| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is yxaM [H]
Identifier: 239617095
GI number: 239617095
Start: 752102
End: 753289
Strand: Direct
Name: yxaM [H]
Synonym: Kole_0697
Alternate gene names: 239617095
Gene position: 752102-753289 (Clockwise)
Preceding gene: 239617093
Following gene: 239617096
Centisome position: 32.67
GC content: 41.67
Gene sequence:
>1188_bases ATGTGCCAAAATGTCGAAAGCAAGCTGAAAAGAAACATTCCTCTGTTTTACATATACCACTTCCTCACACAAATCAGAGT TGACAATGTACTCTGGCTTCTTTATATGCAGAGTAAAGGGCTTTCGCTCTGGGAAATTGGGATCTGTGAAAGCGTTCTAC ACATAAGTTCTCTTATTTTTGAGATCCCAACCGGAGCAGTCGGCGACTATTTCGGAAGGAAACGCTCCCTGCAGATCGGA GCTTTTCTACACATAGTAACTTACACTCTCATGCTTTTCGGGAATTCTTTTTATGACTTCATCATAGCTTTCTTTGTTTT TGGTTTTGCCATGACATTCATTTCAGGTTCCGATACCGCTCTCATATACGATACTTACAAGGTGCTCGGCATCGAGAAAA ACTTCAAGAAAGCCATAGGAACCTTTATGGCGATTTTGATAATCGGAGAATTAACTTCGAATATGACGGGCGGCCTGCTC TCTAGAATTAACTGGAATGCGGTTTATATCGGTGCGATCGTTTCAAGAAGCTTATACTTTTTATTGGTTAGTTCTTTTTA TGAACCACCCAGGGTCTTATCAGAGAAAAACAGAAGCTATTTTCGTATCGTGAAGAATGGGGTAGCGCAGATACTCAAGA CGAAGTTTCTGCGCTGGCTCACTATTTTCTGGGTTTCCATTTCCTTTTTCTCTTCCACTGTATATTTTTACTCCCAGACT TATTTCAAGAGCAGGGGCTTGAGTCCTTTTCAGGTAAGTGTATGGTTTACCGTCGGATCGATTATCGGCATCTTCGTTGC GAAATTTGCTCCAAAGCTTGATGATCTTATCGGAAGGGAAAAGGTCCTTCTCTTATCAATCGTTACCTTTTCGGTTCCTC TGATGTTTTATGGTTATCTCCCAATCGCACTTTCAATCCTTGTGATGCTCGTAACATCAAATGTCGTAAACATTGTCGAT ACACTGATGGGATACTATGTGAACAGAAAGATCGATTCGGAGCACAGGGCAACCGCCAATTCAGTGATCGGCATGGGCTT CAGCCTGAGTATGATCATCTTTTTTCCGCTTTTCGGATTGCTCAGCGAAAGATTGAGCTATCCTACCGCCTTCCTGTTTG TAGGTGTAGTAAGCCTTCTACTCCTGGCACTTTCTTTGAAAAAGATCTTAAGATATTCCAGTTACTAA
Upstream 100 bases:
>100_bases TTTTCCGGAAATTTGGGATTAGTTTTTCTTTATGGAAAAGGTGTTATAGGCATTACAGGGCAATTTTGAAGTACGTCAAA TCTCATGATATAATGCTGCC
Downstream 100 bases:
>100_bases TCTGGTCTTCTTTCAATGCTTCGTTGAATTTCCTGTGAGGCTTAACAGCATAAAGAGTTATATTCTGTGAATTTGGGAGC GAGAAATATACTGTTTTTGA
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MCQNVESKLKRNIPLFYIYHFLTQIRVDNVLWLLYMQSKGLSLWEIGICESVLHISSLIFEIPTGAVGDYFGRKRSLQIG AFLHIVTYTLMLFGNSFYDFIIAFFVFGFAMTFISGSDTALIYDTYKVLGIEKNFKKAIGTFMAILIIGELTSNMTGGLL SRINWNAVYIGAIVSRSLYFLLVSSFYEPPRVLSEKNRSYFRIVKNGVAQILKTKFLRWLTIFWVSISFFSSTVYFYSQT YFKSRGLSPFQVSVWFTVGSIIGIFVAKFAPKLDDLIGREKVLLLSIVTFSVPLMFYGYLPIALSILVMLVTSNVVNIVD TLMGYYVNRKIDSEHRATANSVIGMGFSLSMIIFFPLFGLLSERLSYPTAFLFVGVVSLLLLALSLKKILRYSSY
Sequences:
>Translated_395_residues MCQNVESKLKRNIPLFYIYHFLTQIRVDNVLWLLYMQSKGLSLWEIGICESVLHISSLIFEIPTGAVGDYFGRKRSLQIG AFLHIVTYTLMLFGNSFYDFIIAFFVFGFAMTFISGSDTALIYDTYKVLGIEKNFKKAIGTFMAILIIGELTSNMTGGLL SRINWNAVYIGAIVSRSLYFLLVSSFYEPPRVLSEKNRSYFRIVKNGVAQILKTKFLRWLTIFWVSISFFSSTVYFYSQT YFKSRGLSPFQVSVWFTVGSIIGIFVAKFAPKLDDLIGREKVLLLSIVTFSVPLMFYGYLPIALSILVMLVTSNVVNIVD TLMGYYVNRKIDSEHRATANSVIGMGFSLSMIIFFPLFGLLSERLSYPTAFLFVGVVSLLLLALSLKKILRYSSY >Mature_395_residues MCQNVESKLKRNIPLFYIYHFLTQIRVDNVLWLLYMQSKGLSLWEIGICESVLHISSLIFEIPTGAVGDYFGRKRSLQIG AFLHIVTYTLMLFGNSFYDFIIAFFVFGFAMTFISGSDTALIYDTYKVLGIEKNFKKAIGTFMAILIIGELTSNMTGGLL SRINWNAVYIGAIVSRSLYFLLVSSFYEPPRVLSEKNRSYFRIVKNGVAQILKTKFLRWLTIFWVSISFFSSTVYFYSQT YFKSRGLSPFQVSVWFTVGSIIGIFVAKFAPKLDDLIGREKVLLLSIVTFSVPLMFYGYLPIALSILVMLVTSNVVNIVD TLMGYYVNRKIDSEHRATANSVIGMGFSLSMIIFFPLFGLLSERLSYPTAFLFVGVVSLLLLALSLKKILRYSSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44931; Mature: 44931
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCQNVESKLKRNIPLFYIYHFLTQIRVDNVLWLLYMQSKGLSLWEIGICESVLHISSLIF CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCEEHHHHHHHHHHHHHHHH EIPTGAVGDYFGRKRSLQIGAFLHIVTYTLMLFGNSFYDFIIAFFVFGFAMTFISGSDTA HCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCE LIYDTYKVLGIEKNFKKAIGTFMAILIIGELTSNMTGGLLSRINWNAVYIGAIVSRSLYF EEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEHHHHHHHHHHH LLVSSFYEPPRVLSEKNRSYFRIVKNGVAQILKTKFLRWLTIFWVSISFFSSTVYFYSQT HHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFKSRGLSPFQVSVWFTVGSIIGIFVAKFAPKLDDLIGREKVLLLSIVTFSVPLMFYGYL HHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH PIALSILVMLVTSNVVNIVDTLMGYYVNRKIDSEHRATANSVIGMGFSLSMIIFFPLFGL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH LSERLSYPTAFLFVGVVSLLLLALSLKKILRYSSY HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MCQNVESKLKRNIPLFYIYHFLTQIRVDNVLWLLYMQSKGLSLWEIGICESVLHISSLIF CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCEEHHHHHHHHHHHHHHHH EIPTGAVGDYFGRKRSLQIGAFLHIVTYTLMLFGNSFYDFIIAFFVFGFAMTFISGSDTA HCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCE LIYDTYKVLGIEKNFKKAIGTFMAILIIGELTSNMTGGLLSRINWNAVYIGAIVSRSLYF EEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEHHHHHHHHHHH LLVSSFYEPPRVLSEKNRSYFRIVKNGVAQILKTKFLRWLTIFWVSISFFSSTVYFYSQT HHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFKSRGLSPFQVSVWFTVGSIIGIFVAKFAPKLDDLIGREKVLLLSIVTFSVPLMFYGYL HHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHH PIALSILVMLVTSNVVNIVDTLMGYYVNRKIDSEHRATANSVIGMGFSLSMIIFFPLFGL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH LSERLSYPTAFLFVGVVSLLLLALSLKKILRYSSY HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377 [H]