| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is yjiL [C]
Identifier: 239617025
GI number: 239617025
Start: 671139
End: 672926
Strand: Direct
Name: yjiL [C]
Synonym: Kole_0626
Alternate gene names: 239617025
Gene position: 671139-672926 (Clockwise)
Preceding gene: 239617024
Following gene: 239617026
Centisome position: 29.15
GC content: 44.07
Gene sequence:
>1788_bases ATGGATTTAAAAAGTATTGGTGTATGTGTAGGATCAAGCAATATCTCATATTATGACGGAATTAAAGGAGAAAATGTTTC TCACCATGGCAATCCCATGGAGATTTTGAAGGAACTGATACCTCGTTTCTTGATAGATGGGAATGTCATTGTCACCGGTA GAAAAGCAAAAAAGATGGTGAAACTTTCCCAGATACCAGAGGTTGAAGCAACTGAAATTGCGTACAACACACTCCGGGAT AAATACGGCGCTGTGGAGGGTATTGTTAGCGCCGGTGGAGAGAACTTCATACTCTACAAGCTCAACGAAAAGGGTTCGAT AATCGGAATATATACTGGCAGTAAGTGTGCGTCTGGTACGGGTGAATTCTTTTTGCAACAGTTGAAGAGAATGGATGTAT CCCTGGATTTTGCCAATTCCATCGAGATTGATGAATGCTACGAACTTTCATCCAGATGCACTGTTTTTTGCAAAAGTGAT TGCACACATGCTCTCAACAAATGCGTGCCCAAAGAACTGATTTTGAACGGTCTTGGAAAGGTCATGGCAGAAAAAATAAT GGAACTTGTTCATAAAAGTGGTGTGAAGAAAATCATGCTTGTTGGGGGAACTGCAAGAAACAAAGTAATGGTTAAGCATC TCCTAAAGCGAATCGATTTGGTAATCCCGGATGAAGCTCTCTTTTTCGAAGCCTTTGGTGCGCACGTGTGGGGAAAGAGA AACAGCGCATTTGCTTTCAAAGCTCAAGGCACGATATTCGTGGAAAGCCCGTCAAGCTTTTCCAGGCATGCACCTTTGAA GAAGTTCCTCAACATGGTGGAATTCAAAAAAATGAACTTTGAAAAAGCGCAAAATGGCAATGATTGCATCCTCGGTGTAG ATGTAGGTTCAACAACCACCAAAGCTGTTCTGGTCAGATTGAGAGACAACGCAATACTCACCGGTTCATATTTAAGAACC TTGGGAGACCCAATAAGGGCGGTAAAAAATTGCTACAACGAACTGATAAAGCAACTGAAGGGAATCAATCTCAGAATCAT CGGTGTAGGCATCACCGGTTCTGGGCGTAAGGTAGTGGGTTTGTATTCACAAACTAACGCGGTGTATAACGAAATAACAG CTCATGCCAGAGCTGCGGCTTACTTTGATTCTGAGGTGGACACGATATTCGAAATTGGAGGTCAGGACGCCAAATATACT TATCTTGTGAATCGTGTCCCGACAGATTACAGCATGAACAAAGCCTGCTCCGCCGGAACGGGATCATTTCTGGAAGAGGC CACCAAAGAATCGCTGGAGGTACATTACCTGGATATAGGAGATCTGGCACTTGAAAGTGAAAACCCTCCCAACTTCAGCG ATCAATGCGCAGCTTTCATAAGTAGTGATGTTAAAACCGCCATTCACGAAGGTTTATCCAGGGAAGACATATGCGCCGGA TTGGTCTATTCCATCTGTATGAACTACCTGAACAGGGTGAAAGGTAACAGACCGGTGGGAAAGAAGATCATCATGCAAGG GGGAGTGTGCTACAACCGTGCAGTACCTGCTGCAATGGCTGCATTGACTGGCAAAAGAATTGTGATACCACCCCATCCCG GACTGATGGGGGCATACGGCGTCGCATTGATAGTGAAAGAAAACATAAAGCAGGGATTTCTGAAACCATCGAATTTTGAC CTCCGCGAACTTGCAAATAGAGAGGTGCAATACAAAGGAACCTTTATCTGTCCGGGAGGGAAAAAGAGCTATACTGCTCC CCTGAAGAATTGGACAGGTAAAAAGTAG
Upstream 100 bases:
>100_bases AGTTTTTATGGAACAACTATTGCCAGAGTCTCTAAGATCCTTGGTTTAGAAAGATTTTGCGAGCTTGGAAGGTAAACAAG CTCAGCTGAAGGTGTAAAAG
Downstream 100 bases:
>100_bases AGAGATAAAATAAAGGCAAGGGGGTGCAGTTAATGGCAAAGAAACTCTCGACAGAAGAAAAGATGGCAATAATTCTGGAA GGGCTTCGTCGAGAAAAGAG
Product: CoA-substrate-specific enzyme activase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 595; Mature: 595
Protein sequence:
>595_residues MDLKSIGVCVGSSNISYYDGIKGENVSHHGNPMEILKELIPRFLIDGNVIVTGRKAKKMVKLSQIPEVEATEIAYNTLRD KYGAVEGIVSAGGENFILYKLNEKGSIIGIYTGSKCASGTGEFFLQQLKRMDVSLDFANSIEIDECYELSSRCTVFCKSD CTHALNKCVPKELILNGLGKVMAEKIMELVHKSGVKKIMLVGGTARNKVMVKHLLKRIDLVIPDEALFFEAFGAHVWGKR NSAFAFKAQGTIFVESPSSFSRHAPLKKFLNMVEFKKMNFEKAQNGNDCILGVDVGSTTTKAVLVRLRDNAILTGSYLRT LGDPIRAVKNCYNELIKQLKGINLRIIGVGITGSGRKVVGLYSQTNAVYNEITAHARAAAYFDSEVDTIFEIGGQDAKYT YLVNRVPTDYSMNKACSAGTGSFLEEATKESLEVHYLDIGDLALESENPPNFSDQCAAFISSDVKTAIHEGLSREDICAG LVYSICMNYLNRVKGNRPVGKKIIMQGGVCYNRAVPAAMAALTGKRIVIPPHPGLMGAYGVALIVKENIKQGFLKPSNFD LRELANREVQYKGTFICPGGKKSYTAPLKNWTGKK
Sequences:
>Translated_595_residues MDLKSIGVCVGSSNISYYDGIKGENVSHHGNPMEILKELIPRFLIDGNVIVTGRKAKKMVKLSQIPEVEATEIAYNTLRD KYGAVEGIVSAGGENFILYKLNEKGSIIGIYTGSKCASGTGEFFLQQLKRMDVSLDFANSIEIDECYELSSRCTVFCKSD CTHALNKCVPKELILNGLGKVMAEKIMELVHKSGVKKIMLVGGTARNKVMVKHLLKRIDLVIPDEALFFEAFGAHVWGKR NSAFAFKAQGTIFVESPSSFSRHAPLKKFLNMVEFKKMNFEKAQNGNDCILGVDVGSTTTKAVLVRLRDNAILTGSYLRT LGDPIRAVKNCYNELIKQLKGINLRIIGVGITGSGRKVVGLYSQTNAVYNEITAHARAAAYFDSEVDTIFEIGGQDAKYT YLVNRVPTDYSMNKACSAGTGSFLEEATKESLEVHYLDIGDLALESENPPNFSDQCAAFISSDVKTAIHEGLSREDICAG LVYSICMNYLNRVKGNRPVGKKIIMQGGVCYNRAVPAAMAALTGKRIVIPPHPGLMGAYGVALIVKENIKQGFLKPSNFD LRELANREVQYKGTFICPGGKKSYTAPLKNWTGKK >Mature_595_residues MDLKSIGVCVGSSNISYYDGIKGENVSHHGNPMEILKELIPRFLIDGNVIVTGRKAKKMVKLSQIPEVEATEIAYNTLRD KYGAVEGIVSAGGENFILYKLNEKGSIIGIYTGSKCASGTGEFFLQQLKRMDVSLDFANSIEIDECYELSSRCTVFCKSD CTHALNKCVPKELILNGLGKVMAEKIMELVHKSGVKKIMLVGGTARNKVMVKHLLKRIDLVIPDEALFFEAFGAHVWGKR NSAFAFKAQGTIFVESPSSFSRHAPLKKFLNMVEFKKMNFEKAQNGNDCILGVDVGSTTTKAVLVRLRDNAILTGSYLRT LGDPIRAVKNCYNELIKQLKGINLRIIGVGITGSGRKVVGLYSQTNAVYNEITAHARAAAYFDSEVDTIFEIGGQDAKYT YLVNRVPTDYSMNKACSAGTGSFLEEATKESLEVHYLDIGDLALESENPPNFSDQCAAFISSDVKTAIHEGLSREDICAG LVYSICMNYLNRVKGNRPVGKKIIMQGGVCYNRAVPAAMAALTGKRIVIPPHPGLMGAYGVALIVKENIKQGFLKPSNFD LRELANREVQYKGTFICPGGKKSYTAPLKNWTGKK
Specific function: Unknown
COG id: COG1924
COG function: function code I; Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082426, Length=259, Percent_Identity=26.6409266409266, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002731 - InterPro: IPR008275 - InterPro: IPR017676 [H]
Pfam domain/function: PF01869 BcrAD_BadFG [H]
EC number: NA
Molecular weight: Translated: 65209; Mature: 65209
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLKSIGVCVGSSNISYYDGIKGENVSHHGNPMEILKELIPRFLIDGNVIVTGRKAKKMV CCCCCEEEEEECCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHH KLSQIPEVEATEIAYNTLRDKYGAVEGIVSAGGENFILYKLNEKGSIIGIYTGSKCASGT HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCC GEFFLQQLKRMDVSLDFANSIEIDECYELSSRCTVFCKSDCTHALNKCVPKELILNGLGK HHHHHHHHHHCCCEEECCCCCCHHHHHCCCCCEEEEECCHHHHHHHHCCHHHHHHHHHHH VMAEKIMELVHKSGVKKIMLVGGTARNKVMVKHLLKRIDLVIPDEALFFEAFGAHVWGKR HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCEECCCHHHHHHHHHHHHCCCC NSAFAFKAQGTIFVESPSSFSRHAPLKKFLNMVEFKKMNFEKAQNGNDCILGVDVGSTTT CCEEEEEECCEEEEECCCCCHHCCCHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCCCCC KAVLVRLRDNAILTGSYLRTLGDPIRAVKNCYNELIKQLKGINLRIIGVGITGSGRKVVG EEEEEEEECCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEE LYSQTNAVYNEITAHARAAAYFDSEVDTIFEIGGQDAKYTYLVNRVPTDYSMNKACSAGT EEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCC GSFLEEATKESLEVHYLDIGDLALESENPPNFSDQCAAFISSDVKTAIHEGLSREDICAG CHHHHHHHHCCCEEEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LVYSICMNYLNRVKGNRPVGKKIIMQGGVCYNRAVPAAMAALTGKRIVIPPHPGLMGAYG HHHHHHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHH VALIVKENIKQGFLKPSNFDLRELANREVQYKGTFICPGGKKSYTAPLKNWTGKK HHEEEHHHHHHCCCCCCCCCHHHHCCCCEEECEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDLKSIGVCVGSSNISYYDGIKGENVSHHGNPMEILKELIPRFLIDGNVIVTGRKAKKMV CCCCCEEEEEECCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHH KLSQIPEVEATEIAYNTLRDKYGAVEGIVSAGGENFILYKLNEKGSIIGIYTGSKCASGT HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCC GEFFLQQLKRMDVSLDFANSIEIDECYELSSRCTVFCKSDCTHALNKCVPKELILNGLGK HHHHHHHHHHCCCEEECCCCCCHHHHHCCCCCEEEEECCHHHHHHHHCCHHHHHHHHHHH VMAEKIMELVHKSGVKKIMLVGGTARNKVMVKHLLKRIDLVIPDEALFFEAFGAHVWGKR HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCEECCCHHHHHHHHHHHHCCCC NSAFAFKAQGTIFVESPSSFSRHAPLKKFLNMVEFKKMNFEKAQNGNDCILGVDVGSTTT CCEEEEEECCEEEEECCCCCHHCCCHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCCCCC KAVLVRLRDNAILTGSYLRTLGDPIRAVKNCYNELIKQLKGINLRIIGVGITGSGRKVVG EEEEEEEECCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEE LYSQTNAVYNEITAHARAAAYFDSEVDTIFEIGGQDAKYTYLVNRVPTDYSMNKACSAGT EEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCC GSFLEEATKESLEVHYLDIGDLALESENPPNFSDQCAAFISSDVKTAIHEGLSREDICAG CHHHHHHHHCCCEEEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LVYSICMNYLNRVKGNRPVGKKIIMQGGVCYNRAVPAAMAALTGKRIVIPPHPGLMGAYG HHHHHHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHH VALIVKENIKQGFLKPSNFDLRELANREVQYKGTFICPGGKKSYTAPLKNWTGKK HHEEEHHHHHHCCCCCCCCCHHHHCCCCEEECEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]