Click here to switch to the map view.

The map label for this gene is ycbC [C]

Identifier: 239617397

GI number: 239617397

Start: 1066273

End: 1067037

Strand: Reverse

Name: ycbC [C]

Synonym: Kole_1007

Alternate gene names: 239617397

Gene position: 1067037-1066273 (Counterclockwise)

Preceding gene: 239617398

Following gene: 239617396

Centisome position: 46.35

GC content: 39.61

Gene sequence:

>765_bases
ATGTTTTATCTTGAAAAAGTGATCAGTTCTATACTCGTTCCACCAGGAATCATAATGGTTTTAATTATCATAATTGGCCT
GATCAGCCTTAAAAAGGCAATTTCTCCTCTCCAGAAAATGTTGTCATTTTCTATCCTTATTATCGGGCTCTTCTCGTATC
TCTTAATGAGCGGTATAGGTACTTACCTTTACGTAAAGCCTCTGGAAACTGAATATTCGGTACCAAATGCCTCACTTTTA
GATACAGCTGAAGCAATTGTTGTTCTGGGAGGGGGAATGATCATAGCTCCGTATGAACTCGAACCAGGTGATCATACTCT
CAAAAGGCTTTATAAAGCTTTTCAGATACATAGAGCAACAGGTAAACCAATCATTGTTACAGGTGGAACACCCATGGGAC
GTGATTCACTATCGGAAAGTGAGGTAATGTTGAACACGCTGCTCAATTGGGGAATAGATGAAAACGATGTAATTGTTGAA
AACTCAGCGAGGAATACCAATGAGAATGCGGTTCGAGTTGCCGAAATCTGTAAAGAAAAGAAATGGAAAAAGATAGTTCT
GGTAACTTCGGCTGTACATATGAAACGATCCGTGGAAAGTTTTGAAGAACAGGGATTGAACGTGATCCCTTATCCAACGG
ATTACCTTTACGACTATACCGATTTGAGCTGGGTTGACTTCCTTCCAGGTAGAGACGCTTTAACTGCAAATCTTTCAGGA
ATACATGAATTTATCGGTATTATCTGGTACAACGCAAAAAGGTAG

Upstream 100 bases:

>100_bases
CCAGAATTAGCACTCAAAGTCAGACAGCACTGCGATTTCTTTATCACCGATAACCTTCTTTCCATTCTCGCCCTGAAAGG
TGGAAGATAGGGGGTTTTAG

Downstream 100 bases:

>100_bases
GGGAAAGTATGTGCGATACCCTTGTAGTAGCTCCAAAATTAACCAGCGGAATCCTCTTCTTCGCTAAAAACAGCGATCGG
GAACCAAATGAACCCCAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MFYLEKVISSILVPPGIIMVLIIIIGLISLKKAISPLQKMLSFSILIIGLFSYLLMSGIGTYLYVKPLETEYSVPNASLL
DTAEAIVVLGGGMIIAPYELEPGDHTLKRLYKAFQIHRATGKPIIVTGGTPMGRDSLSESEVMLNTLLNWGIDENDVIVE
NSARNTNENAVRVAEICKEKKWKKIVLVTSAVHMKRSVESFEEQGLNVIPYPTDYLYDYTDLSWVDFLPGRDALTANLSG
IHEFIGIIWYNAKR

Sequences:

>Translated_254_residues
MFYLEKVISSILVPPGIIMVLIIIIGLISLKKAISPLQKMLSFSILIIGLFSYLLMSGIGTYLYVKPLETEYSVPNASLL
DTAEAIVVLGGGMIIAPYELEPGDHTLKRLYKAFQIHRATGKPIIVTGGTPMGRDSLSESEVMLNTLLNWGIDENDVIVE
NSARNTNENAVRVAEICKEKKWKKIVLVTSAVHMKRSVESFEEQGLNVIPYPTDYLYDYTDLSWVDFLPGRDALTANLSG
IHEFIGIIWYNAKR
>Mature_254_residues
MFYLEKVISSILVPPGIIMVLIIIIGLISLKKAISPLQKMLSFSILIIGLFSYLLMSGIGTYLYVKPLETEYSVPNASLL
DTAEAIVVLGGGMIIAPYELEPGDHTLKRLYKAFQIHRATGKPIIVTGGTPMGRDSLSESEVMLNTLLNWGIDENDVIVE
NSARNTNENAVRVAEICKEKKWKKIVLVTSAVHMKRSVESFEEQGLNVIPYPTDYLYDYTDLSWVDFLPGRDALTANLSG
IHEFIGIIWYNAKR

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=191, Percent_Identity=28.2722513089005, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 28327; Mature: 28327

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYLEKVISSILVPPGIIMVLIIIIGLISLKKAISPLQKMLSFSILIIGLFSYLLMSGIG
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TYLYVKPLETEYSVPNASLLDTAEAIVVLGGGMIIAPYELEPGDHTLKRLYKAFQIHRAT
CEEEEEECCCCCCCCCCHHHHHHHEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHCCC
GKPIIVTGGTPMGRDSLSESEVMLNTLLNWGIDENDVIVENSARNTNENAVRVAEICKEK
CCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHC
KWKKIVLVTSAVHMKRSVESFEEQGLNVIPYPTDYLYDYTDLSWVDFLPGRDALTANLSG
CCCEEEEEHHHHHHHHHHHHHHHCCCEECCCCCHHHCCCCCCCHHCCCCCCCHHHHHHHH
IHEFIGIIWYNAKR
HHHHHHHHEECCCC
>Mature Secondary Structure
MFYLEKVISSILVPPGIIMVLIIIIGLISLKKAISPLQKMLSFSILIIGLFSYLLMSGIG
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TYLYVKPLETEYSVPNASLLDTAEAIVVLGGGMIIAPYELEPGDHTLKRLYKAFQIHRAT
CEEEEEECCCCCCCCCCHHHHHHHEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHCCC
GKPIIVTGGTPMGRDSLSESEVMLNTLLNWGIDENDVIVENSARNTNENAVRVAEICKEK
CCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHC
KWKKIVLVTSAVHMKRSVESFEEQGLNVIPYPTDYLYDYTDLSWVDFLPGRDALTANLSG
CCCEEEEEHHHHHHHHHHHHHHHCCCEECCCCCHHHCCCCCCCHHCCCCCCCHHHHHHHH
IHEFIGIIWYNAKR
HHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]