| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is gpmA [H]
Identifier: 239616923
GI number: 239616923
Start: 568414
End: 569046
Strand: Direct
Name: gpmA [H]
Synonym: Kole_0519
Alternate gene names: 239616923
Gene position: 568414-569046 (Clockwise)
Preceding gene: 239616922
Following gene: 239616926
Centisome position: 24.69
GC content: 42.02
Gene sequence:
>633_bases ATGGATTTGCTCCTTATCAGGCATGGACATTCTGTTGGAGACGATGAAAGACGAATTAAAGGAAGCTGGGATGTCGAACT CACTCCAAAGGGTCTTAAACAGGCAAAGCTGCTCAAAGAAAGACTGGAAAAAGAGAATTACAAATGTGACCTTCTTTTTT CAAGCCCATTGAAACGTGCAGCTCAAACTGCTGAAGCAGTTTCTCAGGCTGTGGGAAAGCCTATAATCTATGATTCAAGG TTACGTGAACAGGATTCAGGAAAATTCGCGGGAATGACCAGGGAAGAGGCTTCAAAATTTAGTCCACCGCCAGATGAAAA GGGTTACAGAAACTATGTTCCGATACCTGGTGGAGAATCACTGTTAGACCATATCCGCAGGGTGAGCGAATTCTATCTCG AACTTATCGATAAGCATATGGATAAGCGAGTCTGTATAGTGACCCACGGTGGAACCATAAATGTATTGTTGCGGATCATT TATAACCTGCCTGTGAATCAACCGTATGTGGATAAACACATCTATTTGTTTGCTATGAACGATACAGCTATGTCCAGATT GATAATCAGAGGTCCACAGGATGTCATTACCTATTACCTTAATAATTTCAGCCACCTGACTGCGATAAAGTAA
Upstream 100 bases:
>100_bases CTTATTGTTGCAAAGCTTGGAAGATTGAAACACCAGCGACTCTGGAAGCAATAAAGAATTTGGTGTGGTGCTGGAAAACT AAGAGGTATGAGGTGATCGA
Downstream 100 bases:
>100_bases TTTCATAAAATAAAAGAAAAAGCCTCCTTTTATTTTATGGGAGGCTTTTTTACATAATAAGCCGTTGATACATTTTAGTT TTTTTGGTTCAATCTCATTT
Product: Phosphoglycerate mutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MDLLLIRHGHSVGDDERRIKGSWDVELTPKGLKQAKLLKERLEKENYKCDLLFSSPLKRAAQTAEAVSQAVGKPIIYDSR LREQDSGKFAGMTREEASKFSPPPDEKGYRNYVPIPGGESLLDHIRRVSEFYLELIDKHMDKRVCIVTHGGTINVLLRII YNLPVNQPYVDKHIYLFAMNDTAMSRLIIRGPQDVITYYLNNFSHLTAIK
Sequences:
>Translated_210_residues MDLLLIRHGHSVGDDERRIKGSWDVELTPKGLKQAKLLKERLEKENYKCDLLFSSPLKRAAQTAEAVSQAVGKPIIYDSR LREQDSGKFAGMTREEASKFSPPPDEKGYRNYVPIPGGESLLDHIRRVSEFYLELIDKHMDKRVCIVTHGGTINVLLRII YNLPVNQPYVDKHIYLFAMNDTAMSRLIIRGPQDVITYYLNNFSHLTAIK >Mature_210_residues MDLLLIRHGHSVGDDERRIKGSWDVELTPKGLKQAKLLKERLEKENYKCDLLFSSPLKRAAQTAEAVSQAVGKPIIYDSR LREQDSGKFAGMTREEASKFSPPPDEKGYRNYVPIPGGESLLDHIRRVSEFYLELIDKHMDKRVCIVTHGGTINVLLRII YNLPVNQPYVDKHIYLFAMNDTAMSRLIIRGPQDVITYYLNNFSHLTAIK
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI50593010, Length=212, Percent_Identity=27.8301886792453, Blast_Score=68, Evalue=5e-12, Organism=Homo sapiens, GI4505753, Length=212, Percent_Identity=26.8867924528302, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1790856, Length=172, Percent_Identity=32.5581395348837, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1786970, Length=238, Percent_Identity=27.7310924369748, Blast_Score=70, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6324857, Length=162, Percent_Identity=30.8641975308642, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 24042; Mature: 24042
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLLLIRHGHSVGDDERRIKGSWDVELTPKGLKQAKLLKERLEKENYKCDLLFSSPLKRA CCEEEEECCCCCCCCHHHCCCCCCEEECCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHH AQTAEAVSQAVGKPIIYDSRLREQDSGKFAGMTREEASKFSPPPDEKGYRNYVPIPGGES HHHHHHHHHHHCCCCEECHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHH LLDHIRRVSEFYLELIDKHMDKRVCIVTHGGTINVLLRIIYNLPVNQPYVDKHIYLFAMN HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEC DTAMSRLIIRGPQDVITYYLNNFSHLTAIK HHHHHHHHHCCHHHHHHHHHHCCCHHEECC >Mature Secondary Structure MDLLLIRHGHSVGDDERRIKGSWDVELTPKGLKQAKLLKERLEKENYKCDLLFSSPLKRA CCEEEEECCCCCCCCHHHCCCCCCEEECCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHH AQTAEAVSQAVGKPIIYDSRLREQDSGKFAGMTREEASKFSPPPDEKGYRNYVPIPGGES HHHHHHHHHHHCCCCEECHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHH LLDHIRRVSEFYLELIDKHMDKRVCIVTHGGTINVLLRIIYNLPVNQPYVDKHIYLFAMN HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEC DTAMSRLIIRGPQDVITYYLNNFSHLTAIK HHHHHHHHHCCHHHHHHHHHHCCCHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8320209 [H]