| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617346
Identifier: 239617346
GI number: 239617346
Start: 1010977
End: 1011423
Strand: Direct
Name: 239617346
Synonym: Kole_0955
Alternate gene names: NA
Gene position: 1010977-1011423 (Clockwise)
Preceding gene: 239617345
Following gene: 239617347
Centisome position: 43.91
GC content: 42.95
Gene sequence:
>447_bases ATGAAAAGGCTCTACAAATCACGAAAAGACAAAGTGATCGACGGAGTTTGTGGCGGGATAGCCGAATATTTTGGAATAGA CCCGACAATAATAAGGCTTATCTGGGTACTGCTCCTCTTCGCCCATGGCGCAGGGTTAATCCTTTATCTCATCGCCATGA TTATCATTCCGCGAGAACCACTGGGTGCTTCTGCAGAAAATACGGATCAAAGCGCTGAACGTTCGGTTAACACTACCCCG ACTTCTTTAGAGGACAAAGAGAATAAAATTGACAAAAATCGATTGTTAATGGCTCTCATTGTGATTGTAATTGGGTTTGT CCTCTTGATGAGTTCTTTCACTACTTTTACAATATTTTCGGTAGTCTTCGGAAAGATTTTCCTTGGTGTCCTGCTCATGG CAGGAGGGGGTTATTTGTTGTACAAGCTGGTTAAAGAAGGGGAGTGA
Upstream 100 bases:
>100_bases ACTGACAAAAAGGATAGAAGCATTACCTGAAAACCAGGAGCTTATCGGTCAATTAATGGCCGGGGTGAACTTCGAGAAAT ACCTTTAAAGGAGGGATCTT
Downstream 100 bases:
>100_bases AATCCTTGAAACTAGCCCTTGGATTAATTCTCGTCATTTTAGGCATTTTACTCGTTACTGGAAACCTTACAATGGATTCG TTTCATAACGTGATGTTTAA
Product: phage shock protein C, PspC
Products: NA
Alternate protein names: Stress-Responsive Transcriptional Regulator; Phage Shock Protein C; PspC Domain-Containing Protein; Phage Shock Protein PspC; Transcription Regulator PspC Family; Stress-Responsive Transcriptional Regulator PspC; PspC Domain Protein
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKRLYKSRKDKVIDGVCGGIAEYFGIDPTIIRLIWVLLLFAHGAGLILYLIAMIIIPREPLGASAENTDQSAERSVNTTP TSLEDKENKIDKNRLLMALIVIVIGFVLLMSSFTTFTIFSVVFGKIFLGVLLMAGGGYLLYKLVKEGE
Sequences:
>Translated_148_residues MKRLYKSRKDKVIDGVCGGIAEYFGIDPTIIRLIWVLLLFAHGAGLILYLIAMIIIPREPLGASAENTDQSAERSVNTTP TSLEDKENKIDKNRLLMALIVIVIGFVLLMSSFTTFTIFSVVFGKIFLGVLLMAGGGYLLYKLVKEGE >Mature_148_residues MKRLYKSRKDKVIDGVCGGIAEYFGIDPTIIRLIWVLLLFAHGAGLILYLIAMIIIPREPLGASAENTDQSAERSVNTTP TSLEDKENKIDKNRLLMALIVIVIGFVLLMSSFTTFTIFSVVFGKIFLGVLLMAGGGYLLYKLVKEGE
Specific function: Unknown
COG id: COG1983
COG function: function code KT; Putative stress-responsive transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16344; Mature: 16344
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLYKSRKDKVIDGVCGGIAEYFGIDPTIIRLIWVLLLFAHGAGLILYLIAMIIIPREP CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC LGASAENTDQSAERSVNTTPTSLEDKENKIDKNRLLMALIVIVIGFVLLMSSFTTFTIFS CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVFGKIFLGVLLMAGGGYLLYKLVKEGE HHHHHHHHHHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure MKRLYKSRKDKVIDGVCGGIAEYFGIDPTIIRLIWVLLLFAHGAGLILYLIAMIIIPREP CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC LGASAENTDQSAERSVNTTPTSLEDKENKIDKNRLLMALIVIVIGFVLLMSSFTTFTIFS CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVFGKIFLGVLLMAGGGYLLYKLVKEGE HHHHHHHHHHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA