| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is hcp
Identifier: 239617537
GI number: 239617537
Start: 1222082
End: 1223752
Strand: Reverse
Name: hcp
Synonym: Kole_1154
Alternate gene names: 239617537
Gene position: 1223752-1222082 (Counterclockwise)
Preceding gene: 239617538
Following gene: 239617534
Centisome position: 53.16
GC content: 43.87
Gene sequence:
>1671_bases ATGAGTATGTTCTGTTACCAATGTTCTGAAACTCTCAACGGAAAGGCCTGTACAGTGGCAGGAGTTTGTGGGAAAGACCC GGAAACATCTAACCTGCTCGATCTTCTTGTATGGGTTCTAAAGGGAATTTCCTTCTGGGCTACCGAAGCGAGGAAACTCG GTGTAGATGATCCAGAAGTGAACCTATTTGTGGCAGAAGGACTTTTTACAACTATAACCAACGTGAATTTCGATCCCGAA AGCATCGGTAAGAAAATCGAAAAGGCTTTTGCATTAAGGGAAAGAATCATGAAGGCCACAAAAGAGGCTTACAAAGAACA GTACGGAAAAGAATTCTCTAAAGAAGTTCCTGAAGCTGCAACATGGTATGTTCCCGGAGATTTAAGTGTCTGGGAACTTA AAGGTGCAGAAGTAGGCGCTCTTTCCACAAAAGATGAAGACATAAGATCCCTGAGGGAACTGCTTACCTATGGATTGAAA GGAATCGCCGCTTATACAGACCATGCTTACATTCTGCAAAAGTTCAATGATGAGATTCTCCACTTCTTACAGGAAGGTCT CGCTGCGACCCTGGACGACTCATTGACGGTAAATGATTATGTTGCTCTTGTAATGAAAGCTGGAGAATTTGCTGTTAAAG CCATGCAGCTTCTGGATGAAGCGAACACATCCCGTTACGGAAATCCAGAAATTACTGAAGTTTATACCGGTACGCTCCCC GGACCCGCGATACTGGTGAGCGGACACGACCTTCTCGACCTCGAAGAAATCCTGAAGCAAACGGAAGGCAAAGGAATAAA TGTCTATACTCATGGAGAAATGCTTCCCGCTCATGCCTATCCAGAGCTCAAGAAATACAAGCATCTTGTTGGAAACTACG GAACTTCCTGGTACAACCAGCAAAAAGAGTTTGCTCAATTTAACGGTGCAATTGTTATGACAACGAACTGTATCCAGAAA CCTCTCGAGAGCTATAAAGATAGGATATTCACAACGGGTCTTGTTGGTTGGCCTGGAGTGAAGCATATACCCAATCGAAC AGATGGAGGTCAAAAAGATTTCACCCCTGTTATCGAAAAAGCCCTTGAACTGGGTGGATTGGAAGAAAAACCCGGAAAGA AAATAGTGATCGGTTTCGCTCATGAACAAACAGCTCAAGTAGCAGACAAGATAATAGAAGCAGTGAAAGCTGGAAAGATT AAACGCTTCGTCGTTATGGCCGGATGTGATGGAAGAGCGAAAGAGCGTGAATACTACACAGAAATGGCTAAGAGATTACC CAAAGAAACCGTCATATTGACAGCCGGGTGTGCAAAATACCGATACAACATGCTTGATCTCGGTGATATCGATGGTATCC CAAGAGTAATAGATGCGGGGCAGTGTAATGATTCTTACTCACTAGTTGTTACAGCGCTTCGATTGAAGGAAGCTTTCGGC CTTGATGATATTAACGACCTACCGATCTCTTATGATATCGCGTGGTATGAACAAAAAGCCGTTGCTGTTCTTCTCGCGTT ACTTTACCTCGGTGTCAAAGGCATAAGGCTCGGACCGGTTTTGCCCGCATTCCTTTCGCCGAATGTTCTTAAAGTTCTTG TGGAGAATTTTGATATAAAACCGATATCAACTGTCGAACAAGATCTTGAACTGATCCTTCAGGGCAAGTAA
Upstream 100 bases:
>100_bases GAAATAACACAGGATATTGTTCCTATACAAAAGATAACAGGTGAAAAAAGAATATATGATGATCTTGAATCTTAACACAT CCATAGAGGGGGTGCTTTGA
Downstream 100 bases:
>100_bases TAAAGCAATAAAATTAGAAAAAAACCGGTAGCCATCGTTGCTACCGGTTTTTTTGGCTAACCTTTTGTTTCTATTTCCCC GGTAAGTTTAGTAGCAATCT
Product: hydroxylamine reductase
Products: NA
Alternate protein names: Hybrid-cluster protein; HCP
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MSMFCYQCSETLNGKACTVAGVCGKDPETSNLLDLLVWVLKGISFWATEARKLGVDDPEVNLFVAEGLFTTITNVNFDPE SIGKKIEKAFALRERIMKATKEAYKEQYGKEFSKEVPEAATWYVPGDLSVWELKGAEVGALSTKDEDIRSLRELLTYGLK GIAAYTDHAYILQKFNDEILHFLQEGLAATLDDSLTVNDYVALVMKAGEFAVKAMQLLDEANTSRYGNPEITEVYTGTLP GPAILVSGHDLLDLEEILKQTEGKGINVYTHGEMLPAHAYPELKKYKHLVGNYGTSWYNQQKEFAQFNGAIVMTTNCIQK PLESYKDRIFTTGLVGWPGVKHIPNRTDGGQKDFTPVIEKALELGGLEEKPGKKIVIGFAHEQTAQVADKIIEAVKAGKI KRFVVMAGCDGRAKEREYYTEMAKRLPKETVILTAGCAKYRYNMLDLGDIDGIPRVIDAGQCNDSYSLVVTALRLKEAFG LDDINDLPISYDIAWYEQKAVAVLLALLYLGVKGIRLGPVLPAFLSPNVLKVLVENFDIKPISTVEQDLELILQGK
Sequences:
>Translated_556_residues MSMFCYQCSETLNGKACTVAGVCGKDPETSNLLDLLVWVLKGISFWATEARKLGVDDPEVNLFVAEGLFTTITNVNFDPE SIGKKIEKAFALRERIMKATKEAYKEQYGKEFSKEVPEAATWYVPGDLSVWELKGAEVGALSTKDEDIRSLRELLTYGLK GIAAYTDHAYILQKFNDEILHFLQEGLAATLDDSLTVNDYVALVMKAGEFAVKAMQLLDEANTSRYGNPEITEVYTGTLP GPAILVSGHDLLDLEEILKQTEGKGINVYTHGEMLPAHAYPELKKYKHLVGNYGTSWYNQQKEFAQFNGAIVMTTNCIQK PLESYKDRIFTTGLVGWPGVKHIPNRTDGGQKDFTPVIEKALELGGLEEKPGKKIVIGFAHEQTAQVADKIIEAVKAGKI KRFVVMAGCDGRAKEREYYTEMAKRLPKETVILTAGCAKYRYNMLDLGDIDGIPRVIDAGQCNDSYSLVVTALRLKEAFG LDDINDLPISYDIAWYEQKAVAVLLALLYLGVKGIRLGPVLPAFLSPNVLKVLVENFDIKPISTVEQDLELILQGK >Mature_555_residues SMFCYQCSETLNGKACTVAGVCGKDPETSNLLDLLVWVLKGISFWATEARKLGVDDPEVNLFVAEGLFTTITNVNFDPES IGKKIEKAFALRERIMKATKEAYKEQYGKEFSKEVPEAATWYVPGDLSVWELKGAEVGALSTKDEDIRSLRELLTYGLKG IAAYTDHAYILQKFNDEILHFLQEGLAATLDDSLTVNDYVALVMKAGEFAVKAMQLLDEANTSRYGNPEITEVYTGTLPG PAILVSGHDLLDLEEILKQTEGKGINVYTHGEMLPAHAYPELKKYKHLVGNYGTSWYNQQKEFAQFNGAIVMTTNCIQKP LESYKDRIFTTGLVGWPGVKHIPNRTDGGQKDFTPVIEKALELGGLEEKPGKKIVIGFAHEQTAQVADKIIEAVKAGKIK RFVVMAGCDGRAKEREYYTEMAKRLPKETVILTAGCAKYRYNMLDLGDIDGIPRVIDAGQCNDSYSLVVTALRLKEAFGL DDINDLPISYDIAWYEQKAVAVLLALLYLGVKGIRLGPVLPAFLSPNVLKVLVENFDIKPISTVEQDLELILQGK
Specific function: Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O
COG id: COG1151
COG function: function code C; 6Fe-6S prismane cluster-containing protein
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HCP family
Homologues:
Organism=Escherichia coli, GI87081794, Length=562, Percent_Identity=44.1281138790036, Blast_Score=464, Evalue=1e-132,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HCP_KOSOT (C5CIJ2)
Other databases:
- EMBL: CP001634 - RefSeq: YP_002940859.1 - GeneID: 7967944 - GenomeReviews: CP001634_GR - KEGG: kol:Kole_1154 - ProtClustDB: PRK05290 - GO: GO:0005737 - HAMAP: MF_00069 - InterPro: IPR010048 - InterPro: IPR004137 - InterPro: IPR011254 - InterPro: IPR016099 - InterPro: IPR016100 - Gene3D: G3DSA:3.40.50.2030 - Gene3D: G3DSA:1.20.1270.20 - PIRSF: PIRSF000076 - TIGRFAMs: TIGR01703
Pfam domain/function: PF03063 Prismane; SSF56821 Prismane_like
EC number: NA
Molecular weight: Translated: 61638; Mature: 61506
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMFCYQCSETLNGKACTVAGVCGKDPETSNLLDLLVWVLKGISFWATEARKLGVDDPEV CCEEHEEHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCC NLFVAEGLFTTITNVNFDPESIGKKIEKAFALRERIMKATKEAYKEQYGKEFSKEVPEAA EEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE TWYVPGDLSVWELKGAEVGALSTKDEDIRSLRELLTYGLKGIAAYTDHAYILQKFNDEIL EEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH HFLQEGLAATLDDSLTVNDYVALVMKAGEFAVKAMQLLDEANTSRYGNPEITEVYTGTLP HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCC GPAILVSGHDLLDLEEILKQTEGKGINVYTHGEMLPAHAYPELKKYKHLVGNYGTSWYNQ CCEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHH QKEFAQFNGAIVMTTNCIQKPLESYKDRIFTTGLVGWPGVKHIPNRTDGGQKDFTPVIEK HHHHHHHCCEEEEEHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCHHHHHH ALELGGLEEKPGKKIVIGFAHEQTAQVADKIIEAVKAGKIKRFVVMAGCDGRAKEREYYT HHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHH EMAKRLPKETVILTAGCAKYRYNMLDLGDIDGIPRVIDAGQCNDSYSLVVTALRLKEAFG HHHHHCCCCEEEEEECHHHHHCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCC LDDINDLPISYDIAWYEQKAVAVLLALLYLGVKGIRLGPVLPAFLSPNVLKVLVENFDIK CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHCCCCC PISTVEQDLELILQGK CHHHHHHHHHHHHCCC >Mature Secondary Structure SMFCYQCSETLNGKACTVAGVCGKDPETSNLLDLLVWVLKGISFWATEARKLGVDDPEV CEEHEEHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCC NLFVAEGLFTTITNVNFDPESIGKKIEKAFALRERIMKATKEAYKEQYGKEFSKEVPEAA EEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE TWYVPGDLSVWELKGAEVGALSTKDEDIRSLRELLTYGLKGIAAYTDHAYILQKFNDEIL EEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH HFLQEGLAATLDDSLTVNDYVALVMKAGEFAVKAMQLLDEANTSRYGNPEITEVYTGTLP HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCC GPAILVSGHDLLDLEEILKQTEGKGINVYTHGEMLPAHAYPELKKYKHLVGNYGTSWYNQ CCEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHH QKEFAQFNGAIVMTTNCIQKPLESYKDRIFTTGLVGWPGVKHIPNRTDGGQKDFTPVIEK HHHHHHHCCEEEEEHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCHHHHHH ALELGGLEEKPGKKIVIGFAHEQTAQVADKIIEAVKAGKIKRFVVMAGCDGRAKEREYYT HHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHH EMAKRLPKETVILTAGCAKYRYNMLDLGDIDGIPRVIDAGQCNDSYSLVVTALRLKEAFG HHHHHCCCCEEEEEECHHHHHCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCC LDDINDLPISYDIAWYEQKAVAVLLALLYLGVKGIRLGPVLPAFLSPNVLKVLVENFDIK CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHCCCCC PISTVEQDLELILQGK CHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA