| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617546
Identifier: 239617546
GI number: 239617546
Start: 1231876
End: 1232706
Strand: Direct
Name: 239617546
Synonym: Kole_1164
Alternate gene names: NA
Gene position: 1231876-1232706 (Clockwise)
Preceding gene: 239617545
Following gene: 239617547
Centisome position: 53.51
GC content: 45.01
Gene sequence:
>831_bases ATGAGCGTTCAAGCAATAGTTCAAGAAATGAGGGCATCATGGGCTTTTATTGTTAGAAATTTCAATCTGTCAAAACGTTA CTGGAAATGGGAACTGGTGTTTCTCGTTTATACAATTGCAAATTCGGTGACCATGGGGTTCATCGGAAAAGGTGTCGAGT CCTTCTCTGATGGCTCTTTCGATACCAACTATCTGATACTCTATATGTTGCTCGGATCGATTCTCTGGGGTTATCTTTCA GTTCTTTTCGCAATAGTTGCCGAAACAGTTGCCTGGGAACGCTGGGAAGAAACGATAGAATACACCTTCATGGCTCCGGT AAAAAGAGCAACGCACCTTTTAAGCGTTTGTGGATACGCGATACTTTACGGAATATTGAGGGCTGGTTTAATACTGCTCG TGGTTTCAATCTTTTTCGATCTCAACCTGGCTAATGCGAACCTGTTGTCCGCAGCGGGAATCCTAGCTGTAGCTAGTTTC TCTTTCATAGGTCTTGGGATGGTTGCGGCAGTACTTCCGCTAATATCCCCTGAAAAGGGCGTACAGGTTGTGCATATATT TCAGGCATTACTACTGATGTTCTCAGGGGTTTACTATGAAATAACCGTTCTCCCTGACTGGATGCAGAAAGTGGCGAAAC TATCACCGGCAACTTATGCGTTAGCCGGTATGAGAAGTGCCATATTGCATGGTAAGAGTTTCTCTGAGTTATGGAGTCAG GTGTGGCCGTTGATATTTCTAGGGGCGGTTTTGCTCCCCTTTGGGATCTATTTCTTCAGCGTGATGGAGTTCTGGGCGAA GAAGAAAGGCGTACTAAAAAGGAGCGGGTGA
Upstream 100 bases:
>100_bases AAATTTCCGACAAAGTTCATAATCCAACTTTTGAAGATGTCTTCATGGAATTCACTGGTGTAAGATTCGACGAAGCGGAA TATGAGGAGGTTGAAACCCT
Downstream 100 bases:
>100_bases GCTTTCCCCGCTCTTTTCTACGTCTGCTAAAATATAATGGTATAAAAACTTACGGAGGTAATTATGATACTATCTCTCAG CAAAGTCGGACACGATTATG
Product: ABC-2 type transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSVQAIVQEMRASWAFIVRNFNLSKRYWKWELVFLVYTIANSVTMGFIGKGVESFSDGSFDTNYLILYMLLGSILWGYLS VLFAIVAETVAWERWEETIEYTFMAPVKRATHLLSVCGYAILYGILRAGLILLVVSIFFDLNLANANLLSAAGILAVASF SFIGLGMVAAVLPLISPEKGVQVVHIFQALLLMFSGVYYEITVLPDWMQKVAKLSPATYALAGMRSAILHGKSFSELWSQ VWPLIFLGAVLLPFGIYFFSVMEFWAKKKGVLKRSG
Sequences:
>Translated_276_residues MSVQAIVQEMRASWAFIVRNFNLSKRYWKWELVFLVYTIANSVTMGFIGKGVESFSDGSFDTNYLILYMLLGSILWGYLS VLFAIVAETVAWERWEETIEYTFMAPVKRATHLLSVCGYAILYGILRAGLILLVVSIFFDLNLANANLLSAAGILAVASF SFIGLGMVAAVLPLISPEKGVQVVHIFQALLLMFSGVYYEITVLPDWMQKVAKLSPATYALAGMRSAILHGKSFSELWSQ VWPLIFLGAVLLPFGIYFFSVMEFWAKKKGVLKRSG >Mature_275_residues SVQAIVQEMRASWAFIVRNFNLSKRYWKWELVFLVYTIANSVTMGFIGKGVESFSDGSFDTNYLILYMLLGSILWGYLSV LFAIVAETVAWERWEETIEYTFMAPVKRATHLLSVCGYAILYGILRAGLILLVVSIFFDLNLANANLLSAAGILAVASFS FIGLGMVAAVLPLISPEKGVQVVHIFQALLLMFSGVYYEITVLPDWMQKVAKLSPATYALAGMRSAILHGKSFSELWSQV WPLIFLGAVLLPFGIYFFSVMEFWAKKKGVLKRSG
Specific function: Unknown
COG id: COG0842
COG function: function code V; ABC-type multidrug transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30866; Mature: 30735
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS51012 ABC_TM2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVQAIVQEMRASWAFIVRNFNLSKRYWKWELVFLVYTIANSVTMGFIGKGVESFSDGSF CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC DTNYLILYMLLGSILWGYLSVLFAIVAETVAWERWEETIEYTFMAPVKRATHLLSVCGYA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILYGILRAGLILLVVSIFFDLNLANANLLSAAGILAVASFSFIGLGMVAAVLPLISPEKG HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VQVVHIFQALLLMFSGVYYEITVLPDWMQKVAKLSPATYALAGMRSAILHGKSFSELWSQ HHHHHHHHHHHHHHCCHHEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHH VWPLIFLGAVLLPFGIYFFSVMEFWAKKKGVLKRSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SVQAIVQEMRASWAFIVRNFNLSKRYWKWELVFLVYTIANSVTMGFIGKGVESFSDGSF CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCC DTNYLILYMLLGSILWGYLSVLFAIVAETVAWERWEETIEYTFMAPVKRATHLLSVCGYA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILYGILRAGLILLVVSIFFDLNLANANLLSAAGILAVASFSFIGLGMVAAVLPLISPEKG HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VQVVHIFQALLLMFSGVYYEITVLPDWMQKVAKLSPATYALAGMRSAILHGKSFSELWSQ HHHHHHHHHHHHHHCCHHEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHH VWPLIFLGAVLLPFGIYFFSVMEFWAKKKGVLKRSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA