Definition Kosmotoga olearia TBF 19.5.1, complete genome.
Accession NC_012785
Length 2,302,126

Click here to switch to the map view.

The map label for this gene is yxaM [H]

Identifier: 239617095

GI number: 239617095

Start: 752102

End: 753289

Strand: Direct

Name: yxaM [H]

Synonym: Kole_0697

Alternate gene names: 239617095

Gene position: 752102-753289 (Clockwise)

Preceding gene: 239617093

Following gene: 239617096

Centisome position: 32.67

GC content: 41.67

Gene sequence:

>1188_bases
ATGTGCCAAAATGTCGAAAGCAAGCTGAAAAGAAACATTCCTCTGTTTTACATATACCACTTCCTCACACAAATCAGAGT
TGACAATGTACTCTGGCTTCTTTATATGCAGAGTAAAGGGCTTTCGCTCTGGGAAATTGGGATCTGTGAAAGCGTTCTAC
ACATAAGTTCTCTTATTTTTGAGATCCCAACCGGAGCAGTCGGCGACTATTTCGGAAGGAAACGCTCCCTGCAGATCGGA
GCTTTTCTACACATAGTAACTTACACTCTCATGCTTTTCGGGAATTCTTTTTATGACTTCATCATAGCTTTCTTTGTTTT
TGGTTTTGCCATGACATTCATTTCAGGTTCCGATACCGCTCTCATATACGATACTTACAAGGTGCTCGGCATCGAGAAAA
ACTTCAAGAAAGCCATAGGAACCTTTATGGCGATTTTGATAATCGGAGAATTAACTTCGAATATGACGGGCGGCCTGCTC
TCTAGAATTAACTGGAATGCGGTTTATATCGGTGCGATCGTTTCAAGAAGCTTATACTTTTTATTGGTTAGTTCTTTTTA
TGAACCACCCAGGGTCTTATCAGAGAAAAACAGAAGCTATTTTCGTATCGTGAAGAATGGGGTAGCGCAGATACTCAAGA
CGAAGTTTCTGCGCTGGCTCACTATTTTCTGGGTTTCCATTTCCTTTTTCTCTTCCACTGTATATTTTTACTCCCAGACT
TATTTCAAGAGCAGGGGCTTGAGTCCTTTTCAGGTAAGTGTATGGTTTACCGTCGGATCGATTATCGGCATCTTCGTTGC
GAAATTTGCTCCAAAGCTTGATGATCTTATCGGAAGGGAAAAGGTCCTTCTCTTATCAATCGTTACCTTTTCGGTTCCTC
TGATGTTTTATGGTTATCTCCCAATCGCACTTTCAATCCTTGTGATGCTCGTAACATCAAATGTCGTAAACATTGTCGAT
ACACTGATGGGATACTATGTGAACAGAAAGATCGATTCGGAGCACAGGGCAACCGCCAATTCAGTGATCGGCATGGGCTT
CAGCCTGAGTATGATCATCTTTTTTCCGCTTTTCGGATTGCTCAGCGAAAGATTGAGCTATCCTACCGCCTTCCTGTTTG
TAGGTGTAGTAAGCCTTCTACTCCTGGCACTTTCTTTGAAAAAGATCTTAAGATATTCCAGTTACTAA

Upstream 100 bases:

>100_bases
TTTTCCGGAAATTTGGGATTAGTTTTTCTTTATGGAAAAGGTGTTATAGGCATTACAGGGCAATTTTGAAGTACGTCAAA
TCTCATGATATAATGCTGCC

Downstream 100 bases:

>100_bases
TCTGGTCTTCTTTCAATGCTTCGTTGAATTTCCTGTGAGGCTTAACAGCATAAAGAGTTATATTCTGTGAATTTGGGAGC
GAGAAATATACTGTTTTTGA

Product: major facilitator superfamily MFS_1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MCQNVESKLKRNIPLFYIYHFLTQIRVDNVLWLLYMQSKGLSLWEIGICESVLHISSLIFEIPTGAVGDYFGRKRSLQIG
AFLHIVTYTLMLFGNSFYDFIIAFFVFGFAMTFISGSDTALIYDTYKVLGIEKNFKKAIGTFMAILIIGELTSNMTGGLL
SRINWNAVYIGAIVSRSLYFLLVSSFYEPPRVLSEKNRSYFRIVKNGVAQILKTKFLRWLTIFWVSISFFSSTVYFYSQT
YFKSRGLSPFQVSVWFTVGSIIGIFVAKFAPKLDDLIGREKVLLLSIVTFSVPLMFYGYLPIALSILVMLVTSNVVNIVD
TLMGYYVNRKIDSEHRATANSVIGMGFSLSMIIFFPLFGLLSERLSYPTAFLFVGVVSLLLLALSLKKILRYSSY

Sequences:

>Translated_395_residues
MCQNVESKLKRNIPLFYIYHFLTQIRVDNVLWLLYMQSKGLSLWEIGICESVLHISSLIFEIPTGAVGDYFGRKRSLQIG
AFLHIVTYTLMLFGNSFYDFIIAFFVFGFAMTFISGSDTALIYDTYKVLGIEKNFKKAIGTFMAILIIGELTSNMTGGLL
SRINWNAVYIGAIVSRSLYFLLVSSFYEPPRVLSEKNRSYFRIVKNGVAQILKTKFLRWLTIFWVSISFFSSTVYFYSQT
YFKSRGLSPFQVSVWFTVGSIIGIFVAKFAPKLDDLIGREKVLLLSIVTFSVPLMFYGYLPIALSILVMLVTSNVVNIVD
TLMGYYVNRKIDSEHRATANSVIGMGFSLSMIIFFPLFGLLSERLSYPTAFLFVGVVSLLLLALSLKKILRYSSY
>Mature_395_residues
MCQNVESKLKRNIPLFYIYHFLTQIRVDNVLWLLYMQSKGLSLWEIGICESVLHISSLIFEIPTGAVGDYFGRKRSLQIG
AFLHIVTYTLMLFGNSFYDFIIAFFVFGFAMTFISGSDTALIYDTYKVLGIEKNFKKAIGTFMAILIIGELTSNMTGGLL
SRINWNAVYIGAIVSRSLYFLLVSSFYEPPRVLSEKNRSYFRIVKNGVAQILKTKFLRWLTIFWVSISFFSSTVYFYSQT
YFKSRGLSPFQVSVWFTVGSIIGIFVAKFAPKLDDLIGREKVLLLSIVTFSVPLMFYGYLPIALSILVMLVTSNVVNIVD
TLMGYYVNRKIDSEHRATANSVIGMGFSLSMIIFFPLFGLLSERLSYPTAFLFVGVVSLLLLALSLKKILRYSSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44931; Mature: 44931

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377 [H]