| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617542
Identifier: 239617542
GI number: 239617542
Start: 1227114
End: 1227839
Strand: Direct
Name: 239617542
Synonym: Kole_1159
Alternate gene names: NA
Gene position: 1227114-1227839 (Clockwise)
Preceding gene: 239617541
Following gene: 239617543
Centisome position: 53.3
GC content: 39.53
Gene sequence:
>726_bases ATGAAGAACTTTATAAAAGAAAATAAACTGCTGGTTATTACCGCTGTCCTGTATTTGGTGGTTTTCTTTTTTAATCCAGG ATTATTCAACAATGCGGTTAAAATGACTGGTAAATTCCTTCTTGAAATGATCGAGGTAATGCCTCCAATTCTTTTGTTAT CGGCTCTTATAACGGTTTGGGTACCTTCAGAGGTTATTACAAAGAACTTTGGTAAAGAATCGGGGATCAAAGGAAAACTC ATATCTGTTTTTATAGGATCTGTGTCTGCCGGTCCGATATATGCAGCTTTTCCAATGGCGCTAACACTTTTTTACAAAGG TGCTAGCGTATCGAATATAGTTATCATAATAAGCGCATGGGCTGTGGTAAAAGTCCCTATGTTTATGATCGAATCGAGCT TTCTTGGACTTAAATTTGCCGCGATAAGGTATCTCCTGACAGTGCCGGCGATTGTAGCTCTTGGGTACCTGATGGACAAA CTGGTTAAAAGAGAAGATATCCTAAAAGAACAAAGTCAAATTGAGAAAGAGACAAACCTTACTGAAAAGCACATCTTGCG GAAGCTTCCCCGCTTTGACTGTGGTGGTTGTGGCTATAAAGATTGTGCCTCATTTGCGAAAGCTGTGTACGCAGGCGAAG CAACCATAAGTGAGTGTGTTATTAAAAGCAAAAATCGAGAATCAGAAACCGGAGTTCAAGAACCGTTATTAGAGACTGGA GATTAA
Upstream 100 bases:
>100_bases CCATAGAAGTACGTCATTTTGGTAAGAAATTTACCTTTTATAGAAACGCTTTGAGTTTTGTTTTCGCTATTGGTATAGCG TTGGGTATGGGGGTGTTGCT
Downstream 100 bases:
>100_bases GCAATAGAGATCGGTACCATGGGAATCGGGAAAAATATGCCATCTCCATCAAAGCGTTTACATTTTCACTCTTTCGGTAT TCGTACATTTTATTCCTCCT
Product: Fe-S cluster domain protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MKNFIKENKLLVITAVLYLVVFFFNPGLFNNAVKMTGKFLLEMIEVMPPILLLSALITVWVPSEVITKNFGKESGIKGKL ISVFIGSVSAGPIYAAFPMALTLFYKGASVSNIVIIISAWAVVKVPMFMIESSFLGLKFAAIRYLLTVPAIVALGYLMDK LVKREDILKEQSQIEKETNLTEKHILRKLPRFDCGGCGYKDCASFAKAVYAGEATISECVIKSKNRESETGVQEPLLETG D
Sequences:
>Translated_241_residues MKNFIKENKLLVITAVLYLVVFFFNPGLFNNAVKMTGKFLLEMIEVMPPILLLSALITVWVPSEVITKNFGKESGIKGKL ISVFIGSVSAGPIYAAFPMALTLFYKGASVSNIVIIISAWAVVKVPMFMIESSFLGLKFAAIRYLLTVPAIVALGYLMDK LVKREDILKEQSQIEKETNLTEKHILRKLPRFDCGGCGYKDCASFAKAVYAGEATISECVIKSKNRESETGVQEPLLETG D >Mature_241_residues MKNFIKENKLLVITAVLYLVVFFFNPGLFNNAVKMTGKFLLEMIEVMPPILLLSALITVWVPSEVITKNFGKESGIKGKL ISVFIGSVSAGPIYAAFPMALTLFYKGASVSNIVIIISAWAVVKVPMFMIESSFLGLKFAAIRYLLTVPAIVALGYLMDK LVKREDILKEQSQIEKETNLTEKHILRKLPRFDCGGCGYKDCASFAKAVYAGEATISECVIKSKNRESETGVQEPLLETG D
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26588; Mature: 26588
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNFIKENKLLVITAVLYLVVFFFNPGLFNNAVKMTGKFLLEMIEVMPPILLLSALITVW CCCCHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPSEVITKNFGKESGIKGKLISVFIGSVSAGPIYAAFPMALTLFYKGASVSNIVIIISAW CCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEHEEHH AVVKVPMFMIESSFLGLKFAAIRYLLTVPAIVALGYLMDKLVKREDILKEQSQIEKETNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TEKHILRKLPRFDCGGCGYKDCASFAKAVYAGEATISECVIKSKNRESETGVQEPLLETG HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHCCC D C >Mature Secondary Structure MKNFIKENKLLVITAVLYLVVFFFNPGLFNNAVKMTGKFLLEMIEVMPPILLLSALITVW CCCCHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPSEVITKNFGKESGIKGKLISVFIGSVSAGPIYAAFPMALTLFYKGASVSNIVIIISAW CCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEHEEHH AVVKVPMFMIESSFLGLKFAAIRYLLTVPAIVALGYLMDKLVKREDILKEQSQIEKETNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TEKHILRKLPRFDCGGCGYKDCASFAKAVYAGEATISECVIKSKNRESETGVQEPLLETG HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHCCC D C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA