| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617647
Identifier: 239617647
GI number: 239617647
Start: 1345012
End: 1347732
Strand: Reverse
Name: 239617647
Synonym: Kole_1269
Alternate gene names: NA
Gene position: 1347732-1345012 (Counterclockwise)
Preceding gene: 239617648
Following gene: 239617646
Centisome position: 58.54
GC content: 38.92
Gene sequence:
>2721_bases ATGAGCATTCTTAAAATAGTGGAAGAAAACAGAGTTCCCATCTTACTCGCTGAGATAGGGGCGTATTTACACGATCTGGG AAAAGCAACAAAGGATTTTATAGAGGGTAACTCAAAAGAAGCAGGAAACCAACGTCCCTCTCATACCCCTCCTAAGCTTT TTCCTGACGAACTCAGAAAAATCCTATCTGAAGTCAAGATAGACGTGCTAAACGAAAAAGCATCAATTATGGATTTCATA GAACACCATCATAATAGAGAATTGGAAACCGTTCCTAAGCTCGTTGCGTTGATAAGTGCCGTTAATAATGGATTCGACGG GATAGATTCCGGAGTAGATAAAGGAAAAGTGGAAAGCAAGCAGAGCAAAGAGCATACTTTCATCTCCAGTGCGTTTGGAT TTGAAAACTATAAGATCGAGATTGATGAAATAGACCGCATCAAAGAGGAAATGTATAGGAAAATTGAAGAACATCTAACA AGATTTCAAAAAAGCTCTAATGACATTGAAACGCTGTATAAGGTAATTTTCTGTACAAAAAAGTATTATCTTCTATTTCT TGGTGAGACCAGGCGACCTGCGAACGATGTAACATTATGGGATCACTCGTATTCCGTTGCAACAATGATGAAGTGTGCGG TGGCTCAAGAATTTCTGAAGCCTGAAAATACATTCGACCCTCTTCATTTTGACTGGAAAGTTTTTGCTGTGAATTTCGAT GTTCTTGGACTTCTAACTAAGGGGATAAAAATAGGTGACATAAAGGGATACTGGAAGAGTGTCGAAAAGATTTTCGAGGA AGTCAAGAAAATGATAGAGGTCACATATCCAATAGGTAATGAGATCTTTCGTGATACAAAGGGTATTTATTTCCTGACCG CTGCTGTGGAGTTACACGAATTGAAAGAAGAGATCCTGAAAAAGATAAGAGGAATCGAACCGGAAATAATGGCTTGTATT ACGGAAATACCTCTTGAAACGAAAATTCCTCCCGAGGAACAAGGCGATAGGAAAACAATTGAAGCGAAGAAGAAAGAACT CCTGTTGAAATCCATCCCGGAAGCCAGAAAAAAAGCTTTAGAGCGAGTTTCTTTTCCTGCTTACTCGGAGGGATTTCCAT GCAATGAGTTTGGACCTGAGAATAACAAAGAAGTATGTCCGATTTGTAGGTTGAGAACAGTAGAAAGAGGTAAAGAAATA TGCAATCACTGTTTAAACAGAAGGACCAATCGTTCACAGGAATGGCAAATGGACCCGAAAAGTTCCATCTGGATCGACGA AATCTCTGATCACAATGACAGAGTAGCTCTCGTAGTAGGGATGTTCAAAATAGATGAGTGGTTGAACGGAAGTTTTATAC AAACGCTTACGTTTAACGAACCCTCTACCGAAAATGCTAGTAACCCCAGAAACAATGATGTTAGAAAGCATCCGTCCCCT GCTCGCATAAGGAGAGTATGGGAGACTACGGAAGAATTCATCAGGGAAACTGTTTTTAAAGGGATACTAAACAACTATGA ATATCCAGCTTTGAGAAAACAGCGCATAGAACTAGAAATAAACCCAAATCCCAAGGTTCCTGAGGGTTCAACTTGTGACA TATCTATAAGTGGCGTTAGATTCAGCCCAGTTTGTGTCGACAGTGTAAGGGGGCTTTTTGTTACTACGATAAATCTTGAA ATCTTGAGCAAATTCGGAAAAACGGTGAAAGAAATAGCAGAAGCACTTTCCGGCCAGAATATAAAACTGAAAACAGAACC AGAGAAAAGCTGGAGGGATTTCAGGATTGCAAAGGCGAAACCAGCAGACGACAAGTATCAGGATTATCTTCCTTACATAA AAATCTATGACTTTCCAGATCAATTCATGATACTCGTTCCTGCATATGAGACTCTCGACATTGCAGAGAAGATCGTTGAA GAATACGAAAGACAATTTTCCAAAGTACGAGATAGATTGCCCTTGCATCTTGGAGTCATTGCCTTTCATAGAAGAACACC GCTTTACGTGGTGATGGATGCTGCAAAAAGACTGCTGAAGAAGTTTGAATCATCAAAAACCATAGTGGTTGATGTGGAGA GAGTTGAAGATATGAAAGATCCGATATCAGGAATGAGTAAGAAGCTATTGCTGAGGGTCAACAAAAGAAGGATTCCCTTG AAGTGGGTTGTTTCATACTCCACAAAAGATCCAGACGTAGAAGATCTGTGGTATCCATACTTGAGGCTTTGCAACAAAGG GAAACCAAATAGAAAGCTTTGCTTAGATTATACGGGCAATGGGAATTACGTTGTGCACATCAAAGAGATAAAAGAAGGAG ACGAATTAGAAATAGAACCTTCCTATTTCAAACTCTGCTACATAGAGGAAGCTTCAGATAGATTCTATGTGGATGAGAAT TTGAAATTTCTAGACGATATCCATGAAATTCAGAATTTGTGGAAAATAGTTGAACGTAAACTAAGATCGAAAAAATGGAC TATTTCACAGCTCTACGCTTTTTTGGAAGAACTTGAGAAAATCAAAGAATACAATGGAGAAACCTTTGAACAGTTTTTAA GATCGAGTCTTATCAATATACTGGATCTTGATGATTCTTCGAACGAATACAACCTTTTAAAAACGTCAGTTGAAGACAGT TTATTTGAACTGTGTCTCTACTGGAATCTTCAAGTCAGAAAAGAGAAAATAGGAAAGGGGGATCAAAATGAGTCCTTGTG A
Upstream 100 bases:
>100_bases GGGACAAAGGTGCCAGCAGGCTTGAGGTAAAAGAGTTTTTGTCTGCTTTGCAGTTTTCAAATTTTGATGAGCTAAAAGAT ATTGTGGAGCGTGGGAAAAA
Downstream 100 bases:
>100_bases ATCCAATATTTACAAATTGGAAACCTATTACGCGATAACCATTGATCCAATACATGTTGGGGTGGGAGGAACAAGACTAG AAAGAGTGGATCTTTCCATA
Product: CRISPR-associated protein, Csx11 family
Products: NA
Alternate protein names: Crispr-Associated Protein; Csx11 Family CRISPR-Associated Protein
Number of amino acids: Translated: 906; Mature: 905
Protein sequence:
>906_residues MSILKIVEENRVPILLAEIGAYLHDLGKATKDFIEGNSKEAGNQRPSHTPPKLFPDELRKILSEVKIDVLNEKASIMDFI EHHHNRELETVPKLVALISAVNNGFDGIDSGVDKGKVESKQSKEHTFISSAFGFENYKIEIDEIDRIKEEMYRKIEEHLT RFQKSSNDIETLYKVIFCTKKYYLLFLGETRRPANDVTLWDHSYSVATMMKCAVAQEFLKPENTFDPLHFDWKVFAVNFD VLGLLTKGIKIGDIKGYWKSVEKIFEEVKKMIEVTYPIGNEIFRDTKGIYFLTAAVELHELKEEILKKIRGIEPEIMACI TEIPLETKIPPEEQGDRKTIEAKKKELLLKSIPEARKKALERVSFPAYSEGFPCNEFGPENNKEVCPICRLRTVERGKEI CNHCLNRRTNRSQEWQMDPKSSIWIDEISDHNDRVALVVGMFKIDEWLNGSFIQTLTFNEPSTENASNPRNNDVRKHPSP ARIRRVWETTEEFIRETVFKGILNNYEYPALRKQRIELEINPNPKVPEGSTCDISISGVRFSPVCVDSVRGLFVTTINLE ILSKFGKTVKEIAEALSGQNIKLKTEPEKSWRDFRIAKAKPADDKYQDYLPYIKIYDFPDQFMILVPAYETLDIAEKIVE EYERQFSKVRDRLPLHLGVIAFHRRTPLYVVMDAAKRLLKKFESSKTIVVDVERVEDMKDPISGMSKKLLLRVNKRRIPL KWVVSYSTKDPDVEDLWYPYLRLCNKGKPNRKLCLDYTGNGNYVVHIKEIKEGDELEIEPSYFKLCYIEEASDRFYVDEN LKFLDDIHEIQNLWKIVERKLRSKKWTISQLYAFLEELEKIKEYNGETFEQFLRSSLINILDLDDSSNEYNLLKTSVEDS LFELCLYWNLQVRKEKIGKGDQNESL
Sequences:
>Translated_906_residues MSILKIVEENRVPILLAEIGAYLHDLGKATKDFIEGNSKEAGNQRPSHTPPKLFPDELRKILSEVKIDVLNEKASIMDFI EHHHNRELETVPKLVALISAVNNGFDGIDSGVDKGKVESKQSKEHTFISSAFGFENYKIEIDEIDRIKEEMYRKIEEHLT RFQKSSNDIETLYKVIFCTKKYYLLFLGETRRPANDVTLWDHSYSVATMMKCAVAQEFLKPENTFDPLHFDWKVFAVNFD VLGLLTKGIKIGDIKGYWKSVEKIFEEVKKMIEVTYPIGNEIFRDTKGIYFLTAAVELHELKEEILKKIRGIEPEIMACI TEIPLETKIPPEEQGDRKTIEAKKKELLLKSIPEARKKALERVSFPAYSEGFPCNEFGPENNKEVCPICRLRTVERGKEI CNHCLNRRTNRSQEWQMDPKSSIWIDEISDHNDRVALVVGMFKIDEWLNGSFIQTLTFNEPSTENASNPRNNDVRKHPSP ARIRRVWETTEEFIRETVFKGILNNYEYPALRKQRIELEINPNPKVPEGSTCDISISGVRFSPVCVDSVRGLFVTTINLE ILSKFGKTVKEIAEALSGQNIKLKTEPEKSWRDFRIAKAKPADDKYQDYLPYIKIYDFPDQFMILVPAYETLDIAEKIVE EYERQFSKVRDRLPLHLGVIAFHRRTPLYVVMDAAKRLLKKFESSKTIVVDVERVEDMKDPISGMSKKLLLRVNKRRIPL KWVVSYSTKDPDVEDLWYPYLRLCNKGKPNRKLCLDYTGNGNYVVHIKEIKEGDELEIEPSYFKLCYIEEASDRFYVDEN LKFLDDIHEIQNLWKIVERKLRSKKWTISQLYAFLEELEKIKEYNGETFEQFLRSSLINILDLDDSSNEYNLLKTSVEDS LFELCLYWNLQVRKEKIGKGDQNESL >Mature_905_residues SILKIVEENRVPILLAEIGAYLHDLGKATKDFIEGNSKEAGNQRPSHTPPKLFPDELRKILSEVKIDVLNEKASIMDFIE HHHNRELETVPKLVALISAVNNGFDGIDSGVDKGKVESKQSKEHTFISSAFGFENYKIEIDEIDRIKEEMYRKIEEHLTR FQKSSNDIETLYKVIFCTKKYYLLFLGETRRPANDVTLWDHSYSVATMMKCAVAQEFLKPENTFDPLHFDWKVFAVNFDV LGLLTKGIKIGDIKGYWKSVEKIFEEVKKMIEVTYPIGNEIFRDTKGIYFLTAAVELHELKEEILKKIRGIEPEIMACIT EIPLETKIPPEEQGDRKTIEAKKKELLLKSIPEARKKALERVSFPAYSEGFPCNEFGPENNKEVCPICRLRTVERGKEIC NHCLNRRTNRSQEWQMDPKSSIWIDEISDHNDRVALVVGMFKIDEWLNGSFIQTLTFNEPSTENASNPRNNDVRKHPSPA RIRRVWETTEEFIRETVFKGILNNYEYPALRKQRIELEINPNPKVPEGSTCDISISGVRFSPVCVDSVRGLFVTTINLEI LSKFGKTVKEIAEALSGQNIKLKTEPEKSWRDFRIAKAKPADDKYQDYLPYIKIYDFPDQFMILVPAYETLDIAEKIVEE YERQFSKVRDRLPLHLGVIAFHRRTPLYVVMDAAKRLLKKFESSKTIVVDVERVEDMKDPISGMSKKLLLRVNKRRIPLK WVVSYSTKDPDVEDLWYPYLRLCNKGKPNRKLCLDYTGNGNYVVHIKEIKEGDELEIEPSYFKLCYIEEASDRFYVDENL KFLDDIHEIQNLWKIVERKLRSKKWTISQLYAFLEELEKIKEYNGETFEQFLRSSLINILDLDDSSNEYNLLKTSVEDSL FELCLYWNLQVRKEKIGKGDQNESL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 105513; Mature: 105382
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILKIVEENRVPILLAEIGAYLHDLGKATKDFIEGNSKEAGNQRPSHTPPKLFPDELRK CCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH ILSEVKIDVLNEKASIMDFIEHHHNRELETVPKLVALISAVNNGFDGIDSGVDKGKVESK HHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCH QSKEHTFISSAFGFENYKIEIDEIDRIKEEMYRKIEEHLTRFQKSSNDIETLYKVIFCTK HHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC KYYLLFLGETRRPANDVTLWDHSYSVATMMKCAVAQEFLKPENTFDPLHFDWKVFAVNFD EEEEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEECEEEEEECHH VLGLLTKGIKIGDIKGYWKSVEKIFEEVKKMIEVTYPIGNEIFRDTKGIYFLTAAVELHE HHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEHHHHHHH LKEEILKKIRGIEPEIMACITEIPLETKIPPEEQGDRKTIEAKKKELLLKSIPEARKKAL HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH ERVSFPAYSEGFPCNEFGPENNKEVCPICRLRTVERGKEICNHCLNRRTNRSQEWQMDPK HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SSIWIDEISDHNDRVALVVGMFKIDEWLNGSFIQTLTFNEPSTENASNPRNNDVRKHPSP CCEEEECCCCCCCEEEEEEEHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCH ARIRRVWETTEEFIRETVFKGILNNYEYPALRKQRIELEINPNPKVPEGSTCDISISGVR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCEE FSPVCVDSVRGLFVTTINLEILSKFGKTVKEIAEALSGQNIKLKTEPEKSWRDFRIAKAK ECCCHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHCEEEECCC PADDKYQDYLPYIKIYDFPDQFMILVPAYETLDIAEKIVEEYERQFSKVRDRLPLHLGVI CCCCCHHHCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHE AFHRRTPLYVVMDAAKRLLKKFESSKTIVVDVERVEDMKDPISGMSKKLLLRVNKRRIPL EEECCCCEEEEHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCE KWVVSYSTKDPDVEDLWYPYLRLCNKGKPNRKLCLDYTGNGNYVVHIKEIKEGDELEIEP EEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEECCCCCCEEECC SYFKLCYIEEASDRFYVDENLKFLDDIHEIQNLWKIVERKLRSKKWTISQLYAFLEELEK CEEEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH IKEYNGETFEQFLRSSLINILDLDDSSNEYNLLKTSVEDSLFELCLYWNLQVRKEKIGKG HHHCCCHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEEHHHHCCCC DQNESL CCCCCC >Mature Secondary Structure SILKIVEENRVPILLAEIGAYLHDLGKATKDFIEGNSKEAGNQRPSHTPPKLFPDELRK CHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH ILSEVKIDVLNEKASIMDFIEHHHNRELETVPKLVALISAVNNGFDGIDSGVDKGKVESK HHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCH QSKEHTFISSAFGFENYKIEIDEIDRIKEEMYRKIEEHLTRFQKSSNDIETLYKVIFCTK HHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC KYYLLFLGETRRPANDVTLWDHSYSVATMMKCAVAQEFLKPENTFDPLHFDWKVFAVNFD EEEEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEECEEEEEECHH VLGLLTKGIKIGDIKGYWKSVEKIFEEVKKMIEVTYPIGNEIFRDTKGIYFLTAAVELHE HHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEHHHHHHH LKEEILKKIRGIEPEIMACITEIPLETKIPPEEQGDRKTIEAKKKELLLKSIPEARKKAL HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHH ERVSFPAYSEGFPCNEFGPENNKEVCPICRLRTVERGKEICNHCLNRRTNRSQEWQMDPK HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SSIWIDEISDHNDRVALVVGMFKIDEWLNGSFIQTLTFNEPSTENASNPRNNDVRKHPSP CCEEEECCCCCCCEEEEEEEHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCH ARIRRVWETTEEFIRETVFKGILNNYEYPALRKQRIELEINPNPKVPEGSTCDISISGVR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCEE FSPVCVDSVRGLFVTTINLEILSKFGKTVKEIAEALSGQNIKLKTEPEKSWRDFRIAKAK ECCCHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHCEEEECCC PADDKYQDYLPYIKIYDFPDQFMILVPAYETLDIAEKIVEEYERQFSKVRDRLPLHLGVI CCCCCHHHCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHE AFHRRTPLYVVMDAAKRLLKKFESSKTIVVDVERVEDMKDPISGMSKKLLLRVNKRRIPL EEECCCCEEEEHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCE KWVVSYSTKDPDVEDLWYPYLRLCNKGKPNRKLCLDYTGNGNYVVHIKEIKEGDELEIEP EEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEECCCCCCEEECC SYFKLCYIEEASDRFYVDENLKFLDDIHEIQNLWKIVERKLRSKKWTISQLYAFLEELEK CEEEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH IKEYNGETFEQFLRSSLINILDLDDSSNEYNLLKTSVEDSLFELCLYWNLQVRKEKIGKG HHHCCCHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCEEHHHHCCCC DQNESL CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA