| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is 239617689
Identifier: 239617689
GI number: 239617689
Start: 1395687
End: 1396073
Strand: Direct
Name: 239617689
Synonym: Kole_1313
Alternate gene names: NA
Gene position: 1395687-1396073 (Clockwise)
Preceding gene: 239617688
Following gene: 239617692
Centisome position: 60.63
GC content: 40.05
Gene sequence:
>387_bases TTGAAGGTCGTTATTGACACAAATGTACTCGTTTCTGCCTTACTTAAGCCTTACAGTAAGCCTGCCACGATCTTGAATAT GATAATTGCCGGTCAAATTGTTCCTTGCTTTGATGCCAGGATATTTAACGAATATGAACATGTGCTTTTGAGAAAAAAGT TTGGTTTTGATCCATCGCTCGTAGAAATATTTCTTCGATATTTGAAACGGCATGGAATTTTCGTTACACCTAAACCCCTA GATCCAGTGCTTCCTGATCCTTACGATCTTCCTTTCTATGAAGTTGCGGCCTCCGCTGGTGCCGTAATCATTACCGGAAA TAAAAAACATTTTCCTGTTGATGATGTTGAAGTTTTTTCGCCTGACGAATTTTTGCGCCGGGAGTAA
Upstream 100 bases:
>100_bases TTGCTGTGGAGAAAATGAGACTCGGTTCCCTGGCATCGGGAAGGTCAAAGTTGAGCGATAAAGAGATTGAAGAAGAAATA AGAAAGGCAAGGCGAGAGCT
Downstream 100 bases:
>100_bases GCACTCCTTCGGAGTGGGGGAATAATAGACGCTTGCGAGGCTGTCAGCTGGTGGAGCGACGCTCACGAGGTTGAGGCTTG CGGACGCTGATAAAAAGCTG
Product: PilT protein domain protein
Products: NA
Alternate protein names: PilT Domain-Containing Protein
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MKVVIDTNVLVSALLKPYSKPATILNMIIAGQIVPCFDARIFNEYEHVLLRKKFGFDPSLVEIFLRYLKRHGIFVTPKPL DPVLPDPYDLPFYEVAASAGAVIITGNKKHFPVDDVEVFSPDEFLRRE
Sequences:
>Translated_128_residues MKVVIDTNVLVSALLKPYSKPATILNMIIAGQIVPCFDARIFNEYEHVLLRKKFGFDPSLVEIFLRYLKRHGIFVTPKPL DPVLPDPYDLPFYEVAASAGAVIITGNKKHFPVDDVEVFSPDEFLRRE >Mature_128_residues MKVVIDTNVLVSALLKPYSKPATILNMIIAGQIVPCFDARIFNEYEHVLLRKKFGFDPSLVEIFLRYLKRHGIFVTPKPL DPVLPDPYDLPFYEVAASAGAVIITGNKKHFPVDDVEVFSPDEFLRRE
Specific function: Unknown
COG id: COG1569
COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14547; Mature: 14547
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVVIDTNVLVSALLKPYSKPATILNMIIAGQIVPCFDARIFNEYEHVLLRKKFGFDPSL CEEEECHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH VEIFLRYLKRHGIFVTPKPLDPVLPDPYDLPFYEVAASAGAVIITGNKKHFPVDDVEVFS HHHHHHHHHHCCEEECCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCEEEC PDEFLRRE CHHHHHCC >Mature Secondary Structure MKVVIDTNVLVSALLKPYSKPATILNMIIAGQIVPCFDARIFNEYEHVLLRKKFGFDPSL CEEEECHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH VEIFLRYLKRHGIFVTPKPLDPVLPDPYDLPFYEVAASAGAVIITGNKKHFPVDDVEVFS HHHHHHHHHHCCEEECCCCCCCCCCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCEEEC PDEFLRRE CHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA