| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616990
Identifier: 239616990
GI number: 239616990
Start: 636671
End: 637975
Strand: Direct
Name: 239616990
Synonym: Kole_0589
Alternate gene names: NA
Gene position: 636671-637975 (Clockwise)
Preceding gene: 239616989
Following gene: 239616992
Centisome position: 27.66
GC content: 43.68
Gene sequence:
>1305_bases ATGAGAAAAGTGATCGTTTTGAGTTTGCTCCTTCTTACCACTTCATTGTTCTTTGCGTTCGGCCCAGAACTTAGTTTTGG CACAGTAACGCTTGGAGCTACCGATAGCTATTTCGTTTACATGTTCCATTATCCTGTCACAGACATAATACCTGGAATCG ATCTGGATTTTGGCTTTGACATGTATCAAACCGAGATAGGCGGTCAGATGTATTTTGGTAAACCTTCACTGGACGCCACA CCATCTACAAATGTTCTCAACGGGTTCTCAATCTACGCTGTAAGTCTCCGCACCAAATTGCTAGATTTGCGCTATGGCAA AATGGGATTCTACTCAAAAGGTATAGGCCTTCTTCTCAATTCTTACACAAAACCAAGAGCATGGGCTTTTGACGCTAACA TTAAATTCTTCCAGCCCGGGTTGTCTTTACACGTTCCATTTGAAATTGTCTCACTAAATCCGTTTGTAGTCGACAAGACC TCTTCACTCTGGTTCGGAGGCGTTTTCTTCGATCTTCCTCTGAACCTCAAACTGGATACAACCTTCGTATGGGAATCAAA TTCGGCTATAACAGACAGTGGTGAAATACCTGCTTATGGATTGACAGCTTCACTCGATTTCCCGATAGTTAACTGGAAGC TTATACGGTTGATCCCTTCTGCTGAGACAGCGATACTCGCTACCAAAGATTTCAGTCATATTGGATTCGGTGCTGGTGTT GGAGCCAGAGCTGCTATTCTCGATCTGCTGCGCATAAGGGGAGGGCTCGTTTACTATTCAGAAAACTTCATACCCGGTTA TTACAACGCAGACTATGAATACAAGAAAATGATGGAACTGTATGAAGGTCAATCATGGCTTCCGAGAATCACCGATGCAG CAACTCCTGCTCTCGGCTGGTTCATAAGAGGTGACGTTGGAATAGGTGATATGCTTATTCTCAAGGTCAACGTGGATAGC TACAATACACTGCCAAATTCTCCTGTTGTTAAAGGATATTTGCGGGTAAGAATTCCTGAGGTTAACCTTGGCAAATTCGG TGGAGTTCCAGAATTCTTTGCTGAAGCTGGTTACTACCAGGATAATTTCCCGGTAGCTGAATTGTTTGGCGAGAATTGGA AAAACGCTCTTCTAAACGAAAACACCAGACTCAGCTTTGGTGCTATATATCCTCTAGCAGGAAATATGGCAGCCCACTTC ATCGTGAATTACAACCCCGCAGCCAAAGATTTCGATTACCTCATAATGTTCGAATCACTCTCAGATAGAATGCCCGGAGC ATGGCTCGATCCTAGCGAAGATTAA
Upstream 100 bases:
>100_bases CCGTGCTTTTTTGGTTGAAAGACCGTGATTTTTTCTTTTGGAAAATTGAGTTATCAGCGTATAATTATATTGAAGCATTA CAAAAACAGGAGGTGAAAGT
Downstream 100 bases:
>100_bases TCTTTAATACTATATAGAAGACAGGGCTCCAATGATATGGAGCCCTGTCTTCATTCTACAACTTCAAACAAATCTTCTAT CGTTTCTCTCCAGATTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MRKVIVLSLLLLTTSLFFAFGPELSFGTVTLGATDSYFVYMFHYPVTDIIPGIDLDFGFDMYQTEIGGQMYFGKPSLDAT PSTNVLNGFSIYAVSLRTKLLDLRYGKMGFYSKGIGLLLNSYTKPRAWAFDANIKFFQPGLSLHVPFEIVSLNPFVVDKT SSLWFGGVFFDLPLNLKLDTTFVWESNSAITDSGEIPAYGLTASLDFPIVNWKLIRLIPSAETAILATKDFSHIGFGAGV GARAAILDLLRIRGGLVYYSENFIPGYYNADYEYKKMMELYEGQSWLPRITDAATPALGWFIRGDVGIGDMLILKVNVDS YNTLPNSPVVKGYLRVRIPEVNLGKFGGVPEFFAEAGYYQDNFPVAELFGENWKNALLNENTRLSFGAIYPLAGNMAAHF IVNYNPAAKDFDYLIMFESLSDRMPGAWLDPSED
Sequences:
>Translated_434_residues MRKVIVLSLLLLTTSLFFAFGPELSFGTVTLGATDSYFVYMFHYPVTDIIPGIDLDFGFDMYQTEIGGQMYFGKPSLDAT PSTNVLNGFSIYAVSLRTKLLDLRYGKMGFYSKGIGLLLNSYTKPRAWAFDANIKFFQPGLSLHVPFEIVSLNPFVVDKT SSLWFGGVFFDLPLNLKLDTTFVWESNSAITDSGEIPAYGLTASLDFPIVNWKLIRLIPSAETAILATKDFSHIGFGAGV GARAAILDLLRIRGGLVYYSENFIPGYYNADYEYKKMMELYEGQSWLPRITDAATPALGWFIRGDVGIGDMLILKVNVDS YNTLPNSPVVKGYLRVRIPEVNLGKFGGVPEFFAEAGYYQDNFPVAELFGENWKNALLNENTRLSFGAIYPLAGNMAAHF IVNYNPAAKDFDYLIMFESLSDRMPGAWLDPSED >Mature_434_residues MRKVIVLSLLLLTTSLFFAFGPELSFGTVTLGATDSYFVYMFHYPVTDIIPGIDLDFGFDMYQTEIGGQMYFGKPSLDAT PSTNVLNGFSIYAVSLRTKLLDLRYGKMGFYSKGIGLLLNSYTKPRAWAFDANIKFFQPGLSLHVPFEIVSLNPFVVDKT SSLWFGGVFFDLPLNLKLDTTFVWESNSAITDSGEIPAYGLTASLDFPIVNWKLIRLIPSAETAILATKDFSHIGFGAGV GARAAILDLLRIRGGLVYYSENFIPGYYNADYEYKKMMELYEGQSWLPRITDAATPALGWFIRGDVGIGDMLILKVNVDS YNTLPNSPVVKGYLRVRIPEVNLGKFGGVPEFFAEAGYYQDNFPVAELFGENWKNALLNENTRLSFGAIYPLAGNMAAHF IVNYNPAAKDFDYLIMFESLSDRMPGAWLDPSED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48375; Mature: 48375
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVIVLSLLLLTTSLFFAFGPELSFGTVTLGATDSYFVYMFHYPVTDIIPGIDLDFGFD CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCHHHHCCCCCCCCCCC MYQTEIGGQMYFGKPSLDATPSTNVLNGFSIYAVSLRTKLLDLRYGKMGFYSKGIGLLLN CEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEEHEEHHEECCCCCCCCCCHHHHEE SYTKPRAWAFDANIKFFQPGLSLHVPFEIVSLNPFVVDKTSSLWFGGVFFDLPLNLKLDT CCCCCCEEEEECCCEEECCCCEEECCEEEEEECCEEEECCCCEEEEEEEEEEEEEEEEEE TFVWESNSAITDSGEIPAYGLTASLDFPIVNWKLIRLIPSAETAILATKDFSHIGFGAGV EEEECCCCEECCCCCCCEEEEEEECCCCEECEEEEEEECCCCEEEEEECCCCCCCCCCCC GARAAILDLLRIRGGLVYYSENFIPGYYNADYEYKKMMELYEGQSWLPRITDAATPALGW CHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCHHEE FIRGDVGIGDMLILKVNVDSYNTLPNSPVVKGYLRVRIPEVNLGKFGGVPEFFAEAGYYQ EEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHCCCCC DNFPVAELFGENWKNALLNENTRLSFGAIYPLAGNMAAHFIVNYNPAAKDFDYLIMFESL CCCCHHHHHCCCHHHHHCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCEEEEEEEHH SDRMPGAWLDPSED HCCCCCCCCCCCCC >Mature Secondary Structure MRKVIVLSLLLLTTSLFFAFGPELSFGTVTLGATDSYFVYMFHYPVTDIIPGIDLDFGFD CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCHHHHCCCCCCCCCCC MYQTEIGGQMYFGKPSLDATPSTNVLNGFSIYAVSLRTKLLDLRYGKMGFYSKGIGLLLN CEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEEHEEHHEECCCCCCCCCCHHHHEE SYTKPRAWAFDANIKFFQPGLSLHVPFEIVSLNPFVVDKTSSLWFGGVFFDLPLNLKLDT CCCCCCEEEEECCCEEECCCCEEECCEEEEEECCEEEECCCCEEEEEEEEEEEEEEEEEE TFVWESNSAITDSGEIPAYGLTASLDFPIVNWKLIRLIPSAETAILATKDFSHIGFGAGV EEEECCCCEECCCCCCCEEEEEEECCCCEECEEEEEEECCCCEEEEEECCCCCCCCCCCC GARAAILDLLRIRGGLVYYSENFIPGYYNADYEYKKMMELYEGQSWLPRITDAATPALGW CHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCHHEE FIRGDVGIGDMLILKVNVDSYNTLPNSPVVKGYLRVRIPEVNLGKFGGVPEFFAEAGYYQ EEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHCCCCC DNFPVAELFGENWKNALLNENTRLSFGAIYPLAGNMAAHFIVNYNPAAKDFDYLIMFESL CCCCHHHHHCCCHHHHHCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCEEEEEEEHH SDRMPGAWLDPSED HCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA