| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is yfhP [C]
Identifier: 239616862
GI number: 239616862
Start: 486047
End: 486481
Strand: Direct
Name: yfhP [C]
Synonym: Kole_0457
Alternate gene names: 239616862
Gene position: 486047-486481 (Clockwise)
Preceding gene: 239616861
Following gene: 239616863
Centisome position: 21.11
GC content: 39.08
Gene sequence:
>435_bases ATGTTGATCCAAAAGACCGTTAGGTATGCTCTGAGGATATTGGTTAAGCTGTCCATCGAGAATAGAGCCTTGAACTCAAA AGAAATCTCTCTATCCGAAAATCTCGATCACGGTTTTACATTGAAAATTCTCTACTATCTCAAGAAAGCTGGATTGGTTC GAGCTATTCGCGGTCGAAAAGGTGGATACGCTCTTGCAAAGAATCCCGAAGATATAACCATAACAAAGATATTCGAGGCT ATACCAGACGTTGAAGAAAGGCTCATCGACTGTGATACCAGCTGCAAATTTCACAAAGAATGCTACGTGAAGGATTTCTG GGAATTGACAAACCATATCATAGGGTACACCTTTTCAAATGTATCCATCGCCAATATAATCAATAATAATTTCAAGGAAA AGATCAAGTTCCTGGAAGGGGAATTTCATCAATGA
Upstream 100 bases:
>100_bases AATCTTCCACAAAAATATTCTCGATTCCATATTTTCGCCTATCCACCTCTGATATATAATCAAGATAGGGGGGCAATAAT GTTGATGATAGGGGGGGATA
Downstream 100 bases:
>100_bases AGTCTAAGAGTGTGAACAAATATCAGCTTGCAAAACAATTTCAGTTGCTGGCAAGGCTTCTAGAAGTCCTTAAGGAGAAT CCCTTCAAAATAAGGACCTA
Product: BadM/Rrf2 family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; BadM/Rrf2 Family Transcriptional Regulator; Rrf2 Family Protein
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MLIQKTVRYALRILVKLSIENRALNSKEISLSENLDHGFTLKILYYLKKAGLVRAIRGRKGGYALAKNPEDITITKIFEA IPDVEERLIDCDTSCKFHKECYVKDFWELTNHIIGYTFSNVSIANIINNNFKEKIKFLEGEFHQ
Sequences:
>Translated_144_residues MLIQKTVRYALRILVKLSIENRALNSKEISLSENLDHGFTLKILYYLKKAGLVRAIRGRKGGYALAKNPEDITITKIFEA IPDVEERLIDCDTSCKFHKECYVKDFWELTNHIIGYTFSNVSIANIINNNFKEKIKFLEGEFHQ >Mature_144_residues MLIQKTVRYALRILVKLSIENRALNSKEISLSENLDHGFTLKILYYLKKAGLVRAIRGRKGGYALAKNPEDITITKIFEA IPDVEERLIDCDTSCKFHKECYVKDFWELTNHIIGYTFSNVSIANIINNNFKEKIKFLEGEFHQ
Specific function: Unknown
COG id: COG1959
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16699; Mature: 16699
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: PS01332 UPF0074
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIQKTVRYALRILVKLSIENRALNSKEISLSENLDHGFTLKILYYLKKAGLVRAIRGRK CCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC GGYALAKNPEDITITKIFEAIPDVEERLIDCDTSCKFHKECYVKDFWELTNHIIGYTFSN CCEEECCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCEEECC VSIANIINNNFKEKIKFLEGEFHQ EEHHHHHHCCHHHHHHHHCCCCCC >Mature Secondary Structure MLIQKTVRYALRILVKLSIENRALNSKEISLSENLDHGFTLKILYYLKKAGLVRAIRGRK CCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC GGYALAKNPEDITITKIFEAIPDVEERLIDCDTSCKFHKECYVKDFWELTNHIIGYTFSN CCEEECCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCEEECC VSIANIINNNFKEKIKFLEGEFHQ EEHHHHHHCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA