| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616767
Identifier: 239616767
GI number: 239616767
Start: 378288
End: 380483
Strand: Direct
Name: 239616767
Synonym: Kole_0360
Alternate gene names: NA
Gene position: 378288-380483 (Clockwise)
Preceding gene: 239616766
Following gene: 239616772
Centisome position: 16.43
GC content: 43.44
Gene sequence:
>2196_bases ATGAGTTTACCACCAAATGAAAGATTGAATGTTGAAGAGATCCTTAAAGATTTAGAACATTACAGACCGCGAAGAAGAGG CTGGACGTGGAGAAAAAAACTTCCAGAAGGTACAAAAATAGGGGAATTTACTTATGATCAAATAAGTGAACCTTTGAAAA ATAGCGTTCCCCTACCAGCTGCTCATCATTTTGGAAATATCGATCCTCAACCCGATGTGGTCATAACCTCCGAGATCGCT TCCGGGAGGTTCGAAGATGATATTCGCAGGATGAGAATGGCGGCGTGGCATGGTGCCGATCATATCATGGTCATACGTAC GCTTGGCCAGAGCCATATGGATGGTCTCATAGAAGGTACACCTGAAGGTATTGGAGGTGTACCTATTACCAGAAAACAGA TACGGGCCAGCAGAAAGGCACTGGATATAATTGAAGACGAAGTTGGGCGTCCAATAAACTTTCACAGCTACGTTAGTGGT GTTGCAGGACCTGAAATCGCTGTGCTTTTTGCCGAAGAAGGTGTGAACGGTGCGCATCAGGATCCCCAATATAATGTACT TTACAGAGGAATAAACCCGATAAGATCCTTTGTGGATGCTGCGGTTGCGAAAAAAATAATGGCATGGGCAAATATGCTGC AGATTGACGGGGCTCACAACGCGAACGCCTCCGCCAAAATGGCCTGGAAAGTGATGCCGGAACTTATCGTTCAACATGCG ATAAACTGTATGTTCTCTTTAAAAGCAGGCATGAAGAAAGAAAACATTGCTCTTTCAACCGTTCCACCAATGGTTTCTCC AGCCCCCGAATTTAAGCTGAACTTCATTTATGCTCTTACAGTGAGAGAATTGTTCAAAGGATTCCGTTTCAGAGCTCAAA TGAATACCAGATACATCGAGTCCGACCTCTTTGATGCTACAAGAATACACGTTCTCGATACCCTTATCTCCAGGTTGACC AGTGCAGATTTGCAATCCACTATCACTCCAGATGAAGGAAGAAATGTGCCGTGGCATATTAATTCCGTAAGAGGTGTTGA GACAGCAAAACACACGCTTATAGCTCTCGATGGAATAAAAAAATTCCTGAAGGTCAATGAGGAAGAAGTTAGACCCAGAA TAAGGGAACTAAAAATGCGTGCCATACTCTTTATGGAGGAAATACTGGAAATAGGAGGATATTTTGAAGCGGTAGAACAG GGCTTTTTTGTTGATAACGGGTACTACCCAGAAAGAATGGGTGATGGAATAGCGAGACCTAAAGATGGTGGAATAGGAGC CGGTAGTGTTGTTCCGAGAGATCCTGATTACATGGCTCCTGTTTGTGAACATTTCGGTTATAACAACCTCCCCGAAGGTA TAGAAAAACCATGTGATCTCATCGGTGGTTGTACTTTCCATAACCCTGAAAAAATACAGTTTATCGATGAACTGGACGAA AACGATAACGTTACTAACAGAATTCAGAAGGTGATAGAAGAAAGAGAAAAGGGCTTCATTGGTCCAGAAGTAGAGTGGTG GGGTGATGGCTGGATACAGATAGACATGACTATTCCTGATGACGAAGCTCACGCAGAAGCCGCTGCAATTGAAATTTGTA AACGTTTGGGGTTGGAAGAACCCACAGTGATAAGCAAAACAATCCTTCATCCGGTGGAGGGAACCTATATCGAATTGAAA GCGCGTGTTCCATTTAAAGTGAACCGAAATGAACTCGAGCTTCCAAAAAAACCCGAAACCCTCCCGGAAGAGGAAATATT CCAATATGTTTCCAAACACCCAATAAAGGTCGTCGCTGGCACCGCAGGCAATGATGAGCACTCAGTAGGTTTAAGGGAGA TTTTAGACATAAAACATGGTGGAATAGAAAAATATGGGATCAAGTACACTTACCTCGGTACCAGCGTTCCACCGGAGAAA TTCATAGACGCTGCAATAGAGACGGGTGCTGATGCTATCCTTGTTTCTTTAATAATCACTCACAACGATGTGCACGTACA AAACATGAAAAAGATTCATCAACTCGCCATCGAAAAAGGAATCAGGGATAAAATAATTCTCATAGCCGGGGGAACGCAGA TAAACAACGATCTTGCTGTTAGCTGTGGTATGGACGGCGGATTTGGTCGTGGCACCAAAGGCATTCACGTTGCGAGTTTC CTTGTAAAAAAACTCAGGGAAAAGCACTCTAATTAA
Upstream 100 bases:
>100_bases CTCAAAAAACAGGAAAATCCATTCTCGAAGCTGGAAGAGAGCTCGCAGCCGGTAAGTACTGGGACCTTGTTGAAGAGAGT TTCAAAGGGGTGGGATCAAA
Downstream 100 bases:
>100_bases AAAATTTAACCTGCTCAATACAAAAAAGCTCCTCACTTTAAGTGAGGAGCTCTTTGTTTTATCTTCAAATAATTACTTCA CAGAATTCATTATTCTAGAA
Product: D-Lysine 56-aminomutase alpha subunit
Products: NA
Alternate protein names: D-Lysine; D-Lysine 5 6-Aminomutase Alpha Subunit; D-Ornithine Aminomutase E Component; L-Beta-Lysine 5 6-Aminomutase Alpha Subunit; L-Beta-Lysine 5 6-Aminomutase Beta Subunit; D-Lysine 56-Aminomutase Beta Subunit; D-Lysine 56-Aminomutase Alpha Subunit; D-Ornithine 4 5-Aminomutase E Subunit; Beta-Lysine 56-Aminomutase Alpha Subunit; Cobalamin Vitamin; Beta-Lysine 56-Aminomutase Beta Subunit; Lysine 5 6-Aminomutase Alpha Subunit; Methylmalonyl-CoA Mutase C- Domain/Subunit; D-Lysine 5 6-Aminomutase Subunit Beta; D-Lysine 5 6-Aminomutase Beta Subunit; Lysine 5 6-Aminomutase Beta Subunit
Number of amino acids: Translated: 731; Mature: 730
Protein sequence:
>731_residues MSLPPNERLNVEEILKDLEHYRPRRRGWTWRKKLPEGTKIGEFTYDQISEPLKNSVPLPAAHHFGNIDPQPDVVITSEIA SGRFEDDIRRMRMAAWHGADHIMVIRTLGQSHMDGLIEGTPEGIGGVPITRKQIRASRKALDIIEDEVGRPINFHSYVSG VAGPEIAVLFAEEGVNGAHQDPQYNVLYRGINPIRSFVDAAVAKKIMAWANMLQIDGAHNANASAKMAWKVMPELIVQHA INCMFSLKAGMKKENIALSTVPPMVSPAPEFKLNFIYALTVRELFKGFRFRAQMNTRYIESDLFDATRIHVLDTLISRLT SADLQSTITPDEGRNVPWHINSVRGVETAKHTLIALDGIKKFLKVNEEEVRPRIRELKMRAILFMEEILEIGGYFEAVEQ GFFVDNGYYPERMGDGIARPKDGGIGAGSVVPRDPDYMAPVCEHFGYNNLPEGIEKPCDLIGGCTFHNPEKIQFIDELDE NDNVTNRIQKVIEEREKGFIGPEVEWWGDGWIQIDMTIPDDEAHAEAAAIEICKRLGLEEPTVISKTILHPVEGTYIELK ARVPFKVNRNELELPKKPETLPEEEIFQYVSKHPIKVVAGTAGNDEHSVGLREILDIKHGGIEKYGIKYTYLGTSVPPEK FIDAAIETGADAILVSLIITHNDVHVQNMKKIHQLAIEKGIRDKIILIAGGTQINNDLAVSCGMDGGFGRGTKGIHVASF LVKKLREKHSN
Sequences:
>Translated_731_residues MSLPPNERLNVEEILKDLEHYRPRRRGWTWRKKLPEGTKIGEFTYDQISEPLKNSVPLPAAHHFGNIDPQPDVVITSEIA SGRFEDDIRRMRMAAWHGADHIMVIRTLGQSHMDGLIEGTPEGIGGVPITRKQIRASRKALDIIEDEVGRPINFHSYVSG VAGPEIAVLFAEEGVNGAHQDPQYNVLYRGINPIRSFVDAAVAKKIMAWANMLQIDGAHNANASAKMAWKVMPELIVQHA INCMFSLKAGMKKENIALSTVPPMVSPAPEFKLNFIYALTVRELFKGFRFRAQMNTRYIESDLFDATRIHVLDTLISRLT SADLQSTITPDEGRNVPWHINSVRGVETAKHTLIALDGIKKFLKVNEEEVRPRIRELKMRAILFMEEILEIGGYFEAVEQ GFFVDNGYYPERMGDGIARPKDGGIGAGSVVPRDPDYMAPVCEHFGYNNLPEGIEKPCDLIGGCTFHNPEKIQFIDELDE NDNVTNRIQKVIEEREKGFIGPEVEWWGDGWIQIDMTIPDDEAHAEAAAIEICKRLGLEEPTVISKTILHPVEGTYIELK ARVPFKVNRNELELPKKPETLPEEEIFQYVSKHPIKVVAGTAGNDEHSVGLREILDIKHGGIEKYGIKYTYLGTSVPPEK FIDAAIETGADAILVSLIITHNDVHVQNMKKIHQLAIEKGIRDKIILIAGGTQINNDLAVSCGMDGGFGRGTKGIHVASF LVKKLREKHSN >Mature_730_residues SLPPNERLNVEEILKDLEHYRPRRRGWTWRKKLPEGTKIGEFTYDQISEPLKNSVPLPAAHHFGNIDPQPDVVITSEIAS GRFEDDIRRMRMAAWHGADHIMVIRTLGQSHMDGLIEGTPEGIGGVPITRKQIRASRKALDIIEDEVGRPINFHSYVSGV AGPEIAVLFAEEGVNGAHQDPQYNVLYRGINPIRSFVDAAVAKKIMAWANMLQIDGAHNANASAKMAWKVMPELIVQHAI NCMFSLKAGMKKENIALSTVPPMVSPAPEFKLNFIYALTVRELFKGFRFRAQMNTRYIESDLFDATRIHVLDTLISRLTS ADLQSTITPDEGRNVPWHINSVRGVETAKHTLIALDGIKKFLKVNEEEVRPRIRELKMRAILFMEEILEIGGYFEAVEQG FFVDNGYYPERMGDGIARPKDGGIGAGSVVPRDPDYMAPVCEHFGYNNLPEGIEKPCDLIGGCTFHNPEKIQFIDELDEN DNVTNRIQKVIEEREKGFIGPEVEWWGDGWIQIDMTIPDDEAHAEAAAIEICKRLGLEEPTVISKTILHPVEGTYIELKA RVPFKVNRNELELPKKPETLPEEEIFQYVSKHPIKVVAGTAGNDEHSVGLREILDIKHGGIEKYGIKYTYLGTSVPPEKF IDAAIETGADAILVSLIITHNDVHVQNMKKIHQLAIEKGIRDKIILIAGGTQINNDLAVSCGMDGGFGRGTKGIHVASFL VKKLREKHSN
Specific function: Unknown
COG id: COG5012
COG function: function code R; Predicted cobalamin binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81815; Mature: 81684
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPPNERLNVEEILKDLEHYRPRRRGWTWRKKLPEGTKIGEFTYDQISEPLKNSVPLPA CCCCCCCCCCHHHHHHHHHHHCHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCC AHHFGNIDPQPDVVITSEIASGRFEDDIRRMRMAAWHGADHIMVIRTLGQSHMDGLIEGT HHHCCCCCCCCCEEEEECHHCCCCHHHHHHHHHHHHCCCCCEEEEEHHCHHHHCHHHCCC PEGIGGVPITRKQIRASRKALDIIEDEVGRPINFHSYVSGVAGPEIAVLFAEEGVNGAHQ CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCC DPQYNVLYRGINPIRSFVDAAVAKKIMAWANMLQIDGAHNANASAKMAWKVMPELIVQHA CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHH INCMFSLKAGMKKENIALSTVPPMVSPAPEFKLNFIYALTVRELFKGFRFRAQMNTRYIE HHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHEEHHHCHHHHH SDLFDATRIHVLDTLISRLTSADLQSTITPDEGRNVPWHINSVRGVETAKHTLIALDGIK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHH KFLKVNEEEVRPRIRELKMRAILFMEEILEIGGYFEAVEQGFFVDNGYYPERMGDGIARP HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEECCCCCHHHHCCCCCCC KDGGIGAGSVVPRDPDYMAPVCEHFGYNNLPEGIEKPCDLIGGCTFHNPEKIQFIDELDE CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCC NDNVTNRIQKVIEEREKGFIGPEVEWWGDGWIQIDMTIPDDEAHAEAAAIEICKRLGLEE CCCHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCC PTVISKTILHPVEGTYIELKARVPFKVNRNELELPKKPETLPEEEIFQYVSKHPIKVVAG CCHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEE TAGNDEHSVGLREILDIKHGGIEKYGIKYTYLGTSVPPEKFIDAAIETGADAILVSLIIT CCCCCCHHHHHHHHHHHCCCCCCHHCEEEEEECCCCCHHHHHHHHHHCCHHHEEHHHHHH HNDVHVQNMKKIHQLAIEKGIRDKIILIAGGTQINNDLAVSCGMDGGFGRGTKGIHVASF CCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCEEEEECCCCCCCCCCCCHHHHHH LVKKLREKHSN HHHHHHHHCCC >Mature Secondary Structure SLPPNERLNVEEILKDLEHYRPRRRGWTWRKKLPEGTKIGEFTYDQISEPLKNSVPLPA CCCCCCCCCHHHHHHHHHHHCHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCC AHHFGNIDPQPDVVITSEIASGRFEDDIRRMRMAAWHGADHIMVIRTLGQSHMDGLIEGT HHHCCCCCCCCCEEEEECHHCCCCHHHHHHHHHHHHCCCCCEEEEEHHCHHHHCHHHCCC PEGIGGVPITRKQIRASRKALDIIEDEVGRPINFHSYVSGVAGPEIAVLFAEEGVNGAHQ CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCC DPQYNVLYRGINPIRSFVDAAVAKKIMAWANMLQIDGAHNANASAKMAWKVMPELIVQHA CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHH INCMFSLKAGMKKENIALSTVPPMVSPAPEFKLNFIYALTVRELFKGFRFRAQMNTRYIE HHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHEEHHHCHHHHH SDLFDATRIHVLDTLISRLTSADLQSTITPDEGRNVPWHINSVRGVETAKHTLIALDGIK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHH KFLKVNEEEVRPRIRELKMRAILFMEEILEIGGYFEAVEQGFFVDNGYYPERMGDGIARP HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEECCCCCHHHHCCCCCCC KDGGIGAGSVVPRDPDYMAPVCEHFGYNNLPEGIEKPCDLIGGCTFHNPEKIQFIDELDE CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCC NDNVTNRIQKVIEEREKGFIGPEVEWWGDGWIQIDMTIPDDEAHAEAAAIEICKRLGLEE CCCHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCC PTVISKTILHPVEGTYIELKARVPFKVNRNELELPKKPETLPEEEIFQYVSKHPIKVVAG CCHHHHHHHCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEE TAGNDEHSVGLREILDIKHGGIEKYGIKYTYLGTSVPPEKFIDAAIETGADAILVSLIIT CCCCCCHHHHHHHHHHHCCCCCCHHCEEEEEECCCCCHHHHHHHHHHCCHHHEEHHHHHH HNDVHVQNMKKIHQLAIEKGIRDKIILIAGGTQINNDLAVSCGMDGGFGRGTKGIHVASF CCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEECCCEEEEECCCCCCCCCCCCHHHHHH LVKKLREKHSN HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA