| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is 239617718
Identifier: 239617718
GI number: 239617718
Start: 1422060
End: 1423223
Strand: Direct
Name: 239617718
Synonym: Kole_1342
Alternate gene names: NA
Gene position: 1422060-1423223 (Clockwise)
Preceding gene: 239617717
Following gene: 239617719
Centisome position: 61.77
GC content: 40.81
Gene sequence:
>1164_bases ATGGAGAGAAGATTCTATACTCTGTTCAAAGGGCTTTTCCTCGATGAAATTCGCGAATTTCAGAGAGTTTTCTGGATGAT GATTTTCCCTCTAATCCTTTATTTTATACTGGTTTCCGCCCTTGGGAACATGGGGAATGAGGGAGTGAGTTTTAAACTCG GGATTGTGAAAGAAGAGAATCTGTCCGGTTTTGGAAAGATAATCGATGAGGTTTTGAAAGGTATAACCTCCGAAGGAGGT CCTTTCATCGCCATTGAATTTGTGGACAGAGGGTCAGGATTAGAAGCGCTCAGGAAGAATAAAATAGACGCTTTGCTTGT TGTTCCCAAGGGTATTAATGCCGGGTTGGCGAGGGCTTTCATCGTTCGTGGTAAGGTGGAGCCTCCGAATTTGGAAGTTT ATTACGCTGAGGGGAGACAGGCATCTGAAATTTCCGCCGATGTTTTATCGCAAATACTAGAGCAGGTTAACCTTGAAATT GCCAGACAGCAAAAAAAAGATTATAGAACGTTTGAAGTGAAAGAGAATATTGTTTCCTCTCCTGATAAAAAGACTTTCGA TTATGCGGAGTATCTCTTCCCGGGAATTGTGTTGATGATGATCCTTTCTGTTTCTTTGTTCAGCGCTCCTATCAGATTGA TGGTTTTTAGAAATTCCGGAGTGCACAAGAAGCTATACACTACTCCTATAAAGCCGCTGGAGTATTTCGCTGCTTATTTG CTAAAGTTGTTTGTTGTGATAATACTCTCTTTTATCTCTATTTTGTTTGTGGCGCTTTTTGTTTACAGAGTGGAGATTCC TGTTTTTAGTTGTGCGTTTCTCTTTTCGTTCCTGTATTCTATTTTGGTTTTGCTATCGATGGGTTTGATGTTCGCTTCAT TTATTAAAAAGCTTTCAACGGCCAATGTTGTTGGGCAGATAGCTAATCAATTAATGATGTTCCTTGGTGGGCTTTATTTT CCTGTGTTTAATATCCCCTGGACAATGAGATGGCTGGTTTACGCGATCCCAACAACATATCTGGCTGAGTTAACAAGAAG GAGCCTTGGATATCGGATCGCTCCCATACCTGATCACTTTTTGATAATTGTGCCGGCGATATGGCTTGTAACCTCTGTGG TGATTTTCTCTTTGAATTTCAAGAAGGTGATGGGATATGAGTAA
Upstream 100 bases:
>100_bases CAAAGAACACTGGAATTATTATTGACGATGTTATTATAAGAAGACCAAATCTTGAGGATGTTTTCCTGAAACTTACAGGT CGTTCTTTGAGGGATTGAGT
Downstream 100 bases:
>100_bases TATGAAGCAGCTTCGTTCGCTTTTTGTCGCATTTACAAAGGAATCTTTGAGAAATCGTATGGAGGTTTTTTTCAATATTC TTTTTCCTCTTATTCTTCTT
Product: ABC-2 type transporter
Products: NA
Alternate protein names: ABC-2 Type Transporter Family; ABC Transporter; ABC Transporter Permease Protein
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MERRFYTLFKGLFLDEIREFQRVFWMMIFPLILYFILVSALGNMGNEGVSFKLGIVKEENLSGFGKIIDEVLKGITSEGG PFIAIEFVDRGSGLEALRKNKIDALLVVPKGINAGLARAFIVRGKVEPPNLEVYYAEGRQASEISADVLSQILEQVNLEI ARQQKKDYRTFEVKENIVSSPDKKTFDYAEYLFPGIVLMMILSVSLFSAPIRLMVFRNSGVHKKLYTTPIKPLEYFAAYL LKLFVVIILSFISILFVALFVYRVEIPVFSCAFLFSFLYSILVLLSMGLMFASFIKKLSTANVVGQIANQLMMFLGGLYF PVFNIPWTMRWLVYAIPTTYLAELTRRSLGYRIAPIPDHFLIIVPAIWLVTSVVIFSLNFKKVMGYE
Sequences:
>Translated_387_residues MERRFYTLFKGLFLDEIREFQRVFWMMIFPLILYFILVSALGNMGNEGVSFKLGIVKEENLSGFGKIIDEVLKGITSEGG PFIAIEFVDRGSGLEALRKNKIDALLVVPKGINAGLARAFIVRGKVEPPNLEVYYAEGRQASEISADVLSQILEQVNLEI ARQQKKDYRTFEVKENIVSSPDKKTFDYAEYLFPGIVLMMILSVSLFSAPIRLMVFRNSGVHKKLYTTPIKPLEYFAAYL LKLFVVIILSFISILFVALFVYRVEIPVFSCAFLFSFLYSILVLLSMGLMFASFIKKLSTANVVGQIANQLMMFLGGLYF PVFNIPWTMRWLVYAIPTTYLAELTRRSLGYRIAPIPDHFLIIVPAIWLVTSVVIFSLNFKKVMGYE >Mature_387_residues MERRFYTLFKGLFLDEIREFQRVFWMMIFPLILYFILVSALGNMGNEGVSFKLGIVKEENLSGFGKIIDEVLKGITSEGG PFIAIEFVDRGSGLEALRKNKIDALLVVPKGINAGLARAFIVRGKVEPPNLEVYYAEGRQASEISADVLSQILEQVNLEI ARQQKKDYRTFEVKENIVSSPDKKTFDYAEYLFPGIVLMMILSVSLFSAPIRLMVFRNSGVHKKLYTTPIKPLEYFAAYL LKLFVVIILSFISILFVALFVYRVEIPVFSCAFLFSFLYSILVLLSMGLMFASFIKKLSTANVVGQIANQLMMFLGGLYF PVFNIPWTMRWLVYAIPTTYLAELTRRSLGYRIAPIPDHFLIIVPAIWLVTSVVIFSLNFKKVMGYE
Specific function: Unknown
COG id: COG0842
COG function: function code V; ABC-type multidrug transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44087; Mature: 44087
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS51012 ABC_TM2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERRFYTLFKGLFLDEIREFQRVFWMMIFPLILYFILVSALGNMGNEGVSFKLGIVKEEN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCC LSGFGKIIDEVLKGITSEGGPFIAIEFVDRGSGLEALRKNKIDALLVVPKGINAGLARAF CCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHCCCCEEEEECCCCCHHHHHHH IVRGKVEPPNLEVYYAEGRQASEISADVLSQILEQVNLEIARQQKKDYRTFEVKENIVSS HHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC PDKKTFDYAEYLFPGIVLMMILSVSLFSAPIRLMVFRNSGVHKKLYTTPIKPLEYFAAYL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHCCCCCHHHHHHHHH LKLFVVIILSFISILFVALFVYRVEIPVFSCAFLFSFLYSILVLLSMGLMFASFIKKLST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANVVGQIANQLMMFLGGLYFPVFNIPWTMRWLVYAIPTTYLAELTRRSLGYRIAPIPDHF HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHH LIIVPAIWLVTSVVIFSLNFKKVMGYE HHHHHHHHHHHHHHHHHCCHHHHCCCC >Mature Secondary Structure MERRFYTLFKGLFLDEIREFQRVFWMMIFPLILYFILVSALGNMGNEGVSFKLGIVKEEN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCC LSGFGKIIDEVLKGITSEGGPFIAIEFVDRGSGLEALRKNKIDALLVVPKGINAGLARAF CCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHCCCCEEEEECCCCCHHHHHHH IVRGKVEPPNLEVYYAEGRQASEISADVLSQILEQVNLEIARQQKKDYRTFEVKENIVSS HHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC PDKKTFDYAEYLFPGIVLMMILSVSLFSAPIRLMVFRNSGVHKKLYTTPIKPLEYFAAYL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHCCCCCHHHHHHHHH LKLFVVIILSFISILFVALFVYRVEIPVFSCAFLFSFLYSILVLLSMGLMFASFIKKLST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANVVGQIANQLMMFLGGLYFPVFNIPWTMRWLVYAIPTTYLAELTRRSLGYRIAPIPDHF HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHH LIIVPAIWLVTSVVIFSLNFKKVMGYE HHHHHHHHHHHHHHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA