| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is crp [C]
Identifier: 239617539
GI number: 239617539
Start: 1225087
End: 1225761
Strand: Direct
Name: crp [C]
Synonym: Kole_1156
Alternate gene names: 239617539
Gene position: 1225087-1225761 (Clockwise)
Preceding gene: 239617536
Following gene: 239617540
Centisome position: 53.22
GC content: 37.04
Gene sequence:
>675_bases ATGAATCCACTAATTCTAAACCTTGCACGTTCAAAGCTTTTTAAAGGATTAACCGTTGGAGAACTTGAAACAATTTTTCG AGAAATTTTGTATCGTATCGAAAAGTACAAAGCCGGTGAATTTGTCCGTTTTCGTGGAGACAGTTGTGATGATCTCCTGA TTCTTCTGGATGGTAAGGTTAAAACGGAGATGCAAGACTTTAATGGAAAAGTCGTCAGGATAGAAGTAATGGACGCACCA AGCCTTTTAGCTTCAGGTTTCTTATTTGCCACCGATAATGTATTTCCCGTTGACGTTATCACGATTACTGATTGTTCATT CCTGACAATACCGAAAAAATCAGTAATTAATCTTTGTAGAAAAAACGAAAAGTTTCTGTTGAATCTTCTGCAAGATATGG GGGATAGATTGGTATTTCTCTCGGAAAAACTCTATATGCTGACGTTGAGAACCCTCAAAGAGAAGATAGCTGATTATATC CTTTCGCTTTGCAAAGATAAACAATGTGAAGTATCTGTTCCTCTAACAAAAGAAGAGCTTTCACAGGTATTTGGGGTTGC AAGGCCTTCGCTTTCACGTGCTTTTGCCGATCTTGCAAGAGATGGAATTTTAGAAATGGATGGAAGGAAGATAATCATAA AGGATTTTGAAAAGTTAAAGGCCCTTATAAAATAA
Upstream 100 bases:
>100_bases GCTCATATAAATTCCTCCTTTTTTAGTTGGTTTTTCTTTTCAATTCCAGTATAATTTTTTTGAATCATTCAATCGGTAAC ATATGTTACGGAGGATAGAG
Downstream 100 bases:
>100_bases GATTTTTAGCGAGGCATCATCGCAAATTAAAACTACGGCTGATGCGTTGTGCCCGGTGTGTAACAGTGCACCGGGCAAAT TAATGCGGTATTATAGGAAG
Product: Crp/Fnr family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulatory Protein; Transcription Regulator CRP Family; Crp Family Transcriptional Regulator; Transcriptional Regulator Crp Family; Regulatory Protein; Fnr-Like Transcriptional Activator; Catabolite Gene Activator; Crp/Fnr Family Transcriptional Regulator; CAMP-Bindin Transcriptional Regulator; CAMP-Regulatory Protein
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MNPLILNLARSKLFKGLTVGELETIFREILYRIEKYKAGEFVRFRGDSCDDLLILLDGKVKTEMQDFNGKVVRIEVMDAP SLLASGFLFATDNVFPVDVITITDCSFLTIPKKSVINLCRKNEKFLLNLLQDMGDRLVFLSEKLYMLTLRTLKEKIADYI LSLCKDKQCEVSVPLTKEELSQVFGVARPSLSRAFADLARDGILEMDGRKIIIKDFEKLKALIK
Sequences:
>Translated_224_residues MNPLILNLARSKLFKGLTVGELETIFREILYRIEKYKAGEFVRFRGDSCDDLLILLDGKVKTEMQDFNGKVVRIEVMDAP SLLASGFLFATDNVFPVDVITITDCSFLTIPKKSVINLCRKNEKFLLNLLQDMGDRLVFLSEKLYMLTLRTLKEKIADYI LSLCKDKQCEVSVPLTKEELSQVFGVARPSLSRAFADLARDGILEMDGRKIIIKDFEKLKALIK >Mature_224_residues MNPLILNLARSKLFKGLTVGELETIFREILYRIEKYKAGEFVRFRGDSCDDLLILLDGKVKTEMQDFNGKVVRIEVMDAP SLLASGFLFATDNVFPVDVITITDCSFLTIPKKSVINLCRKNEKFLLNLLQDMGDRLVFLSEKLYMLTLRTLKEKIADYI LSLCKDKQCEVSVPLTKEELSQVFGVARPSLSRAFADLARDGILEMDGRKIIIKDFEKLKALIK
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25509; Mature: 25509
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPLILNLARSKLFKGLTVGELETIFREILYRIEKYKAGEFVRFRGDSCDDLLILLDGKV CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCH KTEMQDFNGKVVRIEVMDAPSLLASGFLFATDNVFPVDVITITDCSFLTIPKKSVINLCR HHHHHHCCCCEEEEEEECCHHHHHCCCEEEECCCCEEEEEEECCCCEEECCHHHHHHHHH KNEKFLLNLLQDMGDRLVFLSEKLYMLTLRTLKEKIADYILSLCKDKQCEVSVPLTKEEL CCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHH SQVFGVARPSLSRAFADLARDGILEMDGRKIIIKDFEKLKALIK HHHHHCCCHHHHHHHHHHHHCCCEEECCCEEEHHHHHHHHHHHC >Mature Secondary Structure MNPLILNLARSKLFKGLTVGELETIFREILYRIEKYKAGEFVRFRGDSCDDLLILLDGKV CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCH KTEMQDFNGKVVRIEVMDAPSLLASGFLFATDNVFPVDVITITDCSFLTIPKKSVINLCR HHHHHHCCCCEEEEEEECCHHHHHCCCEEEECCCCEEEEEEECCCCEEECCHHHHHHHHH KNEKFLLNLLQDMGDRLVFLSEKLYMLTLRTLKEKIADYILSLCKDKQCEVSVPLTKEEL CCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHH SQVFGVARPSLSRAFADLARDGILEMDGRKIIIKDFEKLKALIK HHHHHCCCHHHHHHHHHHHHCCCEEECCCEEEHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA