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The map label for this gene is rpfG [H]

Identifier: 239617517

GI number: 239617517

Start: 1198793

End: 1200502

Strand: Reverse

Name: rpfG [H]

Synonym: Kole_1133

Alternate gene names: 239617517

Gene position: 1200502-1198793 (Counterclockwise)

Preceding gene: 239617518

Following gene: 239617515

Centisome position: 52.15

GC content: 38.6

Gene sequence:

>1710_bases
ATGCTTCTATTATTCGGATTAGCCAGCTTAAGGCTTGCGTACTATGAAAAAATCGCAAATGACTTCTCGAAAATTAACGC
AATGGTTTTGGAAGTTGGAAAACTTCATAATCTCTATCATGATAGTAAGGGACAAATACAAGAAGTTCCAGAGTACGCGG
AGACACTATCAAAACTATCCAAAGAATTAAGGGAACTTGAAAAATATTCTTCGCAAATCCCTATAACCTTTTCTTCCGAT
GAAATGCTTCCGCTGATAACAGACGAATATCAGTACCTACGGTTTGCCACGATTCTTAAAGATTTGCAGAGAAAAGTGGA
AAATTGGGTATACGACAGGGTCCGGTTTGTTAACAAATTAAAAAATGTAGCGTTGTATATCATAATTGCCAGTCTTGGGA
GCATGGTGGTTGTCTTACTATTTATCTGGAGAAGCTTTAAACACTATTTGGAATATGTTCAGCAGAGTATGGAAAATATA
GATTCCTTTCTTGAACATGAAAAATTAAAAACACAACTAAAATCAACGTTGAAGGAAACAGAAGGGGTCCGTGAAAGTAC
AGAAAAGATTATCAATGAGCTGAAGTTTGACAAAGAACTGTTGAATATTCCAACCGTTGGAACTCTGGAGGATATCGTTC
CCAACATATTTGAGACATTGAATAAATATGTGAATGTGGATCGGATAGCATTTGCTTTTTTAGATGAGTTAGGAAATGTC
ATCGCAGAAACGGCCGTGTCAAAAGCGGGTGAAATACGCCTTAGATCAGGTTTCGTCTATAGGCTTGATCACACAACACT
CAGCAAAATCATAGAAAACAGGCATCCACGTATAATTAACGATCTCCAACATTACTATGAAAATGTACATAAGTCCGAGG
TAACCAGACTTATTTTAGAAGAAGGCATGAGATCGAGCATAACCGTTCCTATATTTGTTAATCATAGGTGCATAGGCTTT
TTCTTCGTGAACAGTACAAAAGCGAACTTTTTTACAGAGGAAAATGCTTCCAGAATTGAACGTTTTGTAAGGATTATCAA
GGGTCTTATTTACAATTCTTACATAAACCAGGAGCTGATTGCGACAACCGCGAGAACCTTTGCTGATATCGTAGAAAAAA
AAGACCTCGAGACCGGCGAACATTTAACAAGGGTTTCGATGTATTCGTATTTAATTGCTTCCAGACTTGCAAAAGACGAC
GACAGACTCACGCCAAAGTTCATTCGCGAAGTACTATGGTTCAGTCCATTACACGACATCGGAAAAGTGGGGATCCCAGA
CAAAATACTTCTGAAACCTGGAAAACTCACCAAAGAAGAATTTGAAATCATGAAAACTCACGTAATTATAGGTGAAGGTG
TTTTGCAAAAGATGAGCAAAAATCTTATATCAAAAGTTGGCATTGACTTTATGAAAACTGCAAGGGATGTAATAATAGGG
CATCATGAAAAATGGGACGGAAGTGGTTATCCTTATGGGTTGAAGGGCGAACAGATTCCCCTTGCTGGGCGCATAGTAGC
AGTTGCTGATGTTTTTGACGCATTAACATCACGAAGGCCTTACAAACCGGCCTTCAAGTTTGAAACAGCGCTTAAAATGT
TGCGCCAGGATCGCGGAAAACGATTTGATCCTGTTGTTCTTGATGCGTTTTTTGATGTTCTGGATGAAGTAAAGCGTACA
TACGAACTGCACCAAGATAAAGACCGATAG

Upstream 100 bases:

>100_bases
TTAATAGAAAATAGGATGATGGCTGATGAAAAAAAGTGTGAGAACATACATAAACATTTTACTCTATGCTACCATTGTTT
CTTTCGGTGCAATTGGGGCT

Downstream 100 bases:

>100_bases
ACGCAAAAGCGTTACTTATTCTTTTTCTTCACTTCTTGATAGCGTCTTTGAGCTTCTTCTATTATCCTTTCAGCAGCTTC
TCTTCTTTCCCAACCTTCGG

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MLLLFGLASLRLAYYEKIANDFSKINAMVLEVGKLHNLYHDSKGQIQEVPEYAETLSKLSKELRELEKYSSQIPITFSSD
EMLPLITDEYQYLRFATILKDLQRKVENWVYDRVRFVNKLKNVALYIIIASLGSMVVVLLFIWRSFKHYLEYVQQSMENI
DSFLEHEKLKTQLKSTLKETEGVRESTEKIINELKFDKELLNIPTVGTLEDIVPNIFETLNKYVNVDRIAFAFLDELGNV
IAETAVSKAGEIRLRSGFVYRLDHTTLSKIIENRHPRIINDLQHYYENVHKSEVTRLILEEGMRSSITVPIFVNHRCIGF
FFVNSTKANFFTEENASRIERFVRIIKGLIYNSYINQELIATTARTFADIVEKKDLETGEHLTRVSMYSYLIASRLAKDD
DRLTPKFIREVLWFSPLHDIGKVGIPDKILLKPGKLTKEEFEIMKTHVIIGEGVLQKMSKNLISKVGIDFMKTARDVIIG
HHEKWDGSGYPYGLKGEQIPLAGRIVAVADVFDALTSRRPYKPAFKFETALKMLRQDRGKRFDPVVLDAFFDVLDEVKRT
YELHQDKDR

Sequences:

>Translated_569_residues
MLLLFGLASLRLAYYEKIANDFSKINAMVLEVGKLHNLYHDSKGQIQEVPEYAETLSKLSKELRELEKYSSQIPITFSSD
EMLPLITDEYQYLRFATILKDLQRKVENWVYDRVRFVNKLKNVALYIIIASLGSMVVVLLFIWRSFKHYLEYVQQSMENI
DSFLEHEKLKTQLKSTLKETEGVRESTEKIINELKFDKELLNIPTVGTLEDIVPNIFETLNKYVNVDRIAFAFLDELGNV
IAETAVSKAGEIRLRSGFVYRLDHTTLSKIIENRHPRIINDLQHYYENVHKSEVTRLILEEGMRSSITVPIFVNHRCIGF
FFVNSTKANFFTEENASRIERFVRIIKGLIYNSYINQELIATTARTFADIVEKKDLETGEHLTRVSMYSYLIASRLAKDD
DRLTPKFIREVLWFSPLHDIGKVGIPDKILLKPGKLTKEEFEIMKTHVIIGEGVLQKMSKNLISKVGIDFMKTARDVIIG
HHEKWDGSGYPYGLKGEQIPLAGRIVAVADVFDALTSRRPYKPAFKFETALKMLRQDRGKRFDPVVLDAFFDVLDEVKRT
YELHQDKDR
>Mature_569_residues
MLLLFGLASLRLAYYEKIANDFSKINAMVLEVGKLHNLYHDSKGQIQEVPEYAETLSKLSKELRELEKYSSQIPITFSSD
EMLPLITDEYQYLRFATILKDLQRKVENWVYDRVRFVNKLKNVALYIIIASLGSMVVVLLFIWRSFKHYLEYVQQSMENI
DSFLEHEKLKTQLKSTLKETEGVRESTEKIINELKFDKELLNIPTVGTLEDIVPNIFETLNKYVNVDRIAFAFLDELGNV
IAETAVSKAGEIRLRSGFVYRLDHTTLSKIIENRHPRIINDLQHYYENVHKSEVTRLILEEGMRSSITVPIFVNHRCIGF
FFVNSTKANFFTEENASRIERFVRIIKGLIYNSYINQELIATTARTFADIVEKKDLETGEHLTRVSMYSYLIASRLAKDD
DRLTPKFIREVLWFSPLHDIGKVGIPDKILLKPGKLTKEEFEIMKTHVIIGEGVLQKMSKNLISKVGIDFMKTARDVIIG
HHEKWDGSGYPYGLKGEQIPLAGRIVAVADVFDALTSRRPYKPAFKFETALKMLRQDRGKRFDPVVLDAFFDVLDEVKRT
YELHQDKDR

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG3437

COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 65988; Mature: 65988

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLLLFGLASLRLAYYEKIANDFSKINAMVLEVGKLHNLYHDSKGQIQEVPEYAETLSKLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KELRELEKYSSQIPITFSSDEMLPLITDEYQYLRFATILKDLQRKVENWVYDRVRFVNKL
HHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNVALYIIIASLGSMVVVLLFIWRSFKHYLEYVQQSMENIDSFLEHEKLKTQLKSTLKET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGVRESTEKIINELKFDKELLNIPTVGTLEDIVPNIFETLNKYVNVDRIAFAFLDELGNV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
IAETAVSKAGEIRLRSGFVYRLDHTTLSKIIENRHPRIINDLQHYYENVHKSEVTRLILE
HHHHHHHCCCCEEEECCCEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EGMRSSITVPIFVNHRCIGFFFVNSTKANFFTEENASRIERFVRIIKGLIYNSYINQELI
HCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ATTARTFADIVEKKDLETGEHLTRVSMYSYLIASRLAKDDDRLTPKFIREVLWFSPLHDI
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHH
GKVGIPDKILLKPGKLTKEEFEIMKTHVIIGEGVLQKMSKNLISKVGIDFMKTARDVIIG
CCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC
HHEKWDGSGYPYGLKGEQIPLAGRIVAVADVFDALTSRRPYKPAFKFETALKMLRQDRGK
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
RFDPVVLDAFFDVLDEVKRTYELHQDKDR
CCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]