| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616797
Identifier: 239616797
GI number: 239616797
Start: 407713
End: 410115
Strand: Direct
Name: 239616797
Synonym: Kole_0390
Alternate gene names: NA
Gene position: 407713-410115 (Clockwise)
Preceding gene: 239616796
Following gene: 239616798
Centisome position: 17.71
GC content: 38.87
Gene sequence:
>2403_bases GTGATCATTATGCAAAAACTAAGCAGATTCGTTTTCACGTATCGCGTACCGATAGTAGTGTTTTTCGTCGTTATATCAGC AATAGGATTCTACCTTTCAACGAATCTTGTGGTTGATTCTGATCTCCTGAAGTTACTTCCACGGGAAAGCGACGTTGTGA AAAGATACGAGAATTTTGTTAAGTGGAGTAGTACAGACGATGTTACCTTTATAGTTTTAAAAACCAACAACAAAACCCAA AAAGGGCTTGACGAACTAAAAGCAGCTGCCAAAAAGCTGTATCAGGATTCTTACACCTTTCCACATATAGAAGACTTTAT TAGATTCGATCTATTATCAAACCTTGGTGCTCTGAGCCTCGTTCTGGTCGATCCTTCGGTTCTTAAAGAGCTATCTCCCG AAGAATTTGATTTTTCTGATGAGTTTAAACGCCTGGTGAACTACGACTTTTCGGCTATTCACGATATCGGTATCGCTTTC TCCGAAACATTACAGTTAAAGGATAAGATTTTGAGTGATTCCACAACGACCTTTGAAAGTTTTGTAAGGATACCATCAGA ATTTCCTGAAAATGACCCCATGATCCTTGTCATGGGGATCAAGCTTGATGGTCCTTCATCTGATGTTGATTACGTTGATC TGGTTATACCTCAATTGAGAAAATGGGTGAAGAGTGAAATAAGTGAATACAATATAAGCTTTAACCTGACAGGGGATCAC CAAGCAACCTATGAGTCACATAAACAGGCAAGCAGAGATTTTATGGTCACTACAATAGTGTCTTTGATCGGTATCGCCTT GCTTTTTTATCTGGCCTATTCAAGCTTTAAAGTTACTATGTACATCTTTATCTCACTTGCCACATCTATGTTTACCACAC TCGGGCTCGCATTTTTGATATTCGGAAGATTGAACATAGTCACGACGTTCGTAAACGCTATAACTCTCGGTTTGGGTATT GACTATGGAATTCACATAATAACAAGATTATCGGATGAAGTAAAACGGCGCAGAGACCCTGTGCTCTCGTTGAAGCATAC CTACTACGCTGTCACCAAACCTCTCCTGGTAAGCCTTTTGACAACGATCTTGGTCTTTATTCTTTTAGCTATTATAGATT CTCCAGCCATTAGAGAACTCGGTATTTTAACCTCCGTTGGGCTTTTCGTGTTTTTTATTACCATGTATATCTTTTTACCG GCACTATCAATCGGTTCTTTTTTGAAACCAGGTAAAGTAATGAAGATTCACTCTCTCGATCGATTCTTCTATGCTACCTC TGCAGTTGTAAAACGATATTCCATGATATCCTTAAGCATTATAGTTACAATCTTATTGATCTTCAGTTATATAGGATTTG TCAGTATTTCAAATTTCTCCTATACCCCGCCTGGATTGATGTCCGAAGAATCTGAAATGCTGAGCACTTTGCACCTTCTT GAGCGGGTCTTCAAAGCCGATGTCACCAATTCTGTACCAATACTGGCAGACAATATAGAACAAGTGGAGGAAATCTCGCG AATTCTCGATGAAAATGAATACGTCGAGGGAAGCTTTTCCATCCTTACCATATTTAAAGAAGATAGTGATGAATACATGA AGCAGTTTAAAGAAGTGGTTCGAACGCTGGATAGATTCAGAGGGAATCCTTTAATGGAAGCATTCCTGAAAAAAGCAAAT TATTATGACGAACTCTTTGTGCTGTTAGACGAATCCGAAAAGATCGAATCTGGAAAAGAATTGATAGACTTTATCTCTGA GACACTCCCGGAATCTCTCAAAAAGCAATTCATATATCTCTCTCCTGACGGGAAAAAATATTACATAGTTACTGCGTATC CCGCAGCACATCTTTATTCCAGTAACTTCATCAAACGTTTCTTTGATAGCCTTGGGGAGCTGGTAGAAAGAGTAGAGGGT TATCCAAGAATCTTTTATTACATAATGGATATCATAAAGAAAGTGTCTTTACCGGTTTCTGGTGTTGCGATATTGCTTGT TTTTCTGATTGTATCTTTAGAAAGAAAGAATATTTTCGACGGATTGAAAGTTACCTTTTTGATGATAGGCATTTTACTTT CAATGTTCGGTATCATGAATCTAATTGGAATTAAAACCACCTTTATAACTATAATCACCGCTCCACTGATTATCGGTATT GGAGTCGATTCCCTGGTTCACATGATCCACTCTTCTACAACGTACAATCTTTTTGAAGCCGGGCGTACACTGAAATCAGT AACAATGTCTTCAGCTACAACAATGCTCGCATTCTTCAGTTTTTCTCTGGCCGAAGGTAGACTATTGAGAAACTTCGGTT TGACTCTAACCGTTGGGGTTTTCCTTGCCTTGCTGGTTGCAGCCTTTGCTATTCCTGTGCTACCATGGAATAAAGAACGT TGA
Upstream 100 bases:
>100_bases TTAAACTCAATACAAAAGCCGATATGACGAAATCTCTCATGACAATGCTAATATTTAAAAGCCTCAGGGTGATATCAATC CTCTGGCTTATTTTTCTGTG
Downstream 100 bases:
>100_bases ATGGAGGGTTAGAATATGCCTTTACACCTGCTTGTTGCTTATCTTGTTGCCGACCACGCTTTCGTAAACAATTATAAGCT TGGTGATTTAGCAAAAACCG
Product: exporter of the RND superfamily protein-like protein
Products: NA
Alternate protein names: RND Superfamily Exporter; rRNA Methylase; Mfs Transporter; Export Protein; Exporter Of RND Superfamily Protein; Phospholipid/Glycerol Acyltransferase; MFS Family Transporter; RND Efflux Transporter
Number of amino acids: Translated: 800; Mature: 800
Protein sequence:
>800_residues MIIMQKLSRFVFTYRVPIVVFFVVISAIGFYLSTNLVVDSDLLKLLPRESDVVKRYENFVKWSSTDDVTFIVLKTNNKTQ KGLDELKAAAKKLYQDSYTFPHIEDFIRFDLLSNLGALSLVLVDPSVLKELSPEEFDFSDEFKRLVNYDFSAIHDIGIAF SETLQLKDKILSDSTTTFESFVRIPSEFPENDPMILVMGIKLDGPSSDVDYVDLVIPQLRKWVKSEISEYNISFNLTGDH QATYESHKQASRDFMVTTIVSLIGIALLFYLAYSSFKVTMYIFISLATSMFTTLGLAFLIFGRLNIVTTFVNAITLGLGI DYGIHIITRLSDEVKRRRDPVLSLKHTYYAVTKPLLVSLLTTILVFILLAIIDSPAIRELGILTSVGLFVFFITMYIFLP ALSIGSFLKPGKVMKIHSLDRFFYATSAVVKRYSMISLSIIVTILLIFSYIGFVSISNFSYTPPGLMSEESEMLSTLHLL ERVFKADVTNSVPILADNIEQVEEISRILDENEYVEGSFSILTIFKEDSDEYMKQFKEVVRTLDRFRGNPLMEAFLKKAN YYDELFVLLDESEKIESGKELIDFISETLPESLKKQFIYLSPDGKKYYIVTAYPAAHLYSSNFIKRFFDSLGELVERVEG YPRIFYYIMDIIKKVSLPVSGVAILLVFLIVSLERKNIFDGLKVTFLMIGILLSMFGIMNLIGIKTTFITIITAPLIIGI GVDSLVHMIHSSTTYNLFEAGRTLKSVTMSSATTMLAFFSFSLAEGRLLRNFGLTLTVGVFLALLVAAFAIPVLPWNKER
Sequences:
>Translated_800_residues MIIMQKLSRFVFTYRVPIVVFFVVISAIGFYLSTNLVVDSDLLKLLPRESDVVKRYENFVKWSSTDDVTFIVLKTNNKTQ KGLDELKAAAKKLYQDSYTFPHIEDFIRFDLLSNLGALSLVLVDPSVLKELSPEEFDFSDEFKRLVNYDFSAIHDIGIAF SETLQLKDKILSDSTTTFESFVRIPSEFPENDPMILVMGIKLDGPSSDVDYVDLVIPQLRKWVKSEISEYNISFNLTGDH QATYESHKQASRDFMVTTIVSLIGIALLFYLAYSSFKVTMYIFISLATSMFTTLGLAFLIFGRLNIVTTFVNAITLGLGI DYGIHIITRLSDEVKRRRDPVLSLKHTYYAVTKPLLVSLLTTILVFILLAIIDSPAIRELGILTSVGLFVFFITMYIFLP ALSIGSFLKPGKVMKIHSLDRFFYATSAVVKRYSMISLSIIVTILLIFSYIGFVSISNFSYTPPGLMSEESEMLSTLHLL ERVFKADVTNSVPILADNIEQVEEISRILDENEYVEGSFSILTIFKEDSDEYMKQFKEVVRTLDRFRGNPLMEAFLKKAN YYDELFVLLDESEKIESGKELIDFISETLPESLKKQFIYLSPDGKKYYIVTAYPAAHLYSSNFIKRFFDSLGELVERVEG YPRIFYYIMDIIKKVSLPVSGVAILLVFLIVSLERKNIFDGLKVTFLMIGILLSMFGIMNLIGIKTTFITIITAPLIIGI GVDSLVHMIHSSTTYNLFEAGRTLKSVTMSSATTMLAFFSFSLAEGRLLRNFGLTLTVGVFLALLVAAFAIPVLPWNKER >Mature_800_residues MIIMQKLSRFVFTYRVPIVVFFVVISAIGFYLSTNLVVDSDLLKLLPRESDVVKRYENFVKWSSTDDVTFIVLKTNNKTQ KGLDELKAAAKKLYQDSYTFPHIEDFIRFDLLSNLGALSLVLVDPSVLKELSPEEFDFSDEFKRLVNYDFSAIHDIGIAF SETLQLKDKILSDSTTTFESFVRIPSEFPENDPMILVMGIKLDGPSSDVDYVDLVIPQLRKWVKSEISEYNISFNLTGDH QATYESHKQASRDFMVTTIVSLIGIALLFYLAYSSFKVTMYIFISLATSMFTTLGLAFLIFGRLNIVTTFVNAITLGLGI DYGIHIITRLSDEVKRRRDPVLSLKHTYYAVTKPLLVSLLTTILVFILLAIIDSPAIRELGILTSVGLFVFFITMYIFLP ALSIGSFLKPGKVMKIHSLDRFFYATSAVVKRYSMISLSIIVTILLIFSYIGFVSISNFSYTPPGLMSEESEMLSTLHLL ERVFKADVTNSVPILADNIEQVEEISRILDENEYVEGSFSILTIFKEDSDEYMKQFKEVVRTLDRFRGNPLMEAFLKKAN YYDELFVLLDESEKIESGKELIDFISETLPESLKKQFIYLSPDGKKYYIVTAYPAAHLYSSNFIKRFFDSLGELVERVEG YPRIFYYIMDIIKKVSLPVSGVAILLVFLIVSLERKNIFDGLKVTFLMIGILLSMFGIMNLIGIKTTFITIITAPLIIGI GVDSLVHMIHSSTTYNLFEAGRTLKSVTMSSATTMLAFFSFSLAEGRLLRNFGLTLTVGVFLALLVAAFAIPVLPWNKER
Specific function: Unknown
COG id: COG4258
COG function: function code R; Predicted exporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90675; Mature: 90675
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIMQKLSRFVFTYRVPIVVFFVVISAIGFYLSTNLVVDSDLLKLLPRESDVVKRYENFV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHCCCCHHHHHHHHHHH KWSSTDDVTFIVLKTNNKTQKGLDELKAAAKKLYQDSYTFPHIEDFIRFDLLSNLGALSL CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEE VLVDPSVLKELSPEEFDFSDEFKRLVNYDFSAIHDIGIAFSETLQLKDKILSDSTTTFES EEECHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH FVRIPSEFPENDPMILVMGIKLDGPSSDVDYVDLVIPQLRKWVKSEISEYNISFNLTGDH HHHCHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC QATYESHKQASRDFMVTTIVSLIGIALLFYLAYSSFKVTMYIFISLATSMFTTLGLAFLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH FGRLNIVTTFVNAITLGLGIDYGIHIITRLSDEVKRRRDPVLSLKHTYYAVTKPLLVSLL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH TTILVFILLAIIDSPAIRELGILTSVGLFVFFITMYIFLPALSIGSFLKPGKVMKIHSLD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHH RFFYATSAVVKRYSMISLSIIVTILLIFSYIGFVSISNFSYTPPGLMSEESEMLSTLHLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHH ERVFKADVTNSVPILADNIEQVEEISRILDENEYVEGSFSILTIFKEDSDEYMKQFKEVV HHHHHHCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHH RTLDRFRGNPLMEAFLKKANYYDELFVLLDESEKIESGKELIDFISETLPESLKKQFIYL HHHHHHCCCHHHHHHHHHCCCHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCEEEE SPDGKKYYIVTAYPAAHLYSSNFIKRFFDSLGELVERVEGYPRIFYYIMDIIKKVSLPVS CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH GVAILLVFLIVSLERKNIFDGLKVTFLMIGILLSMFGIMNLIGIKTTFITIITAPLIIGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GVDSLVHMIHSSTTYNLFEAGRTLKSVTMSSATTMLAFFSFSLAEGRLLRNFGLTLTVGV CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHH FLALLVAAFAIPVLPWNKER HHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIIMQKLSRFVFTYRVPIVVFFVVISAIGFYLSTNLVVDSDLLKLLPRESDVVKRYENFV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHCCCCHHHHHHHHHHH KWSSTDDVTFIVLKTNNKTQKGLDELKAAAKKLYQDSYTFPHIEDFIRFDLLSNLGALSL CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEE VLVDPSVLKELSPEEFDFSDEFKRLVNYDFSAIHDIGIAFSETLQLKDKILSDSTTTFES EEECHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH FVRIPSEFPENDPMILVMGIKLDGPSSDVDYVDLVIPQLRKWVKSEISEYNISFNLTGDH HHHCHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC QATYESHKQASRDFMVTTIVSLIGIALLFYLAYSSFKVTMYIFISLATSMFTTLGLAFLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH FGRLNIVTTFVNAITLGLGIDYGIHIITRLSDEVKRRRDPVLSLKHTYYAVTKPLLVSLL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH TTILVFILLAIIDSPAIRELGILTSVGLFVFFITMYIFLPALSIGSFLKPGKVMKIHSLD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHH RFFYATSAVVKRYSMISLSIIVTILLIFSYIGFVSISNFSYTPPGLMSEESEMLSTLHLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHH ERVFKADVTNSVPILADNIEQVEEISRILDENEYVEGSFSILTIFKEDSDEYMKQFKEVV HHHHHHCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHH RTLDRFRGNPLMEAFLKKANYYDELFVLLDESEKIESGKELIDFISETLPESLKKQFIYL HHHHHHCCCHHHHHHHHHCCCHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCEEEE SPDGKKYYIVTAYPAAHLYSSNFIKRFFDSLGELVERVEGYPRIFYYIMDIIKKVSLPVS CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH GVAILLVFLIVSLERKNIFDGLKVTFLMIGILLSMFGIMNLIGIKTTFITIITAPLIIGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GVDSLVHMIHSSTTYNLFEAGRTLKSVTMSSATTMLAFFSFSLAEGRLLRNFGLTLTVGV CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHH FLALLVAAFAIPVLPWNKER HHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA