:
>100_bases AAACCGAGAATCCGAGATCCGGTGTTCGAGATCCGAGAACCGGTAACCAATGCACAACTGAGGCTTGCAACGCTGTCAGC TGATGGAGCGACGCGAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: ORFY [H]
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MSILSTLYLAITLLFFSSMEIVSKPLMGQIDPFFMTAFRFFIGGLFLMPLIEKKLPPREIILLTMIGSLNTIVSMTFLQL SVKFGNASTAATLIATNPLFVTIFAPFFGSEKPSKRKFIGTFLGFVGILIFISGMLEGDTITGFLFGIGSAISFALYTLL LKPHVLKHGALTATAYSSFFSGVVYSATLMLFGQFKITSLNLSSWLILLYLGIGVTGIAYFTFFAAAKRIGASTASRVFY LKPVVATLLAFIFLSEEIGAFKLIGIVVIILSLMI
Sequences:
>Translated_275_residues MSILSTLYLAITLLFFSSMEIVSKPLMGQIDPFFMTAFRFFIGGLFLMPLIEKKLPPREIILLTMIGSLNTIVSMTFLQL SVKFGNASTAATLIATNPLFVTIFAPFFGSEKPSKRKFIGTFLGFVGILIFISGMLEGDTITGFLFGIGSAISFALYTLL LKPHVLKHGALTATAYSSFFSGVVYSATLMLFGQFKITSLNLSSWLILLYLGIGVTGIAYFTFFAAAKRIGASTASRVFY LKPVVATLLAFIFLSEEIGAFKLIGIVVIILSLMI >Mature_274_residues SILSTLYLAITLLFFSSMEIVSKPLMGQIDPFFMTAFRFFIGGLFLMPLIEKKLPPREIILLTMIGSLNTIVSMTFLQLS VKFGNASTAATLIATNPLFVTIFAPFFGSEKPSKRKFIGTFLGFVGILIFISGMLEGDTITGFLFGIGSAISFALYTLLL KPHVLKHGALTATAYSSFFSGVVYSATLMLFGQFKITSLNLSSWLILLYLGIGVTGIAYFTFFAAAKRIGASTASRVFYL KPVVATLLAFIFLSEEIGAFKLIGIVVIILSLMI
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 29962; Mature: 29830
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILSTLYLAITLLFFSSMEIVSKPLMGQIDPFFMTAFRFFIGGLFLMPLIEKKLPPREI CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHE ILLTMIGSLNTIVSMTFLQLSVKFGNASTAATLIATNPLFVTIFAPFFGSEKPSKRKFIG EHHHHHHHHHHHHHHHHHHHEEEECCCCHHEEEEECCCEEEEEEEHHCCCCCCCHHHHHH TFLGFVGILIFISGMLEGDTITGFLFGIGSAISFALYTLLLKPHVLKHGALTATAYSSFF HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH SGVVYSATLMLFGQFKITSLNLSSWLILLYLGIGVTGIAYFTFFAAAKRIGASTASRVFY HHHHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LKPVVATLLAFIFLSEEIGAFKLIGIVVIILSLMI HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC >Mature Secondary Structure SILSTLYLAITLLFFSSMEIVSKPLMGQIDPFFMTAFRFFIGGLFLMPLIEKKLPPREI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHE ILLTMIGSLNTIVSMTFLQLSVKFGNASTAATLIATNPLFVTIFAPFFGSEKPSKRKFIG EHHHHHHHHHHHHHHHHHHHEEEECCCCHHEEEEECCCEEEEEEEHHCCCCCCCHHHHHH TFLGFVGILIFISGMLEGDTITGFLFGIGSAISFALYTLLLKPHVLKHGALTATAYSSFF HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH SGVVYSATLMLFGQFKITSLNLSSWLILLYLGIGVTGIAYFTFFAAAKRIGASTASRVFY HHHHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LKPVVATLLAFIFLSEEIGAFKLIGIVVIILSLMI HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8550525 [H]