| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is yufQ [H]
Identifier: 239617344
GI number: 239617344
Start: 1008537
End: 1009469
Strand: Direct
Name: yufQ [H]
Synonym: Kole_0953
Alternate gene names: 239617344
Gene position: 1008537-1009469 (Clockwise)
Preceding gene: 239617343
Following gene: 239617345
Centisome position: 43.81
GC content: 45.66
Gene sequence:
>933_bases ATGTCTGAACTTCTTTCTATTACAACCGATCTGGCAAAAGCAGCCGTGAGAGCAGGAACTCCATTACTATTCGCGGCCGC CGGCGAGCTATTAACGGAGCGCTCCGGTGTACTCAACCTTGGAATCGAGGGAACCATGTTAATGGGTGCGATAACAGGGT TTGCTGTCGCAGTTCAAACGGGAAACCCTTACTTCGGAATACTCGCAGCAGCAGTAGTTGGAGCTATTTTTGGATACATA TATTCTCTTTTTGTGGTAAATATGGGGCTCAATCAGGTTGTTACAGGTCTCGCCTTTATGATGATTGGAACTGGCCTGAG TGGTTATATAGGGAGAGCTTATGTTGGAATAGGTTTGAAAAACTCTCTAAAGCCCATAGAAATCCCATATCTTTCAAAGA TTCCGGTTCTCGGAAAAGCCCTTTTTTCCCAAGATATACTCGTTTATTCATCTATAATCCTCATCGCATTACTCCATTAC TGGTTATTCAAAACACAGAATGGCCTGCACCTAAGATCCGTAGGAGAATCGCCAGAAACAGCAGATTTCACAGGTATAAA CGTTTTCCTTACCAGACAGTTCGCGACTTCATTAGGAGCAACTATAATCGCTGTTGGAGGGGCTTATATTTCCATCGCCT ATTCTCCTCTGTGGGTGGAGAATATGACAGCCGGAAGAGGCTGGATAGCTCTCGCTCTGGTCATCTTTGCCGGCTGGAGA CCATGGAGGGCTTTGCTGGGTGCATATCTTTTCGGGGGAATCTCCGCATTGCAGTATCGTGCGCAGGTTTTAAATGTGAA GCTTTCCCCCTACATTATGGATATGTTCCCGTACCTGCTTACTGTACTGATAATGATTTTCATATCCTCTGAAGCTGCAA GGCGGAAACTCGGTGCGCCTTCAGCAATTGGAATACCTTACAGGAGAAGATAG
Upstream 100 bases:
>100_bases AGTTTCTTCCAGGGAATTGTTCTGCTGACGCTTTTAGTCGGGGGATTCTTGCAGCGTTATCATGTTAAAGTAATCCCCCG CACCGGGAAGGTGAAACAAC
Downstream 100 bases:
>100_bases TATGCAAATCAAAATGGAGGGTATTGTCAAGAAGTTTGGTTCTGTTGTTGCTAACTCCCAAGTAGACTTTGATGTACTGC CCGGTGAAGTACACTCGCTA
Product: inner-membrane translocator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MSELLSITTDLAKAAVRAGTPLLFAAAGELLTERSGVLNLGIEGTMLMGAITGFAVAVQTGNPYFGILAAAVVGAIFGYI YSLFVVNMGLNQVVTGLAFMMIGTGLSGYIGRAYVGIGLKNSLKPIEIPYLSKIPVLGKALFSQDILVYSSIILIALLHY WLFKTQNGLHLRSVGESPETADFTGINVFLTRQFATSLGATIIAVGGAYISIAYSPLWVENMTAGRGWIALALVIFAGWR PWRALLGAYLFGGISALQYRAQVLNVKLSPYIMDMFPYLLTVLIMIFISSEAARRKLGAPSAIGIPYRRR
Sequences:
>Translated_310_residues MSELLSITTDLAKAAVRAGTPLLFAAAGELLTERSGVLNLGIEGTMLMGAITGFAVAVQTGNPYFGILAAAVVGAIFGYI YSLFVVNMGLNQVVTGLAFMMIGTGLSGYIGRAYVGIGLKNSLKPIEIPYLSKIPVLGKALFSQDILVYSSIILIALLHY WLFKTQNGLHLRSVGESPETADFTGINVFLTRQFATSLGATIIAVGGAYISIAYSPLWVENMTAGRGWIALALVIFAGWR PWRALLGAYLFGGISALQYRAQVLNVKLSPYIMDMFPYLLTVLIMIFISSEAARRKLGAPSAIGIPYRRR >Mature_309_residues SELLSITTDLAKAAVRAGTPLLFAAAGELLTERSGVLNLGIEGTMLMGAITGFAVAVQTGNPYFGILAAAVVGAIFGYIY SLFVVNMGLNQVVTGLAFMMIGTGLSGYIGRAYVGIGLKNSLKPIEIPYLSKIPVLGKALFSQDILVYSSIILIALLHYW LFKTQNGLHLRSVGESPETADFTGINVFLTRQFATSLGATIIAVGGAYISIAYSPLWVENMTAGRGWIALALVIFAGWRP WRALLGAYLFGGISALQYRAQVLNVKLSPYIMDMFPYLLTVLIMIFISSEAARRKLGAPSAIGIPYRRR
Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: COG1079
COG function: function code R; Uncharacterized ABC-type transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 33303; Mature: 33172
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELLSITTDLAKAAVRAGTPLLFAAAGELLTERSGVLNLGIEGTMLMGAITGFAVAVQT CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHEEEEEC GNPYFGILAAAVVGAIFGYIYSLFVVNMGLNQVVTGLAFMMIGTGLSGYIGRAYVGIGLK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHEEECCCC NSLKPIEIPYLSKIPVLGKALFSQDILVYSSIILIALLHYWLFKTQNGLHLRSVGESPET CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC ADFTGINVFLTRQFATSLGATIIAVGGAYISIAYSPLWVENMTAGRGWIALALVIFAGWR CCCCCEEEEEEHHHHHHHCCCEEEECCEEEEEEECCEEEECCCCCCHHHHHHHHHHHCCC PWRALLGAYLFGGISALQYRAQVLNVKLSPYIMDMFPYLLTVLIMIFISSEAARRKLGAP HHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC SAIGIPYRRR CCCCCCCCCC >Mature Secondary Structure SELLSITTDLAKAAVRAGTPLLFAAAGELLTERSGVLNLGIEGTMLMGAITGFAVAVQT CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHEEEEEC GNPYFGILAAAVVGAIFGYIYSLFVVNMGLNQVVTGLAFMMIGTGLSGYIGRAYVGIGLK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHEEECCCC NSLKPIEIPYLSKIPVLGKALFSQDILVYSSIILIALLHYWLFKTQNGLHLRSVGESPET CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC ADFTGINVFLTRQFATSLGATIIAVGGAYISIAYSPLWVENMTAGRGWIALALVIFAGWR CCCCCEEEEEEHHHHHHHCCCEEEECCEEEEEEECCEEEECCCCCCHHHHHHHHHHHCCC PWRALLGAYLFGGISALQYRAQVLNVKLSPYIMDMFPYLLTVLIMIFISSEAARRKLGAP HHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC SAIGIPYRRR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]