Definition Kosmotoga olearia TBF 19.5.1, complete genome.
Accession NC_012785
Length 2,302,126

Click here to switch to the map view.

The map label for this gene is yfhP [C]

Identifier: 239616862

GI number: 239616862

Start: 486047

End: 486481

Strand: Direct

Name: yfhP [C]

Synonym: Kole_0457

Alternate gene names: 239616862

Gene position: 486047-486481 (Clockwise)

Preceding gene: 239616861

Following gene: 239616863

Centisome position: 21.11

GC content: 39.08

Gene sequence:

>435_bases
ATGTTGATCCAAAAGACCGTTAGGTATGCTCTGAGGATATTGGTTAAGCTGTCCATCGAGAATAGAGCCTTGAACTCAAA
AGAAATCTCTCTATCCGAAAATCTCGATCACGGTTTTACATTGAAAATTCTCTACTATCTCAAGAAAGCTGGATTGGTTC
GAGCTATTCGCGGTCGAAAAGGTGGATACGCTCTTGCAAAGAATCCCGAAGATATAACCATAACAAAGATATTCGAGGCT
ATACCAGACGTTGAAGAAAGGCTCATCGACTGTGATACCAGCTGCAAATTTCACAAAGAATGCTACGTGAAGGATTTCTG
GGAATTGACAAACCATATCATAGGGTACACCTTTTCAAATGTATCCATCGCCAATATAATCAATAATAATTTCAAGGAAA
AGATCAAGTTCCTGGAAGGGGAATTTCATCAATGA

Upstream 100 bases:

>100_bases
AATCTTCCACAAAAATATTCTCGATTCCATATTTTCGCCTATCCACCTCTGATATATAATCAAGATAGGGGGGCAATAAT
GTTGATGATAGGGGGGGATA

Downstream 100 bases:

>100_bases
AGTCTAAGAGTGTGAACAAATATCAGCTTGCAAAACAATTTCAGTTGCTGGCAAGGCTTCTAGAAGTCCTTAAGGAGAAT
CCCTTCAAAATAAGGACCTA

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; BadM/Rrf2 Family Transcriptional Regulator; Rrf2 Family Protein

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MLIQKTVRYALRILVKLSIENRALNSKEISLSENLDHGFTLKILYYLKKAGLVRAIRGRKGGYALAKNPEDITITKIFEA
IPDVEERLIDCDTSCKFHKECYVKDFWELTNHIIGYTFSNVSIANIINNNFKEKIKFLEGEFHQ

Sequences:

>Translated_144_residues
MLIQKTVRYALRILVKLSIENRALNSKEISLSENLDHGFTLKILYYLKKAGLVRAIRGRKGGYALAKNPEDITITKIFEA
IPDVEERLIDCDTSCKFHKECYVKDFWELTNHIIGYTFSNVSIANIINNNFKEKIKFLEGEFHQ
>Mature_144_residues
MLIQKTVRYALRILVKLSIENRALNSKEISLSENLDHGFTLKILYYLKKAGLVRAIRGRKGGYALAKNPEDITITKIFEA
IPDVEERLIDCDTSCKFHKECYVKDFWELTNHIIGYTFSNVSIANIINNNFKEKIKFLEGEFHQ

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16699; Mature: 16699

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIQKTVRYALRILVKLSIENRALNSKEISLSENLDHGFTLKILYYLKKAGLVRAIRGRK
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
GGYALAKNPEDITITKIFEAIPDVEERLIDCDTSCKFHKECYVKDFWELTNHIIGYTFSN
CCEEECCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCEEECC
VSIANIINNNFKEKIKFLEGEFHQ
EEHHHHHHCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MLIQKTVRYALRILVKLSIENRALNSKEISLSENLDHGFTLKILYYLKKAGLVRAIRGRK
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
GGYALAKNPEDITITKIFEAIPDVEERLIDCDTSCKFHKECYVKDFWELTNHIIGYTFSN
CCEEECCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCEEECC
VSIANIINNNFKEKIKFLEGEFHQ
EEHHHHHHCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA