| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is 239617443
Identifier: 239617443
GI number: 239617443
Start: 1126064
End: 1127725
Strand: Direct
Name: 239617443
Synonym: Kole_1058
Alternate gene names: NA
Gene position: 1126064-1127725 (Clockwise)
Preceding gene: 239617433
Following gene: 239617444
Centisome position: 48.91
GC content: 40.01
Gene sequence:
>1662_bases TTGGAGAGAGAAAAACTGAGAAGTAAGATAAAAGCCCTTTTACAGGTACTAGATAACAATGGCAGTTTTGCAAAACCTTT CTTGAATTATTATGAAAGCGCCGGTTTACCTTCTGGATGGAGAAGCTACATTCAGGCCATTAAACTCGCATGGAACAGAA AGTACTTCAAAGCCCTGAAGATTCTAGAAACAACTCTAGTAATTACCAGAAAAAACGGAATTCTTTACTATCTAATACTC AGTAAGAAAATGAGCATTTTGCATTTTTTGGGGCGAGAAGAGGCTACCGCTGTCTATAACAAGCTTCGTGAAGAGTTTTC AAGAATTCCTCCATTTTTGCGTTCAGCAGTGGCATCAAATTTACTAAACGTTTATGCAAGAACTGCTGATAACCCCAAAA TGAAGAAGTTTAGGTTCTGGAGCGATTCTTATAAGAAAGATCAAAGTGGTTGGTGTTTTTTTCTTCTGGGAAAAGCCAGA GATTTTACCAAAAAAGGAGATGTCGTAAAGGCAAAAAGGCTTTTCCAAGAATGTATTGAAGAATCCCTTAAAGCTGATCA CCCGATTGCAATTGCAACTGCTTATAACGATGCTGCCTGGCATTTAAGATCAACATATCCCGAAGATTCTATAAATTATG CCCGAAAAGCTGCCTACTTAAATGGAAAATATAGGGAAAGCCCGGCTTCAGCACTTCCGAGTATCGATACACTAATCGAG GTAGAAAAGGACTTTGTGAGTAAAGAAGTAGTGAACCTTGAGATTTTTGCCGGATGTATGGAATGCGTACCAAAAGAAAT GGAGAACCATATAAGGAAAAGATATGCTCATAGAATGATACTATTACCAAAAATCCTCACCGATTTAGAAAAATCCTTAT ATGAAAACGATATGGAACTGAGAGAGTGGTTGAGTAAAAATATAAAGTCTATAAAGCAGACATCCTTACTTTCTGGAGTT GCAAGGGACAACCTCAGCAAACTCATTAACGGCAAAACCCAAACCGTCAGGGGTGAAACTTTAAGGAAGATAATCACCGG ATTGAAAATCGAGGTTGATCCACTCAACGATCCTTATCCGGTCGTGAACGAATGGATAAAACTTCAGATAGATAAAGGCT TTGAAAATGCGATAACAGAACTGGAAAAACTCAAACCATCCGAACATGAAATATTAATCCCCTCAACATACACCGCTCTT TTAAACAGAAGGAAAGATCATCCTTACCTGAGCAGGAAGGGAACGCTTTCCCGCGCACTGGAACTTTGCAAAGGAGATCT TCAAAAGTTCAAAGAATTTACGGAAAATCGTTATGAAACAAAGAAATTCGTGGCTCAACTCTTCGAGCTTCATCCGTTCC TCGAAGGCAGGAGAGACCTTGTCAGGAAATTCCTGAAGGCCTTGCCTGCGAGAAAAAGAAAAGAGTTCATCCATAAGTAT CTTCAACTCGGAGATGAAGACAGAGAGGTAATAGATACCTTCATGAGAAACTACGTTCGCTACGACAGGAACTGGGGGCT AAGGGTCAAACCTCCTGCAGAACTTTATCCCTTCACCCAGAAATACAGACTAAAGAAAACCCAGACCGCCCTCGCTTACT GGGCGCTGGATAAGAAGAAGGAAAGGAAAAAGCTGGCTAATAGACTGTTGAAGTTTGTTTGA
Upstream 100 bases:
>100_bases TTTATAGGTGTTGCAACCCAGCTCTATAAAAGTGTTTTGGGAGATAAAATATGGTGCATATTGGCTTTTCACGGAATTCA TGGTGTAACACTTCATATGA
Downstream 100 bases:
>100_bases GGTGTTTTTTATGCTTTACGGTGTCTTCGGTGTTTAACTAGCGGATAGTAGGCTACCGTACAGTAGGTTGTTTTCGAAAA GATAATAATATCGGAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MEREKLRSKIKALLQVLDNNGSFAKPFLNYYESAGLPSGWRSYIQAIKLAWNRKYFKALKILETTLVITRKNGILYYLIL SKKMSILHFLGREEATAVYNKLREEFSRIPPFLRSAVASNLLNVYARTADNPKMKKFRFWSDSYKKDQSGWCFFLLGKAR DFTKKGDVVKAKRLFQECIEESLKADHPIAIATAYNDAAWHLRSTYPEDSINYARKAAYLNGKYRESPASALPSIDTLIE VEKDFVSKEVVNLEIFAGCMECVPKEMENHIRKRYAHRMILLPKILTDLEKSLYENDMELREWLSKNIKSIKQTSLLSGV ARDNLSKLINGKTQTVRGETLRKIITGLKIEVDPLNDPYPVVNEWIKLQIDKGFENAITELEKLKPSEHEILIPSTYTAL LNRRKDHPYLSRKGTLSRALELCKGDLQKFKEFTENRYETKKFVAQLFELHPFLEGRRDLVRKFLKALPARKRKEFIHKY LQLGDEDREVIDTFMRNYVRYDRNWGLRVKPPAELYPFTQKYRLKKTQTALAYWALDKKKERKKLANRLLKFV
Sequences:
>Translated_553_residues MEREKLRSKIKALLQVLDNNGSFAKPFLNYYESAGLPSGWRSYIQAIKLAWNRKYFKALKILETTLVITRKNGILYYLIL SKKMSILHFLGREEATAVYNKLREEFSRIPPFLRSAVASNLLNVYARTADNPKMKKFRFWSDSYKKDQSGWCFFLLGKAR DFTKKGDVVKAKRLFQECIEESLKADHPIAIATAYNDAAWHLRSTYPEDSINYARKAAYLNGKYRESPASALPSIDTLIE VEKDFVSKEVVNLEIFAGCMECVPKEMENHIRKRYAHRMILLPKILTDLEKSLYENDMELREWLSKNIKSIKQTSLLSGV ARDNLSKLINGKTQTVRGETLRKIITGLKIEVDPLNDPYPVVNEWIKLQIDKGFENAITELEKLKPSEHEILIPSTYTAL LNRRKDHPYLSRKGTLSRALELCKGDLQKFKEFTENRYETKKFVAQLFELHPFLEGRRDLVRKFLKALPARKRKEFIHKY LQLGDEDREVIDTFMRNYVRYDRNWGLRVKPPAELYPFTQKYRLKKTQTALAYWALDKKKERKKLANRLLKFV >Mature_553_residues MEREKLRSKIKALLQVLDNNGSFAKPFLNYYESAGLPSGWRSYIQAIKLAWNRKYFKALKILETTLVITRKNGILYYLIL SKKMSILHFLGREEATAVYNKLREEFSRIPPFLRSAVASNLLNVYARTADNPKMKKFRFWSDSYKKDQSGWCFFLLGKAR DFTKKGDVVKAKRLFQECIEESLKADHPIAIATAYNDAAWHLRSTYPEDSINYARKAAYLNGKYRESPASALPSIDTLIE VEKDFVSKEVVNLEIFAGCMECVPKEMENHIRKRYAHRMILLPKILTDLEKSLYENDMELREWLSKNIKSIKQTSLLSGV ARDNLSKLINGKTQTVRGETLRKIITGLKIEVDPLNDPYPVVNEWIKLQIDKGFENAITELEKLKPSEHEILIPSTYTAL LNRRKDHPYLSRKGTLSRALELCKGDLQKFKEFTENRYETKKFVAQLFELHPFLEGRRDLVRKFLKALPARKRKEFIHKY LQLGDEDREVIDTFMRNYVRYDRNWGLRVKPPAELYPFTQKYRLKKTQTALAYWALDKKKERKKLANRLLKFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64855; Mature: 64855
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEREKLRSKIKALLQVLDNNGSFAKPFLNYYESAGLPSGWRSYIQAIKLAWNRKYFKALK CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH ILETTLVITRKNGILYYLILSKKMSILHFLGREEATAVYNKLREEFSRIPPFLRSAVASN HHHHHHEEEECCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH LLNVYARTADNPKMKKFRFWSDSYKKDQSGWCFFLLGKARDFTKKGDVVKAKRLFQECIE HHHHHHHCCCCCCCHHEEECCHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH ESLKADHPIAIATAYNDAAWHLRSTYPEDSINYARKAAYLNGKYRESPASALPSIDTLIE HHHCCCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHH VEKDFVSKEVVNLEIFAGCMECVPKEMENHIRKRYAHRMILLPKILTDLEKSLYENDMEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH REWLSKNIKSIKQTSLLSGVARDNLSKLINGKTQTVRGETLRKIITGLKIEVDPLNDPYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCH VVNEWIKLQIDKGFENAITELEKLKPSEHEILIPSTYTALLNRRKDHPYLSRKGTLSRAL HHHHHHEEEECCCHHHHHHHHHHCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCHHHHHH ELCKGDLQKFKEFTENRYETKKFVAQLFELHPFLEGRRDLVRKFLKALPARKRKEFIHKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHH LQLGDEDREVIDTFMRNYVRYDRNWGLRVKPPAELYPFTQKYRLKKTQTALAYWALDKKK HHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH ERKKLANRLLKFV HHHHHHHHHHHCC >Mature Secondary Structure MEREKLRSKIKALLQVLDNNGSFAKPFLNYYESAGLPSGWRSYIQAIKLAWNRKYFKALK CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH ILETTLVITRKNGILYYLILSKKMSILHFLGREEATAVYNKLREEFSRIPPFLRSAVASN HHHHHHEEEECCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH LLNVYARTADNPKMKKFRFWSDSYKKDQSGWCFFLLGKARDFTKKGDVVKAKRLFQECIE HHHHHHHCCCCCCCHHEEECCHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHH ESLKADHPIAIATAYNDAAWHLRSTYPEDSINYARKAAYLNGKYRESPASALPSIDTLIE HHHCCCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHH VEKDFVSKEVVNLEIFAGCMECVPKEMENHIRKRYAHRMILLPKILTDLEKSLYENDMEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH REWLSKNIKSIKQTSLLSGVARDNLSKLINGKTQTVRGETLRKIITGLKIEVDPLNDPYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCH VVNEWIKLQIDKGFENAITELEKLKPSEHEILIPSTYTALLNRRKDHPYLSRKGTLSRAL HHHHHHEEEECCCHHHHHHHHHHCCCCCCCEECCHHHHHHHHCCCCCCCCCCCCHHHHHH ELCKGDLQKFKEFTENRYETKKFVAQLFELHPFLEGRRDLVRKFLKALPARKRKEFIHKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHH LQLGDEDREVIDTFMRNYVRYDRNWGLRVKPPAELYPFTQKYRLKKTQTALAYWALDKKK HHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH ERKKLANRLLKFV HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA