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The map label for this gene is elbB [H]

Identifier: 239617221

GI number: 239617221

Start: 876202

End: 876822

Strand: Direct

Name: elbB [H]

Synonym: Kole_0829

Alternate gene names: 239617221

Gene position: 876202-876822 (Clockwise)

Preceding gene: 239617218

Following gene: 239617224

Centisome position: 38.06

GC content: 37.68

Gene sequence:

>621_bases
GTGAAAGCGGGCATTCTTTTATCCGGTTGCGGCTTAGGCGATGGTACTCAGATCGAAGAAGTTATGCTTACATATCTATC
TCTAGATAAGTACGGAATAGACTATATAACCTTTGCCCCTAACGAAATGCAACATGATGTAATCGATCATTATACGGAAA
AACCTCAAAATGAAAAAAGAAATATATTGATTGAGTCTGCACGAATCGGTAGAGGAAAAATCTGCGATATAAGGGAAGTC
AGTTGCAAAGATATAGATGCCATTATAATTCCTGGAGGTTTAGGGGTATTCAAGAACCTATCCACATTCATAGTAGATAA
AAAGTCCTTCACGGTTAATAAAAACGTTGACGATTTATTGAAAGCCATGTATTTATCAAAAAAGTCTATTGCTGGAATAT
GTGGAGCCGTTATTTTGATAGCTAAGAGTTTGTCGCAGCATGTTTCTGACTTAAAGGTTGCTACGGCTAACGATGCGTAT
GGGGAATTACTCTCAGAACTCAACGTTAATGCTGTTAATTGCTCCGCAAAAGAATGCGTGATAGATAGAAAAAAACAAAG
TAGTAACTACCCCCGCATTTCTGGCATCCAAAAAAATGGACGAAATTATGGTGGGTATTGA

Upstream 100 bases:

>100_bases
TTATGTGGCAGCTCGAACCATTGAATAATTCACATGGGAAACGCTAAAATATATCTGCAAGAATCCTTAGGATGTAAGCA
GAATAGGGGGGACAATTCTA

Downstream 100 bases:

>100_bases
CAAAATGGTGAAGGCGCTACAGGAACTGGGCTAATTGATGCCGGACACACCTGGGCGAGAGCTTCGCTCTCAGAAGCTGA
TTTGTTCTTGAGATCCTGAA

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MKAGILLSGCGLGDGTQIEEVMLTYLSLDKYGIDYITFAPNEMQHDVIDHYTEKPQNEKRNILIESARIGRGKICDIREV
SCKDIDAIIIPGGLGVFKNLSTFIVDKKSFTVNKNVDDLLKAMYLSKKSIAGICGAVILIAKSLSQHVSDLKVATANDAY
GELLSELNVNAVNCSAKECVIDRKKQSSNYPRISGIQKNGRNYGGY

Sequences:

>Translated_206_residues
MKAGILLSGCGLGDGTQIEEVMLTYLSLDKYGIDYITFAPNEMQHDVIDHYTEKPQNEKRNILIESARIGRGKICDIREV
SCKDIDAIIIPGGLGVFKNLSTFIVDKKSFTVNKNVDDLLKAMYLSKKSIAGICGAVILIAKSLSQHVSDLKVATANDAY
GELLSELNVNAVNCSAKECVIDRKKQSSNYPRISGIQKNGRNYGGY
>Mature_206_residues
MKAGILLSGCGLGDGTQIEEVMLTYLSLDKYGIDYITFAPNEMQHDVIDHYTEKPQNEKRNILIESARIGRGKICDIREV
SCKDIDAIIIPGGLGVFKNLSTFIVDKKSFTVNKNVDDLLKAMYLSKKSIAGICGAVILIAKSLSQHVSDLKVATANDAY
GELLSELNVNAVNCSAKECVIDRKKQSSNYPRISGIQKNGRNYGGY

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=144, Percent_Identity=45.8333333333333, Blast_Score=122, Evalue=2e-28,
Organism=Homo sapiens, GI296531408, Length=117, Percent_Identity=41.8803418803419, Blast_Score=93, Evalue=2e-19,
Organism=Escherichia coli, GI87082228, Length=190, Percent_Identity=35.7894736842105, Blast_Score=127, Evalue=6e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 22569; Mature: 22569

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAGILLSGCGLGDGTQIEEVMLTYLSLDKYGIDYITFAPNEMQHDVIDHYTEKPQNEKR
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCC
NILIESARIGRGKICDIREVSCKDIDAIIIPGGLGVFKNLSTFIVDKKSFTVNKNVDDLL
CEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCHHHEECCCCEEECCCHHHHH
KAMYLSKKSIAGICGAVILIAKSLSQHVSDLKVATANDAYGELLSELNVNAVNCSAKECV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHCCCCEECCCHHHHH
IDRKKQSSNYPRISGIQKNGRNYGGY
HHHHHCCCCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MKAGILLSGCGLGDGTQIEEVMLTYLSLDKYGIDYITFAPNEMQHDVIDHYTEKPQNEKR
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCC
NILIESARIGRGKICDIREVSCKDIDAIIIPGGLGVFKNLSTFIVDKKSFTVNKNVDDLL
CEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCHHHEECCCCEEECCCHHHHH
KAMYLSKKSIAGICGAVILIAKSLSQHVSDLKVATANDAYGELLSELNVNAVNCSAKECV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHCCCCEECCCHHHHH
IDRKKQSSNYPRISGIQKNGRNYGGY
HHHHHCCCCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]