| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is yvqK [H]
Identifier: 239616851
GI number: 239616851
Start: 475543
End: 476067
Strand: Direct
Name: yvqK [H]
Synonym: Kole_0446
Alternate gene names: 239616851
Gene position: 475543-476067 (Clockwise)
Preceding gene: 239616850
Following gene: 239616854
Centisome position: 20.66
GC content: 37.71
Gene sequence:
>525_bases ATGAGTATATCCACAGGTGGAGGAGATAAAGGTGAAACCAGCCTCTGGTCTGGCGAAAGGGTATCTAAAGATGATTTACG TGTTGAAGCATACGGAACGATAGATGAATTGAATTCACATATCGGTGAAGCCAGGCATTACTGTAAATCAAAAGAAACCA AGGAACTTCTTTTAAGAATTCAAAATGACCTTTTCAAAGTGGCGGGGCAACTGGCTTCTAAAGGTAAATTATTCATCGAA CCAATAACTGAAACCGATGTTCAATGGCTAACAGAAAAAGTGCACCACTATGAAAAAATCATCAAATTAAAAGGTTTCGT TATCTCGGGAACGACAATTCAATCTGCAAAATTAGATATATGCCGAACAGTAGCAAGAAGAGCAGAAAGAAGAATTGTCA GTCTGTGTAAGACTGAAGAGATCGCCAATGAACTTTTGAAATATATGAACAGATTATCGGATTTCCTATTCATTTTGGCT CGTTTTGAGGAGCACCTTGAAGGAAAACTTACATACAAAAGGTGA
Upstream 100 bases:
>100_bases AAGGTTTAGAAAAGAGACGCACAACCCACAACTCTTTTTCTCGGATTCTCGGCTCTCGGTTCTCGAACTCTCGATTTTTG GTTCCAAAGGAGGAATACCT
Downstream 100 bases:
>100_bases AATACATACGTATCGGGTCCCAATATTTTTCAAACAGTCAGATTCTCATTTCTCTTCAATTTTCAAGGGACTGACTTTAT TCTCAAGTGGAACATCTTCC
Product: ATP/cobalamin adenosyltransferase
Products: NA
Alternate protein names: Cob(I)alamin adenosyltransferase [H]
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MSISTGGGDKGETSLWSGERVSKDDLRVEAYGTIDELNSHIGEARHYCKSKETKELLLRIQNDLFKVAGQLASKGKLFIE PITETDVQWLTEKVHHYEKIIKLKGFVISGTTIQSAKLDICRTVARRAERRIVSLCKTEEIANELLKYMNRLSDFLFILA RFEEHLEGKLTYKR
Sequences:
>Translated_174_residues MSISTGGGDKGETSLWSGERVSKDDLRVEAYGTIDELNSHIGEARHYCKSKETKELLLRIQNDLFKVAGQLASKGKLFIE PITETDVQWLTEKVHHYEKIIKLKGFVISGTTIQSAKLDICRTVARRAERRIVSLCKTEEIANELLKYMNRLSDFLFILA RFEEHLEGKLTYKR >Mature_173_residues SISTGGGDKGETSLWSGERVSKDDLRVEAYGTIDELNSHIGEARHYCKSKETKELLLRIQNDLFKVAGQLASKGKLFIEP ITETDVQWLTEKVHHYEKIIKLKGFVISGTTIQSAKLDICRTVARRAERRIVSLCKTEEIANELLKYMNRLSDFLFILAR FEEHLEGKLTYKR
Specific function: Unknown
COG id: COG2096
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI16418349, Length=180, Percent_Identity=40, Blast_Score=97, Evalue=9e-21, Organism=Caenorhabditis elegans, GI115534154, Length=167, Percent_Identity=35.9281437125749, Blast_Score=95, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017858 - InterPro: IPR002779 - InterPro: IPR016030 - ProDom: PD007457 [H]
Pfam domain/function: PF01923 Cob_adeno_trans [H]
EC number: =2.5.1.17 [H]
Molecular weight: Translated: 19934; Mature: 19803
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISTGGGDKGETSLWSGERVSKDDLRVEAYGTIDELNSHIGEARHYCKSKETKELLLRI CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHH QNDLFKVAGQLASKGKLFIEPITETDVQWLTEKVHHYEKIIKLKGFVISGTTIQSAKLDI HHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHH CRTVARRAERRIVSLCKTEEIANELLKYMNRLSDFLFILARFEEHLEGKLTYKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SISTGGGDKGETSLWSGERVSKDDLRVEAYGTIDELNSHIGEARHYCKSKETKELLLRI CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHH QNDLFKVAGQLASKGKLFIEPITETDVQWLTEKVHHYEKIIKLKGFVISGTTIQSAKLDI HHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHH CRTVARRAERRIVSLCKTEEIANELLKYMNRLSDFLFILARFEEHLEGKLTYKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]