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The map label for this gene is ybgI [C]

Identifier: 239616821

GI number: 239616821

Start: 437700

End: 438431

Strand: Direct

Name: ybgI [C]

Synonym: Kole_0414

Alternate gene names: 239616821

Gene position: 437700-438431 (Clockwise)

Preceding gene: 239616818

Following gene: 239616828

Centisome position: 19.01

GC content: 39.62

Gene sequence:

>732_bases
ATGAAAATTTTTGAAATCGAAAATTATCTAAATGAGATTCTGGAACCATGGAATTACACCGATTACTGTTATAACGGAAT
ACAAATCGAAGGAAGGCACGAGGTAAAAAAGGTAGCTGTTGGCGTTTCCTTTAACAAAGCTTTTATCGACCATGCTCTCG
AAGAAAGGGTTGACATGCTCCTTGTACACCATGGGATATTTGGAAGTGGTTTCTTTTCACTCAAAGGATATATAAAACGC
AGGGTTGAGAAGGTCATCAAGAACGATCTAACCCTCATGGGCTATCATCTTCCGTTAGATGCTCACCGGGAATACGGTAA
CAATGCAACCATATTGAAACTTCTCGGTCTCGAACCCGGTGAACAGGTTGAAGTCGGATACATTGGTGAGTACGAAGAAG
CAGTCTCATTTGATGATTTTTATAAGAGATTAAAGCAAATTTTCCCGAACCAACCGATATTAAAATACGTGAATTCTGAT
TTTGTAAAAAAAGTTTGCGTGATTTCCGGTGGTGCAGCAGGTGACCTCAGAAAGGTTGAAGGAAAAGTTGATACATTTAT
TACTGGCGAAGTGAAAGAACAGACAAGAGATGAAGCCAGAGAAATGGGAATCAATTTTATCAACGCGGGGCATTACGCCA
CAGAAACCTTCGGCGTTAAAAATCTTGGAAAGCTCCTCGAAGAAAACTTAGGTCTGGAAGTAGTTTTTATAGATGTTTGG
AATGAGGTCTAA

Upstream 100 bases:

>100_bases
ATTTGCTTAAAACTCCTTTAGAAAACACTTAGAAAAAATGCTTTTTCTTTGTTGCTCCTGTATAATTCCTTTGACAACGT
TTGTTCAGGAGGGATGGAAC

Downstream 100 bases:

>100_bases
ACCGAGAATCTGAGAGTTCGAGAAAAAACAAGACGCTTGCAAGGCTGTCAGCTGATGGAGCGACGCTTGCGAAGGCAGCA
AGAACAAAAGGACGGGTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MKIFEIENYLNEILEPWNYTDYCYNGIQIEGRHEVKKVAVGVSFNKAFIDHALEERVDMLLVHHGIFGSGFFSLKGYIKR
RVEKVIKNDLTLMGYHLPLDAHREYGNNATILKLLGLEPGEQVEVGYIGEYEEAVSFDDFYKRLKQIFPNQPILKYVNSD
FVKKVCVISGGAAGDLRKVEGKVDTFITGEVKEQTRDEAREMGINFINAGHYATETFGVKNLGKLLEENLGLEVVFIDVW
NEV

Sequences:

>Translated_243_residues
MKIFEIENYLNEILEPWNYTDYCYNGIQIEGRHEVKKVAVGVSFNKAFIDHALEERVDMLLVHHGIFGSGFFSLKGYIKR
RVEKVIKNDLTLMGYHLPLDAHREYGNNATILKLLGLEPGEQVEVGYIGEYEEAVSFDDFYKRLKQIFPNQPILKYVNSD
FVKKVCVISGGAAGDLRKVEGKVDTFITGEVKEQTRDEAREMGINFINAGHYATETFGVKNLGKLLEENLGLEVVFIDVW
NEV
>Mature_243_residues
MKIFEIENYLNEILEPWNYTDYCYNGIQIEGRHEVKKVAVGVSFNKAFIDHALEERVDMLLVHHGIFGSGFFSLKGYIKR
RVEKVIKNDLTLMGYHLPLDAHREYGNNATILKLLGLEPGEQVEVGYIGEYEEAVSFDDFYKRLKQIFPNQPILKYVNSD
FVKKVCVISGGAAGDLRKVEGKVDTFITGEVKEQTRDEAREMGINFINAGHYATETFGVKNLGKLLEENLGLEVVFIDVW
NEV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=247, Percent_Identity=37.246963562753, Blast_Score=157, Evalue=9e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27749; Mature: 27749

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFEIENYLNEILEPWNYTDYCYNGIQIEGRHEVKKVAVGVSFNKAFIDHALEERVDML
CEEEEHHHHHHHHHCCCCCCHHHCCCEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LVHHGIFGSGFFSLKGYIKRRVEKVIKNDLTLMGYHLPLDAHREYGNNATILKLLGLEPG
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCEEEEEECCCCC
EQVEVGYIGEYEEAVSFDDFYKRLKQIFPNQPILKYVNSDFVKKVCVISGGAAGDLRKVE
CEEEEEECCCHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHC
GKVDTFITGEVKEQTRDEAREMGINFINAGHYATETFGVKNLGKLLEENLGLEVVFIDVW
CCCCEEEECHHHHHHHHHHHHHCCEEEECCCCHHHHHCHHHHHHHHHHCCCEEEEEEEEC
NEV
CCC
>Mature Secondary Structure
MKIFEIENYLNEILEPWNYTDYCYNGIQIEGRHEVKKVAVGVSFNKAFIDHALEERVDML
CEEEEHHHHHHHHHCCCCCCHHHCCCEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LVHHGIFGSGFFSLKGYIKRRVEKVIKNDLTLMGYHLPLDAHREYGNNATILKLLGLEPG
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCEEEEEECCCCC
EQVEVGYIGEYEEAVSFDDFYKRLKQIFPNQPILKYVNSDFVKKVCVISGGAAGDLRKVE
CEEEEEECCCHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHC
GKVDTFITGEVKEQTRDEAREMGINFINAGHYATETFGVKNLGKLLEENLGLEVVFIDVW
CCCCEEEECHHHHHHHHHHHHHCCEEEECCCCHHHHHCHHHHHHHHHHCCCEEEEEEEEC
NEV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]