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The map label for this gene is perM [C]

Identifier: 239617723

GI number: 239617723

Start: 1427365

End: 1428354

Strand: Reverse

Name: perM [C]

Synonym: Kole_1347

Alternate gene names: 239617723

Gene position: 1428354-1427365 (Counterclockwise)

Preceding gene: 239617724

Following gene: 239617722

Centisome position: 62.04

GC content: 37.58

Gene sequence:

>990_bases
ATGGACAGAAATGCGATATGGATACTTTCCTATGCTGGAATCTATTTTTTGAGTCTTTTTATTTTTCCGAACACATCAAG
GGTTCTAAGCATGGCTTTTTTAATAGCTCTTTTGCTAAATTATCCTTCAAGATTTTTCCAAAAGAAGACTTTGAAAAGGC
TAACCGTTGTAATGGTAAGCCTTGGATTAGTTGTATTGTTTGCGTACCTGTTTTACACCTTCCCTTCAATGATTTCTATG
AGTGTTGATCAGTTTAAGGAAAGTTTCAACAAACTCATCATCGATAACCCGTTGGAATCTATCATGGCAGATTTACCCGA
TTTTATACAGGGATCTATAAACGATTTCTTTGGGAATTTTGGGAGTTTGATGTCGAATGTGTTGGTCAGTATAGTTACCT
ATATAAGCACTCACATAGCAAACTGGATAACCTTTGTCGTGCTTCTTATAGTCGCTGCCATTTACATTCTTTCCAGAGGA
AAGAATGTTGATAGGATTATCCCAAAGCTGTTTCCGAAGTGTAATACCAAGAAAATAATGGAATTCTGGAAGGGATTCTT
AGATGATCTTGAGACATATATTGGTGGACAGTTGATTGTGGCTTTGTGTATCGGCGTGTTTATAGGTATCTCTACAGCGA
TTTTTGGAATTCAAGGTTCTTATTTTCTCGGTCTGCTTGCTGGTATCACCAACCTTATACCTTTTTTGGGAGTCATAATA
ACAGCTATTCCAATGATGGTATTTGGTTATACCAGCAGAGGGTTGCTGGGGGTTGGTATTGCTTTGATCATACTTGTAGC
GGCAAACCAGATGGAAATGTGGTTCCTATCGCCAAAGATCGTCTCGAATCAATTAAAGTTTAACTGGTTCGTTGTTCTCA
TAGCGCTTCTTGCATTCAGCGAACTGTTTGGAGCTTTTGGAATTATACTTACCGTACCCACTATTGTTTTCATAAGAAGA
TTCTGGAATATGTTTGTTTTGAAAGACTAG

Upstream 100 bases:

>100_bases
GTTGATGAAGCGCACTGAAGAAAGCGAAAAAGTCTAACAAGGTCACAGGTAGAAGCATTATCATATAACTCCTGATATAA
ATCAGAAAGGATAGAAGACA

Downstream 100 bases:

>100_bases
AAAACCGAGAACCGGTGACCGAGATCTGGGATTAGAAATTAAAAGCGAGGATAGATGTAGGAGACTGGAGTTTAGATAAA
GATCGGGTATAGTGTCTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MDRNAIWILSYAGIYFLSLFIFPNTSRVLSMAFLIALLLNYPSRFFQKKTLKRLTVVMVSLGLVVLFAYLFYTFPSMISM
SVDQFKESFNKLIIDNPLESIMADLPDFIQGSINDFFGNFGSLMSNVLVSIVTYISTHIANWITFVVLLIVAAIYILSRG
KNVDRIIPKLFPKCNTKKIMEFWKGFLDDLETYIGGQLIVALCIGVFIGISTAIFGIQGSYFLGLLAGITNLIPFLGVII
TAIPMMVFGYTSRGLLGVGIALIILVAANQMEMWFLSPKIVSNQLKFNWFVVLIALLAFSELFGAFGIILTVPTIVFIRR
FWNMFVLKD

Sequences:

>Translated_329_residues
MDRNAIWILSYAGIYFLSLFIFPNTSRVLSMAFLIALLLNYPSRFFQKKTLKRLTVVMVSLGLVVLFAYLFYTFPSMISM
SVDQFKESFNKLIIDNPLESIMADLPDFIQGSINDFFGNFGSLMSNVLVSIVTYISTHIANWITFVVLLIVAAIYILSRG
KNVDRIIPKLFPKCNTKKIMEFWKGFLDDLETYIGGQLIVALCIGVFIGISTAIFGIQGSYFLGLLAGITNLIPFLGVII
TAIPMMVFGYTSRGLLGVGIALIILVAANQMEMWFLSPKIVSNQLKFNWFVVLIALLAFSELFGAFGIILTVPTIVFIRR
FWNMFVLKD
>Mature_329_residues
MDRNAIWILSYAGIYFLSLFIFPNTSRVLSMAFLIALLLNYPSRFFQKKTLKRLTVVMVSLGLVVLFAYLFYTFPSMISM
SVDQFKESFNKLIIDNPLESIMADLPDFIQGSINDFFGNFGSLMSNVLVSIVTYISTHIANWITFVVLLIVAAIYILSRG
KNVDRIIPKLFPKCNTKKIMEFWKGFLDDLETYIGGQLIVALCIGVFIGISTAIFGIQGSYFLGLLAGITNLIPFLGVII
TAIPMMVFGYTSRGLLGVGIALIILVAANQMEMWFLSPKIVSNQLKFNWFVVLIALLAFSELFGAFGIILTVPTIVFIRR
FWNMFVLKD

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 37024; Mature: 37024

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRNAIWILSYAGIYFLSLFIFPNTSRVLSMAFLIALLLNYPSRFFQKKTLKRLTVVMVS
CCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
LGLVVLFAYLFYTFPSMISMSVDQFKESFNKLIIDNPLESIMADLPDFIQGSINDFFGNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHH
GSLMSNVLVSIVTYISTHIANWITFVVLLIVAAIYILSRGKNVDRIIPKLFPKCNTKKIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHH
EFWKGFLDDLETYIGGQLIVALCIGVFIGISTAIFGIQGSYFLGLLAGITNLIPFLGVII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TAIPMMVFGYTSRGLLGVGIALIILVAANQMEMWFLSPKIVSNQLKFNWFVVLIALLAFS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHEECHHHHHHHHHHHHHHHHHHHHHHH
ELFGAFGIILTVPTIVFIRRFWNMFVLKD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDRNAIWILSYAGIYFLSLFIFPNTSRVLSMAFLIALLLNYPSRFFQKKTLKRLTVVMVS
CCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
LGLVVLFAYLFYTFPSMISMSVDQFKESFNKLIIDNPLESIMADLPDFIQGSINDFFGNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHH
GSLMSNVLVSIVTYISTHIANWITFVVLLIVAAIYILSRGKNVDRIIPKLFPKCNTKKIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHH
EFWKGFLDDLETYIGGQLIVALCIGVFIGISTAIFGIQGSYFLGLLAGITNLIPFLGVII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TAIPMMVFGYTSRGLLGVGIALIILVAANQMEMWFLSPKIVSNQLKFNWFVVLIALLAFS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHEECHHHHHHHHHHHHHHHHHHHHHHH
ELFGAFGIILTVPTIVFIRRFWNMFVLKD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]