| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617446
Identifier: 239617446
GI number: 239617446
Start: 1128855
End: 1130045
Strand: Reverse
Name: 239617446
Synonym: Kole_1061
Alternate gene names: NA
Gene position: 1130045-1128855 (Counterclockwise)
Preceding gene: 239617447
Following gene: 239617442
Centisome position: 49.09
GC content: 42.49
Gene sequence:
>1191_bases ATGAAAATAGCGACGATAGGTGGGCTGGTTGTTATTTGTTTTATCATATCTTCATGCGCACTGATTCATCTTTTTGATGA GACTAACGTGCGATTATTGTGGAAATACAAATTTGAGCCAGGAATAATTTCGGCGGTGCAGCCAAGGTATTTTGCATATG ATAAGGAAGAGGAAATACTCTACACGAGAGGAGACGATGAGCTGGTTGCAGCGATAGATTTGAATCGAAAAGAAGTGGTG TGGGATAAACGCATTCGGACATTTCTTAACCTGGGAGCCGATATAGAAATATGTGGAGACAAGGTATATATAATCCGAAT GGAAACGGAAGAATCAAGCTCGGCGGTGATGGCGCTTGACAAATGGACAGGGGAGGTAGAGTGGGAATATAGACTTCAGG GTAAAAGGCCTGAAACTGGGTTGGCTCAAGGTGAAGGATATTTATACGTCCTCGACCATGTTGGTTATAGAGAAGGAGCT TTGATAAAGCTTGATAAAGATACAGGAGAAAAGATATGGGAGACGAAGGGGTTAAAAGCTTTCATATACACAGAACCGGT GATAGATGAAGAGAGAGGGTTGATATACGTGACAAGCAGAGATTACGATGACGACGATTACAATCCCACATTTTATGCTA TAGACAAGGAGACTGGAAAAGTAGTATGGAAGTATGAGATAGAGAGCAAACACAGAGATGATTTTGCAACCGTCCCGGTG ATATACGGAGATAGCGTATATGCAGCGACATGGTTTGGACTTGTGGTGAGGTTGAAAAGAGATACCGGTGAAGTAGTGTG GAAGAGACGTTATTTTCCCGATGACAGCAGTGTTCATCCAGTGAACTGGGGATTTGGGAATAGATTGCAAATATATGATG ACAAGTTGATATTGATGAGGCCAGCAGGGTATATATATGCGTTGAACACAGAGAATGGGGATGTGGTATGGAAGGCGTGG ACAAGGTACTCAGCCGATGATGTTTATCTGGACAAAGAAAGCGGAAGAATATACGTACATAATTGGGGCCCTGAGATAAG GTGTTATTCAGCAGAAGATGGAAAATTAATCTGGATGTATGAATACGAAGGCGGAGAAGGAAGGGTAGGAGGAGCACCGT ACAAGGTGGGAAAATATATCTTCGATGGAGATACAGGTGGTAATTTTTACATTCTTGAGGAGTTGAGGTGA
Upstream 100 bases:
>100_bases AAGGTTAGTGAAAGGCTAATAGAAATACTCAACATAATATTGGAATTGGAAGATGGACAGTGAAAAACGAAGGTGTTTGT CATTCTGTGGAGGGGATACG
Downstream 100 bases:
>100_bases CTGGGTAGTACCAATTGCATCACAGATATTTCCAGAGGATGTTGTATCTACATCGATCATAAAATATAGAAAACGTCAAT CAAAAATACAATGCAAATCT
Product: Pyrrolo-quinoline quinone
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MKIATIGGLVVICFIISSCALIHLFDETNVRLLWKYKFEPGIISAVQPRYFAYDKEEEILYTRGDDELVAAIDLNRKEVV WDKRIRTFLNLGADIEICGDKVYIIRMETEESSSAVMALDKWTGEVEWEYRLQGKRPETGLAQGEGYLYVLDHVGYREGA LIKLDKDTGEKIWETKGLKAFIYTEPVIDEERGLIYVTSRDYDDDDYNPTFYAIDKETGKVVWKYEIESKHRDDFATVPV IYGDSVYAATWFGLVVRLKRDTGEVVWKRRYFPDDSSVHPVNWGFGNRLQIYDDKLILMRPAGYIYALNTENGDVVWKAW TRYSADDVYLDKESGRIYVHNWGPEIRCYSAEDGKLIWMYEYEGGEGRVGGAPYKVGKYIFDGDTGGNFYILEELR
Sequences:
>Translated_396_residues MKIATIGGLVVICFIISSCALIHLFDETNVRLLWKYKFEPGIISAVQPRYFAYDKEEEILYTRGDDELVAAIDLNRKEVV WDKRIRTFLNLGADIEICGDKVYIIRMETEESSSAVMALDKWTGEVEWEYRLQGKRPETGLAQGEGYLYVLDHVGYREGA LIKLDKDTGEKIWETKGLKAFIYTEPVIDEERGLIYVTSRDYDDDDYNPTFYAIDKETGKVVWKYEIESKHRDDFATVPV IYGDSVYAATWFGLVVRLKRDTGEVVWKRRYFPDDSSVHPVNWGFGNRLQIYDDKLILMRPAGYIYALNTENGDVVWKAW TRYSADDVYLDKESGRIYVHNWGPEIRCYSAEDGKLIWMYEYEGGEGRVGGAPYKVGKYIFDGDTGGNFYILEELR >Mature_396_residues MKIATIGGLVVICFIISSCALIHLFDETNVRLLWKYKFEPGIISAVQPRYFAYDKEEEILYTRGDDELVAAIDLNRKEVV WDKRIRTFLNLGADIEICGDKVYIIRMETEESSSAVMALDKWTGEVEWEYRLQGKRPETGLAQGEGYLYVLDHVGYREGA LIKLDKDTGEKIWETKGLKAFIYTEPVIDEERGLIYVTSRDYDDDDYNPTFYAIDKETGKVVWKYEIESKHRDDFATVPV IYGDSVYAATWFGLVVRLKRDTGEVVWKRRYFPDDSSVHPVNWGFGNRLQIYDDKLILMRPAGYIYALNTENGDVVWKAW TRYSADDVYLDKESGRIYVHNWGPEIRCYSAEDGKLIWMYEYEGGEGRVGGAPYKVGKYIFDGDTGGNFYILEELR
Specific function: Unknown
COG id: COG1520
COG function: function code S; FOG: WD40-like repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45857; Mature: 45857
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIATIGGLVVICFIISSCALIHLFDETNVRLLWKYKFEPGIISAVQPRYFAYDKEEEIL CEEEEHHHHHHHHHHHHCCEEEEEECCCCEEEEEEEECCCCCEEECCCCEEECCCCCCEE YTRGDDELVAAIDLNRKEVVWDKRIRTFLNLGADIEICGDKVYIIRMETEESSSAVMALD EECCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCEEEEEEEECCCCCCEEEEEE KWTGEVEWEYRLQGKRPETGLAQGEGYLYVLDHVGYREGALIKLDKDTGEKIWETKGLKA CCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCHHHHCCCCEE FIYTEPVIDEERGLIYVTSRDYDDDDYNPTFYAIDKETGKVVWKYEIESKHRDDFATVPV EEEECCCEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEE IYGDSVYAATWFGLVVRLKRDTGEVVWKRRYFPDDSSVHPVNWGFGNRLQIYDDKLILMR EECCCCHHHEEEEEEEEEECCCCCEEEEEECCCCCCCCCEEECCCCCEEEEECCEEEEEC PAGYIYALNTENGDVVWKAWTRYSADDVYLDKESGRIYVHNWGPEIRCYSAEDGKLIWMY CCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCEEEEECCCCCEEEEECCCCCEEEEE EYEGGEGRVGGAPYKVGKYIFDGDTGGNFYILEELR EEECCCCCCCCCCEEECEEEEECCCCCCEEEEEECC >Mature Secondary Structure MKIATIGGLVVICFIISSCALIHLFDETNVRLLWKYKFEPGIISAVQPRYFAYDKEEEIL CEEEEHHHHHHHHHHHHCCEEEEEECCCCEEEEEEEECCCCCEEECCCCEEECCCCCCEE YTRGDDELVAAIDLNRKEVVWDKRIRTFLNLGADIEICGDKVYIIRMETEESSSAVMALD EECCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCEEEEEEEECCCCCCEEEEEE KWTGEVEWEYRLQGKRPETGLAQGEGYLYVLDHVGYREGALIKLDKDTGEKIWETKGLKA CCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCHHHHCCCCEE FIYTEPVIDEERGLIYVTSRDYDDDDYNPTFYAIDKETGKVVWKYEIESKHRDDFATVPV EEEECCCEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEE IYGDSVYAATWFGLVVRLKRDTGEVVWKRRYFPDDSSVHPVNWGFGNRLQIYDDKLILMR EECCCCHHHEEEEEEEEEECCCCCEEEEEECCCCCCCCCEEECCCCCEEEEECCEEEEEC PAGYIYALNTENGDVVWKAWTRYSADDVYLDKESGRIYVHNWGPEIRCYSAEDGKLIWMY CCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCEEEEECCCCCEEEEECCCCCEEEEE EYEGGEGRVGGAPYKVGKYIFDGDTGGNFYILEELR EEECCCCCCCCCCEEECEEEEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA