| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617643
Identifier: 239617643
GI number: 239617643
Start: 1341656
End: 1342348
Strand: Reverse
Name: 239617643
Synonym: Kole_1264
Alternate gene names: NA
Gene position: 1342348-1341656 (Counterclockwise)
Preceding gene: 239617644
Following gene: 239617642
Centisome position: 58.31
GC content: 39.68
Gene sequence:
>693_bases ATGCCAAGAAGCGCGAGGGTTGTTCTCGAGGGTATTGCTCATCATGTAACGCAAAGGGGTAATTATCGTCAAAGTGTTTT TGAGGATCCTGAAGATAGAATCAAATATCTTGAATTCATTAAGGAATATTCAGCTAAACATGGGCTCAAGATATATGCGT ATTGCCTCATGACCAATCATGTTCATTTTATCGCTGTCCCTGAAAGAGAAGATTCTCTAGCCATGGCTTTTAAGTACGCT CATATGAGATACTCACAGTATTTTAATCGAAAACATCATAGAACGGGACATCTCTGGCAGGGAAGATTCTATTCCTGCCC TCTCGATCAAGAACATGCTATTTCGGCTGTTAAATATGTTGAGCGAAACCCCGTAAGAGCAAAGATAGTTGAATTTCCCT GGGATTATGAATGGTCGAGCGCTAGGGTACGTGTAAAAGAAAATGGGGACACACGGAGGGAAAGTCCCCATTTTCTTCAC TTAAGCGATTTGTCAGATTTTGGATTTAACTGGAATCCTGACGGATGGAAAGAATATCTTGGATATCCGGATAGTAATGA TTTTCTTTCTAATATACGAAGGAATACTTCTACTGGAAGATTATTTTTTAACGACGAAAAAATTGCTAAATTTGAAGAGG TTTTGGGCCTCCCACTGAAAAGAAGGCCAAAAGGCAGACCAAAGAAAAGGTAA
Upstream 100 bases:
>100_bases TACAAGAAAATCTCCTACTTCTTCATTCTACAAGAAAATAGGGACAGACACCAATATTTTATGGTATGATCGGGTATCTT GGTTGCCAAGTGGTGATGAA
Downstream 100 bases:
>100_bases TGTTTACAAGGCTTGGCGCTGCACGGCGGACGCGAACTGCTTGTGGTTGTCTCGAACTCGTGATAAGAATCCGAGAATCC GAGAGTCCGAGAACCGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives; Conserved Domain Protein; Transposase Of ISGbem_B; Transposase Family Protein; Transposase And Inactivated Derivatives Protein; Transposase-Like Protein; Transposase Or Inactivated Derivative; Methionine-R-Sulfoxide Reductase; Transposase Domain-Containing Protein
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MPRSARVVLEGIAHHVTQRGNYRQSVFEDPEDRIKYLEFIKEYSAKHGLKIYAYCLMTNHVHFIAVPEREDSLAMAFKYA HMRYSQYFNRKHHRTGHLWQGRFYSCPLDQEHAISAVKYVERNPVRAKIVEFPWDYEWSSARVRVKENGDTRRESPHFLH LSDLSDFGFNWNPDGWKEYLGYPDSNDFLSNIRRNTSTGRLFFNDEKIAKFEEVLGLPLKRRPKGRPKKR
Sequences:
>Translated_230_residues MPRSARVVLEGIAHHVTQRGNYRQSVFEDPEDRIKYLEFIKEYSAKHGLKIYAYCLMTNHVHFIAVPEREDSLAMAFKYA HMRYSQYFNRKHHRTGHLWQGRFYSCPLDQEHAISAVKYVERNPVRAKIVEFPWDYEWSSARVRVKENGDTRRESPHFLH LSDLSDFGFNWNPDGWKEYLGYPDSNDFLSNIRRNTSTGRLFFNDEKIAKFEEVLGLPLKRRPKGRPKKR >Mature_229_residues PRSARVVLEGIAHHVTQRGNYRQSVFEDPEDRIKYLEFIKEYSAKHGLKIYAYCLMTNHVHFIAVPEREDSLAMAFKYAH MRYSQYFNRKHHRTGHLWQGRFYSCPLDQEHAISAVKYVERNPVRAKIVEFPWDYEWSSARVRVKENGDTRRESPHFLHL SDLSDFGFNWNPDGWKEYLGYPDSNDFLSNIRRNTSTGRLFFNDEKIAKFEEVLGLPLKRRPKGRPKKR
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27427; Mature: 27296
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSARVVLEGIAHHVTQRGNYRQSVFEDPEDRIKYLEFIKEYSAKHGLKIYAYCLMTNH CCCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCC VHFIAVPEREDSLAMAFKYAHMRYSQYFNRKHHRTGHLWQGRFYSCPLDQEHAISAVKYV EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEECCCCHHHHHHHHHHH ERNPVRAKIVEFPWDYEWSSARVRVKENGDTRRESPHFLHLSDLSDFGFNWNPDGWKEYL HCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHC GYPDSNDFLSNIRRNTSTGRLFFNDEKIAKFEEVLGLPLKRRPKGRPKKR CCCCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PRSARVVLEGIAHHVTQRGNYRQSVFEDPEDRIKYLEFIKEYSAKHGLKIYAYCLMTNH CCHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCC VHFIAVPEREDSLAMAFKYAHMRYSQYFNRKHHRTGHLWQGRFYSCPLDQEHAISAVKYV EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEECCCCHHHHHHHHHHH ERNPVRAKIVEFPWDYEWSSARVRVKENGDTRRESPHFLHLSDLSDFGFNWNPDGWKEYL HCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHC GYPDSNDFLSNIRRNTSTGRLFFNDEKIAKFEEVLGLPLKRRPKGRPKKR CCCCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA