| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239617305
Identifier: 239617305
GI number: 239617305
Start: 966715
End: 967608
Strand: Direct
Name: 239617305
Synonym: Kole_0914
Alternate gene names: NA
Gene position: 966715-967608 (Clockwise)
Preceding gene: 239617304
Following gene: 239617306
Centisome position: 41.99
GC content: 37.81
Gene sequence:
>894_bases GTGCTAAGTAAGAAAATTCTGGCGAATATCTATCTACTTCTTGTCGTGGTTTTCTGGGGACTAACTTTTCCGCTGCAGAA AGTTATTCTTATAAACTCATTATCGCCGGCTTTTTACAATGCTTTACGTTTTTTTATGGCTATCATTTTCTTGATTCCTT TTAAGGCTTTTAGGAAAAACTTCTTCAGCTCTTTAAAAGAAGAATTATTTCATGGAGTAATTCTTGGATTATTTCTCTCT GGTGGATATGTTTTTCAAACGTGGGGGTTAGTTTATACAACAGCGTCCAAAAGTGCCTTCATAACAGCTTTGTATGTTGG ATTGGTGGCTATTATGGCTCCTTTTTTAGAAAGAAAAGCTCCTACATTCTTACAAATTGTGGCGCTTGGAATTTCTATCA TGGCACTTTATTTCCTCACGAGTCCAGCCGGTGGCGGTTTTAATTTAGGCGATTTTCTGACTCTGTTATGTGCAATATCG TATGCTTTGCATGTCCTTTTCATAACACATTTCACCCGGGAAAATGAATCTGAACTTTCTCTCCTCTTACCACAGCTTGT AACAGTTATGCTGGTTAACGTTATTTTGATACCGGTTATTCCAGGTAAAGTGATTTTGAACCGGGAAATATTTTTTACAG CCGTTTTTGCCGCTATTTTTGCTACAATTTTTGCCATAGCTATTCAATTGAAGTATCAGAAGTATGTAGGCTCTCTCGGT TCATCGTTAGTTTACGTTGGTGAGCCCGCTTTTGCACTACTTTTTGCAGTTATCTTGCTGGGGGAAAAAATCACAATGAT TGAAGGACTTGGGTTGATAATGATGGTCGTCGGGATAATTCTTGGAAGTTTGTCAACGATTAAAGAAAAAGAACAGGAAA GTGAGGTGGGATAA
Upstream 100 bases:
>100_bases TAAATTATACCACAAGAATCATGGTTAGTCAAGCTTTGTGTATGTAATATGATAGTAATCTTAGACTTTTCTGAGGTATT GCGGGAGGGAATACATAATT
Downstream 100 bases:
>100_bases CTTGAAAGCAAAAGTGCTTCTCGTAGAGGATGATCCTCACATAAGAAAATTCATTCAGCTGGAACTCGAACACGAAGGCT ATGAAGTAAAAACAGCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MLSKKILANIYLLLVVVFWGLTFPLQKVILINSLSPAFYNALRFFMAIIFLIPFKAFRKNFFSSLKEELFHGVILGLFLS GGYVFQTWGLVYTTASKSAFITALYVGLVAIMAPFLERKAPTFLQIVALGISIMALYFLTSPAGGGFNLGDFLTLLCAIS YALHVLFITHFTRENESELSLLLPQLVTVMLVNVILIPVIPGKVILNREIFFTAVFAAIFATIFAIAIQLKYQKYVGSLG SSLVYVGEPAFALLFAVILLGEKITMIEGLGLIMMVVGIILGSLSTIKEKEQESEVG
Sequences:
>Translated_297_residues MLSKKILANIYLLLVVVFWGLTFPLQKVILINSLSPAFYNALRFFMAIIFLIPFKAFRKNFFSSLKEELFHGVILGLFLS GGYVFQTWGLVYTTASKSAFITALYVGLVAIMAPFLERKAPTFLQIVALGISIMALYFLTSPAGGGFNLGDFLTLLCAIS YALHVLFITHFTRENESELSLLLPQLVTVMLVNVILIPVIPGKVILNREIFFTAVFAAIFATIFAIAIQLKYQKYVGSLG SSLVYVGEPAFALLFAVILLGEKITMIEGLGLIMMVVGIILGSLSTIKEKEQESEVG >Mature_297_residues MLSKKILANIYLLLVVVFWGLTFPLQKVILINSLSPAFYNALRFFMAIIFLIPFKAFRKNFFSSLKEELFHGVILGLFLS GGYVFQTWGLVYTTASKSAFITALYVGLVAIMAPFLERKAPTFLQIVALGISIMALYFLTSPAGGGFNLGDFLTLLCAIS YALHVLFITHFTRENESELSLLLPQLVTVMLVNVILIPVIPGKVILNREIFFTAVFAAIFATIFAIAIQLKYQKYVGSLG SSLVYVGEPAFALLFAVILLGEKITMIEGLGLIMMVVGIILGSLSTIKEKEQESEVG
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32721; Mature: 32721
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSKKILANIYLLLVVVFWGLTFPLQKVILINSLSPAFYNALRFFMAIIFLIPFKAFRKN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FFSSLKEELFHGVILGLFLSGGYVFQTWGLVYTTASKSAFITALYVGLVAIMAPFLERKA HHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCC PTFLQIVALGISIMALYFLTSPAGGGFNLGDFLTLLCAISYALHVLFITHFTRENESELS CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LLLPQLVTVMLVNVILIPVIPGKVILNREIFFTAVFAAIFATIFAIAIQLKYQKYVGSLG HHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SSLVYVGEPAFALLFAVILLGEKITMIEGLGLIMMVVGIILGSLSTIKEKEQESEVG CCEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLSKKILANIYLLLVVVFWGLTFPLQKVILINSLSPAFYNALRFFMAIIFLIPFKAFRKN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FFSSLKEELFHGVILGLFLSGGYVFQTWGLVYTTASKSAFITALYVGLVAIMAPFLERKA HHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCC PTFLQIVALGISIMALYFLTSPAGGGFNLGDFLTLLCAISYALHVLFITHFTRENESELS CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LLLPQLVTVMLVNVILIPVIPGKVILNREIFFTAVFAAIFATIFAIAIQLKYQKYVGSLG HHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SSLVYVGEPAFALLFAVILLGEKITMIEGLGLIMMVVGIILGSLSTIKEKEQESEVG CCEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]