| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617701
Identifier: 239617701
GI number: 239617701
Start: 1404544
End: 1404999
Strand: Direct
Name: 239617701
Synonym: Kole_1325
Alternate gene names: NA
Gene position: 1404544-1404999 (Clockwise)
Preceding gene: 239617700
Following gene: 239617703
Centisome position: 61.01
GC content: 35.09
Gene sequence:
>456_bases TTGGAGAATGTGTTTGAAAAAGTAACAAGAATAGGTATTGATACTTCCCCTTTTATTTATTTCATAGAAGAGAATGAAAA ATACCTCGAGTTTCTTACCTCCCTTTTCAAAAAGATTGACATAGGATCTATAAAGGCTTTTTCGTCAGTCTTAACTCTCG CTGAAGTGCTGGTGAGACCATTTGTTAAAGGAGAACAGTATCTTATCAATGAGTATATTAGTATTCTTACAGGCTGTGAA AACCTTTCTTTGATCCCTGTGGAAAAAGAAATAGCAGTTTTGGCCGCCAAAATTAGAGCTAAGAATGGTTTGAAACTTCC TGATGCTCTCCATTTTGCGACAGCCAAAGTATATAAGTGCGAGTTGTTTATCACAAATGACAAACATTTCAATGGGATCT CAGATTCAGAGATACAGATAGTTTTGCTTGATGATCTTCTTGATAAAAATGCTTGA
Upstream 100 bases:
>100_bases TCAATTACGTGGGCTTGGAAAGCATGTATGGAAAGGTATCAATGCAGATGAGTATGTTCGAGAGCTAAGGGAAGAATGGA AAGAAAGTGAATGAGTCAGT
Downstream 100 bases:
>100_bases AATGCTGGACTTCGTCCAGGAGATTTGCGAAACTGTGCGCTGATGGAGCGACGTTCGAAGACAGAGACTTGCAGACGCTG AATAAAAGCCGAGAATCCGA
Product: PilT protein domain protein
Products: NA
Alternate protein names: PilT Protein-Like Protein; PilT Domain-Containing Protein; PilT Protein-Like; PilT Protein Domain-Containing Protein; PilT Protein
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MENVFEKVTRIGIDTSPFIYFIEENEKYLEFLTSLFKKIDIGSIKAFSSVLTLAEVLVRPFVKGEQYLINEYISILTGCE NLSLIPVEKEIAVLAAKIRAKNGLKLPDALHFATAKVYKCELFITNDKHFNGISDSEIQIVLLDDLLDKNA
Sequences:
>Translated_151_residues MENVFEKVTRIGIDTSPFIYFIEENEKYLEFLTSLFKKIDIGSIKAFSSVLTLAEVLVRPFVKGEQYLINEYISILTGCE NLSLIPVEKEIAVLAAKIRAKNGLKLPDALHFATAKVYKCELFITNDKHFNGISDSEIQIVLLDDLLDKNA >Mature_151_residues MENVFEKVTRIGIDTSPFIYFIEENEKYLEFLTSLFKKIDIGSIKAFSSVLTLAEVLVRPFVKGEQYLINEYISILTGCE NLSLIPVEKEIAVLAAKIRAKNGLKLPDALHFATAKVYKCELFITNDKHFNGISDSEIQIVLLDDLLDKNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17076; Mature: 17076
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENVFEKVTRIGIDTSPFIYFIEENEKYLEFLTSLFKKIDIGSIKAFSSVLTLAEVLVRP CCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH FVKGEQYLINEYISILTGCENLSLIPVEKEIAVLAAKIRAKNGLKLPDALHFATAKVYKC HHCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEE ELFITNDKHFNGISDSEIQIVLLDDLLDKNA EEEEECCCCCCCCCCCCEEEEEEHHHCCCCC >Mature Secondary Structure MENVFEKVTRIGIDTSPFIYFIEENEKYLEFLTSLFKKIDIGSIKAFSSVLTLAEVLVRP CCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH FVKGEQYLINEYISILTGCENLSLIPVEKEIAVLAAKIRAKNGLKLPDALHFATAKVYKC HHCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEE ELFITNDKHFNGISDSEIQIVLLDDLLDKNA EEEEECCCCCCCCCCCCEEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA