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The map label for this gene is med [H]

Identifier: 239617342

GI number: 239617342

Start: 1005562

End: 1006623

Strand: Direct

Name: med [H]

Synonym: Kole_0951

Alternate gene names: 239617342

Gene position: 1005562-1006623 (Clockwise)

Preceding gene: 239617341

Following gene: 239617343

Centisome position: 43.68

GC content: 47.27

Gene sequence:

>1062_bases
ATGAAAAAGCTTGGTTCGTTCGGATTAATTCTGCTAATGGGGCTGTCAATCTTTGCACTCAAAATTGGGTTCGTTTATGT
TGGCCCTGTAAGCGATGCTGGGTGGTCGTATGCACACGATCAGGGTCGCCAATACCTGGAGAAAATTTTCCCGGGCATCG
AAACGATGTATTTCGAGGCCGTGCCTGAAGGTGCGGAGTCTGTGGCAAGAATCAGGCAATTGGCCGCTGACGGTTGTGAC
ATAGTCTTTACAACAAGTTTTGGCTATATGGATCCAACCCTTGAAGTCGCAAAGGACTTTCCCGATACTATCTTCATGCA
TTGTTCAGGATTCAAAAGAGCCGAAAATGTGGGAACATACTTCGGAAGAATCTACCAGGCTGATTTCCTCGTCGGCATGG
TAGCTGGTGCGATGACAAAAACAAACATTATCGGCTATGTTGCCCCGCACCCAATTCCCGAAGTGGTCAGAGGTATAAAC
GCTTTCACTCTCGGTGTTAGAAAAGTAAATCCGTATGCTGTCGTCAAGGTCGTCTGGGTTAACGCATGGTTCGATCCCGC
CACAGAGAAAGAAGCTGCTCTCAGTTTGATAGAAGCTGGTGCAGACGTTGTAGCCCACGGTCAGGACTCTCCCGCTGTGA
ACCAAACAGCACAGGAACATGGTGTCTGGTCGATAGGTTACAACAATGATATGTCAGCTTTTGCGCCGGAATCTCACCTC
ACAGCGGCAATCTGGAATTGGGGCCCGCTTTACGAGAAAATAGTGAAAAGTGTTATCGATGGTACGTGGAAAAGCGAAGA
TCTGTGGCCTGGCCTTGAAATGGGCGTTGTGGACATAGCTCCCATCCATTCTGCTGTACCCCGCCCCATAAGAGCTTTTG
TTGAAACCTATAAGAAAAGAATTGCCCTCGGACAATATAAAATATTTGAAGGACCTATAAAGGATCAAAATGGCGAGGTC
AGAATACCCGAAGGGGTAGTACCAAGTGACGAAGAGCTTCTCTCCATGTACTGGTTTGTAGAAGGAGTAGAAGGAACATT
ACCAGAATCACCTGTGGAATAA

Upstream 100 bases:

>100_bases
TGAGGGATTGGGCTTGTTAGTAAAAAACTTGAATTCCAGAGAGCATTTGTGTGACAATAACTACGTCAGGTCAACTCATC
TCATCCTTAGGGGGGATTGT

Downstream 100 bases:

>100_bases
GTGAAAAGCTATGCGTAAGAGCCTGTTATTACTCTCCATAGTTGCTATCACAACAGCGTTTATCGTTTCCGGAATATATC
TGGCAGAAGTGCAAAAAGGC

Product: basic membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MKKLGSFGLILLMGLSIFALKIGFVYVGPVSDAGWSYAHDQGRQYLEKIFPGIETMYFEAVPEGAESVARIRQLAADGCD
IVFTTSFGYMDPTLEVAKDFPDTIFMHCSGFKRAENVGTYFGRIYQADFLVGMVAGAMTKTNIIGYVAPHPIPEVVRGIN
AFTLGVRKVNPYAVVKVVWVNAWFDPATEKEAALSLIEAGADVVAHGQDSPAVNQTAQEHGVWSIGYNNDMSAFAPESHL
TAAIWNWGPLYEKIVKSVIDGTWKSEDLWPGLEMGVVDIAPIHSAVPRPIRAFVETYKKRIALGQYKIFEGPIKDQNGEV
RIPEGVVPSDEELLSMYWFVEGVEGTLPESPVE

Sequences:

>Translated_353_residues
MKKLGSFGLILLMGLSIFALKIGFVYVGPVSDAGWSYAHDQGRQYLEKIFPGIETMYFEAVPEGAESVARIRQLAADGCD
IVFTTSFGYMDPTLEVAKDFPDTIFMHCSGFKRAENVGTYFGRIYQADFLVGMVAGAMTKTNIIGYVAPHPIPEVVRGIN
AFTLGVRKVNPYAVVKVVWVNAWFDPATEKEAALSLIEAGADVVAHGQDSPAVNQTAQEHGVWSIGYNNDMSAFAPESHL
TAAIWNWGPLYEKIVKSVIDGTWKSEDLWPGLEMGVVDIAPIHSAVPRPIRAFVETYKKRIALGQYKIFEGPIKDQNGEV
RIPEGVVPSDEELLSMYWFVEGVEGTLPESPVE
>Mature_353_residues
MKKLGSFGLILLMGLSIFALKIGFVYVGPVSDAGWSYAHDQGRQYLEKIFPGIETMYFEAVPEGAESVARIRQLAADGCD
IVFTTSFGYMDPTLEVAKDFPDTIFMHCSGFKRAENVGTYFGRIYQADFLVGMVAGAMTKTNIIGYVAPHPIPEVVRGIN
AFTLGVRKVNPYAVVKVVWVNAWFDPATEKEAALSLIEAGADVVAHGQDSPAVNQTAQEHGVWSIGYNNDMSAFAPESHL
TAAIWNWGPLYEKIVKSVIDGTWKSEDLWPGLEMGVVDIAPIHSAVPRPIRAFVETYKKRIALGQYKIFEGPIKDQNGEV
RIPEGVVPSDEELLSMYWFVEGVEGTLPESPVE

Specific function: Positive activator of the comK gene [H]

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 38834; Mature: 38834

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLGSFGLILLMGLSIFALKIGFVYVGPVSDAGWSYAHDQGRQYLEKIFPGIETMYFEA
CCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
VPEGAESVARIRQLAADGCDIVFTTSFGYMDPTLEVAKDFPDTIFMHCSGFKRAENVGTY
CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHCCCHHEEEECCCCHHHHHHHHH
FGRIYQADFLVGMVAGAMTKTNIIGYVAPHPIPEVVRGINAFTLGVRKVNPYAVVKVVWV
HHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHCCCCEEEEEEECCCEEEEEEEEE
NAWFDPATEKEAALSLIEAGADVVAHGQDSPAVNQTAQEHGVWSIGYNNDMSAFAPESHL
ECCCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCC
TAAIWNWGPLYEKIVKSVIDGTWKSEDLWPGLEMGVVDIAPIHSAVPRPIRAFVETYKKR
EEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHHCCHHHHHHHHHHHHH
IALGQYKIFEGPIKDQNGEVRIPEGVVPSDEELLSMYWFVEGVEGTLPESPVE
HHHCCEEEECCCCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKKLGSFGLILLMGLSIFALKIGFVYVGPVSDAGWSYAHDQGRQYLEKIFPGIETMYFEA
CCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
VPEGAESVARIRQLAADGCDIVFTTSFGYMDPTLEVAKDFPDTIFMHCSGFKRAENVGTY
CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHCCCHHEEEECCCCHHHHHHHHH
FGRIYQADFLVGMVAGAMTKTNIIGYVAPHPIPEVVRGINAFTLGVRKVNPYAVVKVVWV
HHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHCCCCEEEEEEECCCEEEEEEEEE
NAWFDPATEKEAALSLIEAGADVVAHGQDSPAVNQTAQEHGVWSIGYNNDMSAFAPESHL
ECCCCCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCC
TAAIWNWGPLYEKIVKSVIDGTWKSEDLWPGLEMGVVDIAPIHSAVPRPIRAFVETYKKR
EEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHHCCHHHHHHHHHHHHH
IALGQYKIFEGPIKDQNGEVRIPEGVVPSDEELLSMYWFVEGVEGTLPESPVE
HHHCCEEEECCCCCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9335269; 9384377 [H]