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The map label for this gene is istA [H]

Identifier: 239617669

GI number: 239617669

Start: 1378095

End: 1379570

Strand: Direct

Name: istA [H]

Synonym: Kole_1293

Alternate gene names: 239617669

Gene position: 1378095-1379570 (Clockwise)

Preceding gene: 239617668

Following gene: 239617670

Centisome position: 59.86

GC content: 43.16

Gene sequence:

>1476_bases
ATGATCCAGGTACATCATATCAAATATCTGCGAGAATTTAAAGGGAAGTCATTGAGAAGCATAGCCAACGAGACGGGTCA
TGACTTCAGAACGGTGAAGAAATATGACGAAATGGACGATTTCAACGAGTATGTTCAACGCAGAAAGAAGACTTCCAAGC
TCGAACCGTACAAGCCCAAAATAGATGAATGGCTGGAAGAAGACAAAAGAGTCAAAGCGAAACAGCGACACACTGCCAGA
AGGATTTACAGGAGATTGTGTGAGGAATATCCAGATTTCCCCCTCAGTGAACGTACCGTGAGGGCATATGTGAGGAGGAA
AAAGAAGGAATTATATTCCAACGAAGGTTATATACCTCTTGACCATCCTGGTGGTGAGGCACAAGCGGATTTCGGTCATG
CTCAGTTCATTGAAAAGGGTAAAGAAACGACGTTGCATTATCTAAACCTTTCCTTTCCATACAGCAACGGAGGATATTTT
CAATTATTTAGAGGGGAGAACCTTGAATGTTTGCTCGAGGGGTTAAAGAACATATTCGAACATATGGGAAAGGTTCCCAG
GCGTATATGGTTCGACAACCTATCTCCCGTGGTGAAAAAAATCCTGGATGGAGGGGAAAGGGAAGTAACGGAGAAGTTTT
ACAGATTTTGCCTTCATTATGGATTTGAGGCGGTGTTTTGTAATCCTGGTCGGGGCAATGAAAAAGGCAATGTGGAGAAC
AAGGTTGGATATAACAGGCGAAACTTCTTTGTTCCCATACCCAGGATAGAAAACCTTGAGGACTACAACAAAAAACTCTT
AACCCTCTCGGAGAAAGATATGGAAAGACCCCATTACCGAAAGGGGAAGAGCATTAAAGAACTATTTTTAGAAGAAAAGA
AAAAGATGCTGCCACTAAACGAAAAGCCTTTGGATATTTCCAGGTTACAGAAGGTGAAGACAGACAAGTATGGGATGCTT
CGTTTTGAAAACAACAGATACTCTGTATCTCCAAAATGTGCGGAAATAGAAGTGTGGTTGAAGATAGGGGCGTCGGAGAT
AGAGATACTGGATGAAGACTACAAAGTACTCGTAAAACACCCAAGATTGTACGGACACAACCTCCAATCTCTGAATTGGT
ATCCATACCTTGAGACCTTGAGCAAAAGGCCAGGTGCGTTAAAATACACAGGATTTTACAGGGAATTGCCTCCTATTTGG
CAAGAATACTTCGAATCCTGTGATTACCAGGAAAAGAAAACCAGCCTGAAGTTGTTGGTCAAAATGCTGCGCGAAACAGA
TATGGAAACCGCGAGACATGCACTGGAGATAAGCCGCAAGAGCGAACGCTGCAATGCTGAGACCATATTCCTATCGTACC
GACGGTTGATCCAGGAAGAACCATCGCCCTTTGAAACAGGGAAGGAAGTACCGAGATTACAGACATACACAACCGATTTC
AAGGAATACGATTCCCTGGTGGGTGAAAGGAAATGA

Upstream 100 bases:

>100_bases
CGGTAGGGAAAAAGAAAAGATCATTGCCAGCACCGGGGAAATCCATTACCCTTTAATTGCACAGCAAACAGTTAAAGGGG
GTTAGAAAGGAGTGCTGACA

Downstream 100 bases:

>100_bases
AAGAAATCATCGCTCAATACTGCAAAGAACTGAGATTGGGGAAAAGCATAGTGGAAAACTACCAAAGGATACAGGCAGAA
ACCAACGAAGAATTCCTTCT

Product: transposase (25)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MIQVHHIKYLREFKGKSLRSIANETGHDFRTVKKYDEMDDFNEYVQRRKKTSKLEPYKPKIDEWLEEDKRVKAKQRHTAR
RIYRRLCEEYPDFPLSERTVRAYVRRKKKELYSNEGYIPLDHPGGEAQADFGHAQFIEKGKETTLHYLNLSFPYSNGGYF
QLFRGENLECLLEGLKNIFEHMGKVPRRIWFDNLSPVVKKILDGGEREVTEKFYRFCLHYGFEAVFCNPGRGNEKGNVEN
KVGYNRRNFFVPIPRIENLEDYNKKLLTLSEKDMERPHYRKGKSIKELFLEEKKKMLPLNEKPLDISRLQKVKTDKYGML
RFENNRYSVSPKCAEIEVWLKIGASEIEILDEDYKVLVKHPRLYGHNLQSLNWYPYLETLSKRPGALKYTGFYRELPPIW
QEYFESCDYQEKKTSLKLLVKMLRETDMETARHALEISRKSERCNAETIFLSYRRLIQEEPSPFETGKEVPRLQTYTTDF
KEYDSLVGERK

Sequences:

>Translated_491_residues
MIQVHHIKYLREFKGKSLRSIANETGHDFRTVKKYDEMDDFNEYVQRRKKTSKLEPYKPKIDEWLEEDKRVKAKQRHTAR
RIYRRLCEEYPDFPLSERTVRAYVRRKKKELYSNEGYIPLDHPGGEAQADFGHAQFIEKGKETTLHYLNLSFPYSNGGYF
QLFRGENLECLLEGLKNIFEHMGKVPRRIWFDNLSPVVKKILDGGEREVTEKFYRFCLHYGFEAVFCNPGRGNEKGNVEN
KVGYNRRNFFVPIPRIENLEDYNKKLLTLSEKDMERPHYRKGKSIKELFLEEKKKMLPLNEKPLDISRLQKVKTDKYGML
RFENNRYSVSPKCAEIEVWLKIGASEIEILDEDYKVLVKHPRLYGHNLQSLNWYPYLETLSKRPGALKYTGFYRELPPIW
QEYFESCDYQEKKTSLKLLVKMLRETDMETARHALEISRKSERCNAETIFLSYRRLIQEEPSPFETGKEVPRLQTYTTDF
KEYDSLVGERK
>Mature_491_residues
MIQVHHIKYLREFKGKSLRSIANETGHDFRTVKKYDEMDDFNEYVQRRKKTSKLEPYKPKIDEWLEEDKRVKAKQRHTAR
RIYRRLCEEYPDFPLSERTVRAYVRRKKKELYSNEGYIPLDHPGGEAQADFGHAQFIEKGKETTLHYLNLSFPYSNGGYF
QLFRGENLECLLEGLKNIFEHMGKVPRRIWFDNLSPVVKKILDGGEREVTEKFYRFCLHYGFEAVFCNPGRGNEKGNVEN
KVGYNRRNFFVPIPRIENLEDYNKKLLTLSEKDMERPHYRKGKSIKELFLEEKKKMLPLNEKPLDISRLQKVKTDKYGML
RFENNRYSVSPKCAEIEVWLKIGASEIEILDEDYKVLVKHPRLYGHNLQSLNWYPYLETLSKRPGALKYTGFYRELPPIW
QEYFESCDYQEKKTSLKLLVKMLRETDMETARHALEISRKSERCNAETIFLSYRRLIQEEPSPFETGKEVPRLQTYTTDF
KEYDSLVGERK

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017894
- InterPro:   IPR001584
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 58646; Mature: 58646

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQVHHIKYLREFKGKSLRSIANETGHDFRTVKKYDEMDDFNEYVQRRKKTSKLEPYKPK
CEEEHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
IDEWLEEDKRVKAKQRHTARRIYRRLCEEYPDFPLSERTVRAYVRRKKKELYSNEGYIPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEC
DHPGGEAQADFGHAQFIEKGKETTLHYLNLSFPYSNGGYFQLFRGENLECLLEGLKNIFE
CCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECEECCCCEEEEECCCCHHHHHHHHHHHHH
HMGKVPRRIWFDNLSPVVKKILDGGEREVTEKFYRFCLHYGFEAVFCNPGRGNEKGNVEN
HHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCH
KVGYNRRNFFVPIPRIENLEDYNKKLLTLSEKDMERPHYRKGKSIKELFLEEKKKMLPLN
HCCCCCCCEEEECCCCCCCHHHHHHHEEECHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC
EKPLDISRLQKVKTDKYGMLRFENNRYSVSPKCAEIEVWLKIGASEIEILDEDYKVLVKH
CCCCCHHHHHHHCCCCCCEEEEECCEEECCCCCCEEEEEEEECCHHHHHHCHHHHHHHHC
PRLYGHNLQSLNWYPYLETLSKRPGALKYTGFYRELPPIWQEYFESCDYQEKKTSLKLLV
CHHHCCCCCCCCCCHHHHHHHCCCCCEEECCHHHHCCHHHHHHHHCCCCHHHHHHHHHHH
KMLRETDMETARHALEISRKSERCNAETIFLSYRRLIQEEPSPFETGKEVPRLQTYTTDF
HHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCH
KEYDSLVGERK
HHHHHHHCCCC
>Mature Secondary Structure
MIQVHHIKYLREFKGKSLRSIANETGHDFRTVKKYDEMDDFNEYVQRRKKTSKLEPYKPK
CEEEHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
IDEWLEEDKRVKAKQRHTARRIYRRLCEEYPDFPLSERTVRAYVRRKKKELYSNEGYIPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEC
DHPGGEAQADFGHAQFIEKGKETTLHYLNLSFPYSNGGYFQLFRGENLECLLEGLKNIFE
CCCCCCCCCCCHHHHHHHCCCCCEEEEEEEECEECCCCEEEEECCCCHHHHHHHHHHHHH
HMGKVPRRIWFDNLSPVVKKILDGGEREVTEKFYRFCLHYGFEAVFCNPGRGNEKGNVEN
HHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCH
KVGYNRRNFFVPIPRIENLEDYNKKLLTLSEKDMERPHYRKGKSIKELFLEEKKKMLPLN
HCCCCCCCEEEECCCCCCCHHHHHHHEEECHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC
EKPLDISRLQKVKTDKYGMLRFENNRYSVSPKCAEIEVWLKIGASEIEILDEDYKVLVKH
CCCCCHHHHHHHCCCCCCEEEEECCEEECCCCCCEEEEEEEECCHHHHHHCHHHHHHHHC
PRLYGHNLQSLNWYPYLETLSKRPGALKYTGFYRELPPIWQEYFESCDYQEKKTSLKLLV
CHHHCCCCCCCCCCHHHHHHHCCCCCEEECCHHHHCCHHHHHHHHCCCCHHHHHHHHHHH
KMLRETDMETARHALEISRKSERCNAETIFLSYRRLIQEEPSPFETGKEVPRLQTYTTDF
HHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCH
KEYDSLVGERK
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8755869 [H]