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The map label for this gene is rpfG [H]

Identifier: 239617413

GI number: 239617413

Start: 1086758

End: 1088209

Strand: Reverse

Name: rpfG [H]

Synonym: Kole_1024

Alternate gene names: 239617413

Gene position: 1088209-1086758 (Counterclockwise)

Preceding gene: 239617414

Following gene: 239617411

Centisome position: 47.27

GC content: 38.02

Gene sequence:

>1452_bases
ATGGAGAAAAGCATTGGTGATTTGAAGAAGTATTCAAAACGCGCAGTTGCTGCTGTTTGGATCAATTATATTGTGTGGAC
GGTTATCGCGATTGTTTTAATTTCTTCTATATACACAAAAAGTGTCCGAGATAGAGCTACCATGGCAAAAGAAAACTTCG
AGTCAATTCTGCAAATGATCTCTGTAAATCCTGAGCTTCCGGGTGTTTTTATCGAACCGGTTGAAGATGGAACAGTGAGG
GGAATCGAATTAGAACGCCTGATAGGGGATCAAAACTTTTCAATAGGAGAAGGCATTCTATGTGAGGAAACCAGCTTCAA
GTTTCTGAAAAAAGAGAACGATAAGGGATATTTGGTCGAGGTACCCATAAAATTCATAGAGAAATTTTTCAATGTTCCAA
AAATTATTTGGTACATAGCGGACGAAAATGGAAAAATACTATATTCTTCAACGCCATTGGTGTTGAGTGAATCTAGCAAA
GATGTTTTGAAGGGGTCAGATCATTTTTATCAGTTCACAACATTCAATATTTTGGGTTCGGATTATGTTCTAGGAATCGG
AGAACAATGGATAAATTCCCTTATGTTCCTTCTTGTTTCATTAGGTATTATAATTTTCATATCATACCTTCCTTTAGCTC
TTACAATTAGTAAAATCGCTGCAGAAACAAATGAAATCCAAAATGACCAAAAAGAGCTTTCCAAAGTACTCGAAAATCGA
GACAGAAAGGTAATCGTACATTATAAGGAACACATAAAATTACTTACAGCAATCAAGTCCTGTTCTTCCGAACGGAAAAA
GCTACTCAACGAGCTAGGTAAGTTAAGAGAGGGACTGGAAAAGTGTAAGAAAAAAATCGAATTGGAACGCGAAATTGCTA
GAGCACATTTCAAAAAGCTCCTTACGGCACTCGGACAAGAGATCGAAGAACGTTCTCACAGCGTGACACCTGATATTAAA
ACGATGGTGGAAGTAGCACTTTTGACAGCTCAGGAATTAGGGGTACAAGATGAAGAAGAGCTTGAAGCTATAGAGTTTGG
CGTTATTCTCCATGATATCGGGATGATAGAAATTCCTGAAAGCATTCTCCACAAACCGGGGATCCTAACGGAAAATGAAA
GGGCAATTGTTGAAAAACATCCGTTAATCGGAGCAAGATTAGTTTCTCAACTCTCGCTATCACCACTTCTGGAAGATATC
ATAAAGCACCATCATGAACGCTACAATGGCCAGGGATACCCGGATGGTCTATCCGGTGATCATATATCAACAAGAGCCAA
GGTTGTCAATCTGGTTGATACATATTTCGCCATTATCTCAAAAAGATTCCACAGAGCACAATACCCCAAAAAAGAAGCAT
TGAGGATCATTGAAAGTGAGAAAGGAAAATCTTTTGATCCAAAAGTTGTTGAAGTTTTTAAGCGAGTGATATCAAAATCA
ATAGAATCTTAG

Upstream 100 bases:

>100_bases
ATAAACTTTTCTTTTGAGGGGATAGATGGCCCGGTTACGATTACCGAAAATTATTACGCAACAAAGGAATGCAGCATAAT
AACATTGGAGGAAGTTTTCA

Downstream 100 bases:

>100_bases
ATAGCATAAATTTTATTTTTCCCGGCTTTTTTCGCAGCGTACAAAGCCCTATCAGCTTTTTCAACCAGATCAGAAGCACT
TTCACCGTCGAAAGGATATG

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MEKSIGDLKKYSKRAVAAVWINYIVWTVIAIVLISSIYTKSVRDRATMAKENFESILQMISVNPELPGVFIEPVEDGTVR
GIELERLIGDQNFSIGEGILCEETSFKFLKKENDKGYLVEVPIKFIEKFFNVPKIIWYIADENGKILYSSTPLVLSESSK
DVLKGSDHFYQFTTFNILGSDYVLGIGEQWINSLMFLLVSLGIIIFISYLPLALTISKIAAETNEIQNDQKELSKVLENR
DRKVIVHYKEHIKLLTAIKSCSSERKKLLNELGKLREGLEKCKKKIELEREIARAHFKKLLTALGQEIEERSHSVTPDIK
TMVEVALLTAQELGVQDEEELEAIEFGVILHDIGMIEIPESILHKPGILTENERAIVEKHPLIGARLVSQLSLSPLLEDI
IKHHHERYNGQGYPDGLSGDHISTRAKVVNLVDTYFAIISKRFHRAQYPKKEALRIIESEKGKSFDPKVVEVFKRVISKS
IES

Sequences:

>Translated_483_residues
MEKSIGDLKKYSKRAVAAVWINYIVWTVIAIVLISSIYTKSVRDRATMAKENFESILQMISVNPELPGVFIEPVEDGTVR
GIELERLIGDQNFSIGEGILCEETSFKFLKKENDKGYLVEVPIKFIEKFFNVPKIIWYIADENGKILYSSTPLVLSESSK
DVLKGSDHFYQFTTFNILGSDYVLGIGEQWINSLMFLLVSLGIIIFISYLPLALTISKIAAETNEIQNDQKELSKVLENR
DRKVIVHYKEHIKLLTAIKSCSSERKKLLNELGKLREGLEKCKKKIELEREIARAHFKKLLTALGQEIEERSHSVTPDIK
TMVEVALLTAQELGVQDEEELEAIEFGVILHDIGMIEIPESILHKPGILTENERAIVEKHPLIGARLVSQLSLSPLLEDI
IKHHHERYNGQGYPDGLSGDHISTRAKVVNLVDTYFAIISKRFHRAQYPKKEALRIIESEKGKSFDPKVVEVFKRVISKS
IES
>Mature_483_residues
MEKSIGDLKKYSKRAVAAVWINYIVWTVIAIVLISSIYTKSVRDRATMAKENFESILQMISVNPELPGVFIEPVEDGTVR
GIELERLIGDQNFSIGEGILCEETSFKFLKKENDKGYLVEVPIKFIEKFFNVPKIIWYIADENGKILYSSTPLVLSESSK
DVLKGSDHFYQFTTFNILGSDYVLGIGEQWINSLMFLLVSLGIIIFISYLPLALTISKIAAETNEIQNDQKELSKVLENR
DRKVIVHYKEHIKLLTAIKSCSSERKKLLNELGKLREGLEKCKKKIELEREIARAHFKKLLTALGQEIEERSHSVTPDIK
TMVEVALLTAQELGVQDEEELEAIEFGVILHDIGMIEIPESILHKPGILTENERAIVEKHPLIGARLVSQLSLSPLLEDI
IKHHHERYNGQGYPDGLSGDHISTRAKVVNLVDTYFAIISKRFHRAQYPKKEALRIIESEKGKSFDPKVVEVFKRVISKS
IES

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 54876; Mature: 54876

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKSIGDLKKYSKRAVAAVWINYIVWTVIAIVLISSIYTKSVRDRATMAKENFESILQMI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVNPELPGVFIEPVEDGTVRGIELERLIGDQNFSIGEGILCEETSFKFLKKENDKGYLVE
HCCCCCCCEEEECCCCCCCCCEEHHHHHCCCCCCCCCCEEECCCHHHHHHCCCCCCEEEE
VPIKFIEKFFNVPKIIWYIADENGKILYSSTPLVLSESSKDVLKGSDHFYQFTTFNILGS
ECHHHHHHHHCCCEEEEEEECCCCEEEEECCCEEEECCCHHHHCCCCCEEEEEEEEECCC
DYVLGIGEQWINSLMFLLVSLGIIIFISYLPLALTISKIAAETNEIQNDQKELSKVLENR
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
DRKVIVHYKEHIKLLTAIKSCSSERKKLLNELGKLREGLEKCKKKIELEREIARAHFKKL
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTALGQEIEERSHSVTPDIKTMVEVALLTAQELGVQDEEELEAIEFGVILHDIGMIEIPE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCH
SILHKPGILTENERAIVEKHPLIGARLVSQLSLSPLLEDIIKHHHERYNGQGYPDGLSGD
HHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
HISTRAKVVNLVDTYFAIISKRFHRAQYPKKEALRIIESEKGKSFDPKVVEVFKRVISKS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
IES
CCC
>Mature Secondary Structure
MEKSIGDLKKYSKRAVAAVWINYIVWTVIAIVLISSIYTKSVRDRATMAKENFESILQMI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVNPELPGVFIEPVEDGTVRGIELERLIGDQNFSIGEGILCEETSFKFLKKENDKGYLVE
HCCCCCCCEEEECCCCCCCCCEEHHHHHCCCCCCCCCCEEECCCHHHHHHCCCCCCEEEE
VPIKFIEKFFNVPKIIWYIADENGKILYSSTPLVLSESSKDVLKGSDHFYQFTTFNILGS
ECHHHHHHHHCCCEEEEEEECCCCEEEEECCCEEEECCCHHHHCCCCCEEEEEEEEECCC
DYVLGIGEQWINSLMFLLVSLGIIIFISYLPLALTISKIAAETNEIQNDQKELSKVLENR
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
DRKVIVHYKEHIKLLTAIKSCSSERKKLLNELGKLREGLEKCKKKIELEREIARAHFKKL
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTALGQEIEERSHSVTPDIKTMVEVALLTAQELGVQDEEELEAIEFGVILHDIGMIEIPE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCH
SILHKPGILTENERAIVEKHPLIGARLVSQLSLSPLLEDIIKHHHERYNGQGYPDGLSGD
HHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
HISTRAKVVNLVDTYFAIISKRFHRAQYPKKEALRIIESEKGKSFDPKVVEVFKRVISKS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
IES
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]