Definition Kosmotoga olearia TBF 19.5.1, complete genome.
Accession NC_012785
Length 2,302,126

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The map label for this gene is 239616767

Identifier: 239616767

GI number: 239616767

Start: 378288

End: 380483

Strand: Direct

Name: 239616767

Synonym: Kole_0360

Alternate gene names: NA

Gene position: 378288-380483 (Clockwise)

Preceding gene: 239616766

Following gene: 239616772

Centisome position: 16.43

GC content: 43.44

Gene sequence:

>2196_bases
ATGAGTTTACCACCAAATGAAAGATTGAATGTTGAAGAGATCCTTAAAGATTTAGAACATTACAGACCGCGAAGAAGAGG
CTGGACGTGGAGAAAAAAACTTCCAGAAGGTACAAAAATAGGGGAATTTACTTATGATCAAATAAGTGAACCTTTGAAAA
ATAGCGTTCCCCTACCAGCTGCTCATCATTTTGGAAATATCGATCCTCAACCCGATGTGGTCATAACCTCCGAGATCGCT
TCCGGGAGGTTCGAAGATGATATTCGCAGGATGAGAATGGCGGCGTGGCATGGTGCCGATCATATCATGGTCATACGTAC
GCTTGGCCAGAGCCATATGGATGGTCTCATAGAAGGTACACCTGAAGGTATTGGAGGTGTACCTATTACCAGAAAACAGA
TACGGGCCAGCAGAAAGGCACTGGATATAATTGAAGACGAAGTTGGGCGTCCAATAAACTTTCACAGCTACGTTAGTGGT
GTTGCAGGACCTGAAATCGCTGTGCTTTTTGCCGAAGAAGGTGTGAACGGTGCGCATCAGGATCCCCAATATAATGTACT
TTACAGAGGAATAAACCCGATAAGATCCTTTGTGGATGCTGCGGTTGCGAAAAAAATAATGGCATGGGCAAATATGCTGC
AGATTGACGGGGCTCACAACGCGAACGCCTCCGCCAAAATGGCCTGGAAAGTGATGCCGGAACTTATCGTTCAACATGCG
ATAAACTGTATGTTCTCTTTAAAAGCAGGCATGAAGAAAGAAAACATTGCTCTTTCAACCGTTCCACCAATGGTTTCTCC
AGCCCCCGAATTTAAGCTGAACTTCATTTATGCTCTTACAGTGAGAGAATTGTTCAAAGGATTCCGTTTCAGAGCTCAAA
TGAATACCAGATACATCGAGTCCGACCTCTTTGATGCTACAAGAATACACGTTCTCGATACCCTTATCTCCAGGTTGACC
AGTGCAGATTTGCAATCCACTATCACTCCAGATGAAGGAAGAAATGTGCCGTGGCATATTAATTCCGTAAGAGGTGTTGA
GACAGCAAAACACACGCTTATAGCTCTCGATGGAATAAAAAAATTCCTGAAGGTCAATGAGGAAGAAGTTAGACCCAGAA
TAAGGGAACTAAAAATGCGTGCCATACTCTTTATGGAGGAAATACTGGAAATAGGAGGATATTTTGAAGCGGTAGAACAG
GGCTTTTTTGTTGATAACGGGTACTACCCAGAAAGAATGGGTGATGGAATAGCGAGACCTAAAGATGGTGGAATAGGAGC
CGGTAGTGTTGTTCCGAGAGATCCTGATTACATGGCTCCTGTTTGTGAACATTTCGGTTATAACAACCTCCCCGAAGGTA
TAGAAAAACCATGTGATCTCATCGGTGGTTGTACTTTCCATAACCCTGAAAAAATACAGTTTATCGATGAACTGGACGAA
AACGATAACGTTACTAACAGAATTCAGAAGGTGATAGAAGAAAGAGAAAAGGGCTTCATTGGTCCAGAAGTAGAGTGGTG
GGGTGATGGCTGGATACAGATAGACATGACTATTCCTGATGACGAAGCTCACGCAGAAGCCGCTGCAATTGAAATTTGTA
AACGTTTGGGGTTGGAAGAACCCACAGTGATAAGCAAAACAATCCTTCATCCGGTGGAGGGAACCTATATCGAATTGAAA
GCGCGTGTTCCATTTAAAGTGAACCGAAATGAACTCGAGCTTCCAAAAAAACCCGAAACCCTCCCGGAAGAGGAAATATT
CCAATATGTTTCCAAACACCCAATAAAGGTCGTCGCTGGCACCGCAGGCAATGATGAGCACTCAGTAGGTTTAAGGGAGA
TTTTAGACATAAAACATGGTGGAATAGAAAAATATGGGATCAAGTACACTTACCTCGGTACCAGCGTTCCACCGGAGAAA
TTCATAGACGCTGCAATAGAGACGGGTGCTGATGCTATCCTTGTTTCTTTAATAATCACTCACAACGATGTGCACGTACA
AAACATGAAAAAGATTCATCAACTCGCCATCGAAAAAGGAATCAGGGATAAAATAATTCTCATAGCCGGGGGAACGCAGA
TAAACAACGATCTTGCTGTTAGCTGTGGTATGGACGGCGGATTTGGTCGTGGCACCAAAGGCATTCACGTTGCGAGTTTC
CTTGTAAAAAAACTCAGGGAAAAGCACTCTAATTAA

Upstream 100 bases:

>100_bases
CTCAAAAAACAGGAAAATCCATTCTCGAAGCTGGAAGAGAGCTCGCAGCCGGTAAGTACTGGGACCTTGTTGAAGAGAGT
TTCAAAGGGGTGGGATCAAA

Downstream 100 bases:

>100_bases
AAAATTTAACCTGCTCAATACAAAAAAGCTCCTCACTTTAAGTGAGGAGCTCTTTGTTTTATCTTCAAATAATTACTTCA
CAGAATTCATTATTCTAGAA

Product: D-Lysine 56-aminomutase alpha subunit

Products: NA

Alternate protein names: D-Lysine; D-Lysine 5 6-Aminomutase Alpha Subunit; D-Ornithine Aminomutase E Component; L-Beta-Lysine 5 6-Aminomutase Alpha Subunit; L-Beta-Lysine 5 6-Aminomutase Beta Subunit; D-Lysine 56-Aminomutase Beta Subunit; D-Lysine 56-Aminomutase Alpha Subunit; D-Ornithine 4 5-Aminomutase E Subunit; Beta-Lysine 56-Aminomutase Alpha Subunit; Cobalamin Vitamin; Beta-Lysine 56-Aminomutase Beta Subunit; Lysine 5 6-Aminomutase Alpha Subunit; Methylmalonyl-CoA Mutase C- Domain/Subunit; D-Lysine 5 6-Aminomutase Subunit Beta; D-Lysine 5 6-Aminomutase Beta Subunit; Lysine 5 6-Aminomutase Beta Subunit

Number of amino acids: Translated: 731; Mature: 730

Protein sequence:

>731_residues
MSLPPNERLNVEEILKDLEHYRPRRRGWTWRKKLPEGTKIGEFTYDQISEPLKNSVPLPAAHHFGNIDPQPDVVITSEIA
SGRFEDDIRRMRMAAWHGADHIMVIRTLGQSHMDGLIEGTPEGIGGVPITRKQIRASRKALDIIEDEVGRPINFHSYVSG
VAGPEIAVLFAEEGVNGAHQDPQYNVLYRGINPIRSFVDAAVAKKIMAWANMLQIDGAHNANASAKMAWKVMPELIVQHA
INCMFSLKAGMKKENIALSTVPPMVSPAPEFKLNFIYALTVRELFKGFRFRAQMNTRYIESDLFDATRIHVLDTLISRLT
SADLQSTITPDEGRNVPWHINSVRGVETAKHTLIALDGIKKFLKVNEEEVRPRIRELKMRAILFMEEILEIGGYFEAVEQ
GFFVDNGYYPERMGDGIARPKDGGIGAGSVVPRDPDYMAPVCEHFGYNNLPEGIEKPCDLIGGCTFHNPEKIQFIDELDE
NDNVTNRIQKVIEEREKGFIGPEVEWWGDGWIQIDMTIPDDEAHAEAAAIEICKRLGLEEPTVISKTILHPVEGTYIELK
ARVPFKVNRNELELPKKPETLPEEEIFQYVSKHPIKVVAGTAGNDEHSVGLREILDIKHGGIEKYGIKYTYLGTSVPPEK
FIDAAIETGADAILVSLIITHNDVHVQNMKKIHQLAIEKGIRDKIILIAGGTQINNDLAVSCGMDGGFGRGTKGIHVASF
LVKKLREKHSN

Sequences:

>Translated_731_residues
MSLPPNERLNVEEILKDLEHYRPRRRGWTWRKKLPEGTKIGEFTYDQISEPLKNSVPLPAAHHFGNIDPQPDVVITSEIA
SGRFEDDIRRMRMAAWHGADHIMVIRTLGQSHMDGLIEGTPEGIGGVPITRKQIRASRKALDIIEDEVGRPINFHSYVSG
VAGPEIAVLFAEEGVNGAHQDPQYNVLYRGINPIRSFVDAAVAKKIMAWANMLQIDGAHNANASAKMAWKVMPELIVQHA
INCMFSLKAGMKKENIALSTVPPMVSPAPEFKLNFIYALTVRELFKGFRFRAQMNTRYIESDLFDATRIHVLDTLISRLT
SADLQSTITPDEGRNVPWHINSVRGVETAKHTLIALDGIKKFLKVNEEEVRPRIRELKMRAILFMEEILEIGGYFEAVEQ
GFFVDNGYYPERMGDGIARPKDGGIGAGSVVPRDPDYMAPVCEHFGYNNLPEGIEKPCDLIGGCTFHNPEKIQFIDELDE
NDNVTNRIQKVIEEREKGFIGPEVEWWGDGWIQIDMTIPDDEAHAEAAAIEICKRLGLEEPTVISKTILHPVEGTYIELK
ARVPFKVNRNELELPKKPETLPEEEIFQYVSKHPIKVVAGTAGNDEHSVGLREILDIKHGGIEKYGIKYTYLGTSVPPEK
FIDAAIETGADAILVSLIITHNDVHVQNMKKIHQLAIEKGIRDKIILIAGGTQINNDLAVSCGMDGGFGRGTKGIHVASF
LVKKLREKHSN
>Mature_730_residues
SLPPNERLNVEEILKDLEHYRPRRRGWTWRKKLPEGTKIGEFTYDQISEPLKNSVPLPAAHHFGNIDPQPDVVITSEIAS
GRFEDDIRRMRMAAWHGADHIMVIRTLGQSHMDGLIEGTPEGIGGVPITRKQIRASRKALDIIEDEVGRPINFHSYVSGV
AGPEIAVLFAEEGVNGAHQDPQYNVLYRGINPIRSFVDAAVAKKIMAWANMLQIDGAHNANASAKMAWKVMPELIVQHAI
NCMFSLKAGMKKENIALSTVPPMVSPAPEFKLNFIYALTVRELFKGFRFRAQMNTRYIESDLFDATRIHVLDTLISRLTS
ADLQSTITPDEGRNVPWHINSVRGVETAKHTLIALDGIKKFLKVNEEEVRPRIRELKMRAILFMEEILEIGGYFEAVEQG
FFVDNGYYPERMGDGIARPKDGGIGAGSVVPRDPDYMAPVCEHFGYNNLPEGIEKPCDLIGGCTFHNPEKIQFIDELDEN
DNVTNRIQKVIEEREKGFIGPEVEWWGDGWIQIDMTIPDDEAHAEAAAIEICKRLGLEEPTVISKTILHPVEGTYIELKA
RVPFKVNRNELELPKKPETLPEEEIFQYVSKHPIKVVAGTAGNDEHSVGLREILDIKHGGIEKYGIKYTYLGTSVPPEKF
IDAAIETGADAILVSLIITHNDVHVQNMKKIHQLAIEKGIRDKIILIAGGTQINNDLAVSCGMDGGFGRGTKGIHVASFL
VKKLREKHSN

Specific function: Unknown

COG id: COG5012

COG function: function code R; Predicted cobalamin binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81815; Mature: 81684

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPPNERLNVEEILKDLEHYRPRRRGWTWRKKLPEGTKIGEFTYDQISEPLKNSVPLPA
CCCCCCCCCCHHHHHHHHHHHCHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCC
AHHFGNIDPQPDVVITSEIASGRFEDDIRRMRMAAWHGADHIMVIRTLGQSHMDGLIEGT
HHHCCCCCCCCCEEEEECHHCCCCHHHHHHHHHHHHCCCCCEEEEEHHCHHHHCHHHCCC
PEGIGGVPITRKQIRASRKALDIIEDEVGRPINFHSYVSGVAGPEIAVLFAEEGVNGAHQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCC
DPQYNVLYRGINPIRSFVDAAVAKKIMAWANMLQIDGAHNANASAKMAWKVMPELIVQHA
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHH
INCMFSLKAGMKKENIALSTVPPMVSPAPEFKLNFIYALTVRELFKGFRFRAQMNTRYIE
HHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHEEHHHCHHHHH
SDLFDATRIHVLDTLISRLTSADLQSTITPDEGRNVPWHINSVRGVETAKHTLIALDGIK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHH
KFLKVNEEEVRPRIRELKMRAILFMEEILEIGGYFEAVEQGFFVDNGYYPERMGDGIARP
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEECCCCCHHHHCCCCCCC
KDGGIGAGSVVPRDPDYMAPVCEHFGYNNLPEGIEKPCDLIGGCTFHNPEKIQFIDELDE
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCC
NDNVTNRIQKVIEEREKGFIGPEVEWWGDGWIQIDMTIPDDEAHAEAAAIEICKRLGLEE
CCCHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCC
PTVISKTILHPVEGTYIELKARVPFKVNRNELELPKKPETLPEEEIFQYVSKHPIKVVAG
CCHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEE
TAGNDEHSVGLREILDIKHGGIEKYGIKYTYLGTSVPPEKFIDAAIETGADAILVSLIIT
CCCCCCHHHHHHHHHHHCCCCCCHHCEEEEEECCCCCHHHHHHHHHHCCHHHEEHHHHHH
HNDVHVQNMKKIHQLAIEKGIRDKIILIAGGTQINNDLAVSCGMDGGFGRGTKGIHVASF
CCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCEEEEECCCCCCCCCCCCHHHHHH
LVKKLREKHSN
HHHHHHHHCCC
>Mature Secondary Structure 
SLPPNERLNVEEILKDLEHYRPRRRGWTWRKKLPEGTKIGEFTYDQISEPLKNSVPLPA
CCCCCCCCCHHHHHHHHHHHCHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCC
AHHFGNIDPQPDVVITSEIASGRFEDDIRRMRMAAWHGADHIMVIRTLGQSHMDGLIEGT
HHHCCCCCCCCCEEEEECHHCCCCHHHHHHHHHHHHCCCCCEEEEEHHCHHHHCHHHCCC
PEGIGGVPITRKQIRASRKALDIIEDEVGRPINFHSYVSGVAGPEIAVLFAEEGVNGAHQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCC
DPQYNVLYRGINPIRSFVDAAVAKKIMAWANMLQIDGAHNANASAKMAWKVMPELIVQHA
CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHH
INCMFSLKAGMKKENIALSTVPPMVSPAPEFKLNFIYALTVRELFKGFRFRAQMNTRYIE
HHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHEEHHHCHHHHH
SDLFDATRIHVLDTLISRLTSADLQSTITPDEGRNVPWHINSVRGVETAKHTLIALDGIK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHH
KFLKVNEEEVRPRIRELKMRAILFMEEILEIGGYFEAVEQGFFVDNGYYPERMGDGIARP
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEECCCCCHHHHCCCCCCC
KDGGIGAGSVVPRDPDYMAPVCEHFGYNNLPEGIEKPCDLIGGCTFHNPEKIQFIDELDE
CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCC
NDNVTNRIQKVIEEREKGFIGPEVEWWGDGWIQIDMTIPDDEAHAEAAAIEICKRLGLEE
CCCHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCC
PTVISKTILHPVEGTYIELKARVPFKVNRNELELPKKPETLPEEEIFQYVSKHPIKVVAG
CCHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEE
TAGNDEHSVGLREILDIKHGGIEKYGIKYTYLGTSVPPEKFIDAAIETGADAILVSLIIT
CCCCCCHHHHHHHHHHHCCCCCCHHCEEEEEECCCCCHHHHHHHHHHCCHHHEEHHHHHH
HNDVHVQNMKKIHQLAIEKGIRDKIILIAGGTQINNDLAVSCGMDGGFGRGTKGIHVASF
CCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCEEEEECCCCCCCCCCCCHHHHHH
LVKKLREKHSN
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA