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The map label for this gene is 239617463

Identifier: 239617463

GI number: 239617463

Start: 1147903

End: 1148640

Strand: Direct

Name: 239617463

Synonym: Kole_1078

Alternate gene names: NA

Gene position: 1147903-1148640 (Clockwise)

Preceding gene: 239617462

Following gene: 239617467

Centisome position: 49.86

GC content: 40.38

Gene sequence:

>738_bases
ATGATAAAAGAAATTTGCGCCAAAAAAGCTGTTACCAGGACGAAGATTCCGGTTGCGAGATACACAGTAAATCCGTATAT
TGGCTGTACTTTTGGCTGTAGGTATTGTTTCGCCAGGTTTATAGGTGCTTTCAAGTACACCTCTGGGACTTGGGGAAAAG
ACATATTGGTAAGAAAGAACATTCCGGAACTTCTTCGAAAAGAAATTAACAAGCTCTCCCCAGGAAAATTTTTTCTCTCA
ACTTCTTGCGATCCATATCAGCATATTGAAAAGAAATACGAGATCACGAGAACCGTGATAAGGATACTTTTATCCCACTG
GATGCCTATTTTTATCATGACGAAGTCTTCCCTCATACGAAGGGATATAGATCTTCTGATGTTGGAGGTAGATTTAGAGG
TTAATATTACCATCACTACTGACAGAGAAGATGTGAGAAAACTTCTGGAACCGGGTGCTCCCTCGATTCAGGAGAGACTT
GAAACCATAAAATTTCTCAAAGAAAAAGGTATCAAAGTAGGTGCCTTTGTTGGGCCTGTGCTTCCCATGAATCCAGAAAA
ACTCGCGCTAAAGCTTTCAAGGCTGATTGAAAGGGTGCATCTAGATCCACTCAATTATCCCGGTCAGGTGAAAAATATCT
ATATCAAAAACGGCTGGAATAAATGGCTACATAAGGACTCCTTTTATGAAGTCAGGGAAGTCTTTGAAAAAATCTTTGGC
AGTGAGAATGTGGGGTGA

Upstream 100 bases:

>100_bases
AACAGTAAAAAAACGGTTTCTGAACATGGATACAGATAAAAAACCCGGAAACCGAAGATAGCGTCACCACATAATGTGTT
CCAGGATGTAGAATTAGAAC

Downstream 100 bases:

>100_bases
AGCTGGGAGCAGCTCCGTGGCAACAAAAAACGTTGTCGGTTGCAAATAATAACCGAGATCCGAGAACCGAGAGCCCGAGA
AAGTCGGTGCGTGATTCAAA

Product: Radical SAM domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MIKEICAKKAVTRTKIPVARYTVNPYIGCTFGCRYCFARFIGAFKYTSGTWGKDILVRKNIPELLRKEINKLSPGKFFLS
TSCDPYQHIEKKYEITRTVIRILLSHWMPIFIMTKSSLIRRDIDLLMLEVDLEVNITITTDREDVRKLLEPGAPSIQERL
ETIKFLKEKGIKVGAFVGPVLPMNPEKLALKLSRLIERVHLDPLNYPGQVKNIYIKNGWNKWLHKDSFYEVREVFEKIFG
SENVG

Sequences:

>Translated_245_residues
MIKEICAKKAVTRTKIPVARYTVNPYIGCTFGCRYCFARFIGAFKYTSGTWGKDILVRKNIPELLRKEINKLSPGKFFLS
TSCDPYQHIEKKYEITRTVIRILLSHWMPIFIMTKSSLIRRDIDLLMLEVDLEVNITITTDREDVRKLLEPGAPSIQERL
ETIKFLKEKGIKVGAFVGPVLPMNPEKLALKLSRLIERVHLDPLNYPGQVKNIYIKNGWNKWLHKDSFYEVREVFEKIFG
SENVG
>Mature_245_residues
MIKEICAKKAVTRTKIPVARYTVNPYIGCTFGCRYCFARFIGAFKYTSGTWGKDILVRKNIPELLRKEINKLSPGKFFLS
TSCDPYQHIEKKYEITRTVIRILLSHWMPIFIMTKSSLIRRDIDLLMLEVDLEVNITITTDREDVRKLLEPGAPSIQERL
ETIKFLKEKGIKVGAFVGPVLPMNPEKLALKLSRLIERVHLDPLNYPGQVKNIYIKNGWNKWLHKDSFYEVREVFEKIFG
SENVG

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 28441; Mature: 28441

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKEICAKKAVTRTKIPVARYTVNPYIGCTFGCRYCFARFIGAFKYTSGTWGKDILVRKN
CCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC
IPELLRKEINKLSPGKFFLSTSCDPYQHIEKKYEITRTVIRILLSHWMPIFIMTKSSLIR
CHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHH
RDIDLLMLEVDLEVNITITTDREDVRKLLEPGAPSIQERLETIKFLKEKGIKVGAFVGPV
HHHHEEEEEEEEEEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEHHHCCC
LPMNPEKLALKLSRLIERVHLDPLNYPGQVKNIYIKNGWNKWLHKDSFYEVREVFEKIFG
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHCCCHHHHHHHHHHHHHC
SENVG
CCCCC
>Mature Secondary Structure
MIKEICAKKAVTRTKIPVARYTVNPYIGCTFGCRYCFARFIGAFKYTSGTWGKDILVRKN
CCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECC
IPELLRKEINKLSPGKFFLSTSCDPYQHIEKKYEITRTVIRILLSHWMPIFIMTKSSLIR
CHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHH
RDIDLLMLEVDLEVNITITTDREDVRKLLEPGAPSIQERLETIKFLKEKGIKVGAFVGPV
HHHHEEEEEEEEEEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEHHHCCC
LPMNPEKLALKLSRLIERVHLDPLNYPGQVKNIYIKNGWNKWLHKDSFYEVREVFEKIFG
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHCCCHHHHHHHHHHHHHC
SENVG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]