| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616600
Identifier: 239616600
GI number: 239616600
Start: 216631
End: 218505
Strand: Reverse
Name: 239616600
Synonym: Kole_0192
Alternate gene names: NA
Gene position: 218505-216631 (Counterclockwise)
Preceding gene: 239616601
Following gene: 239616599
Centisome position: 9.49
GC content: 46.29
Gene sequence:
>1875_bases ATGAGTTGTGTAGTCAGAAAAGGGTTCAAAAGTTGGAAGTTGGTGATGGTAGTTACCCTGGTATTGTTTCTGTTAACAGC TTGTCCAGGTTTTAACAATCCCGATGGCAATGATGAAGCAGAAAAGCAGTACGTATATGCCGCGGGTGGAGTTGAAGGGT TGTTAATATTTGAGGTTAGTGACCCGGAAAATCCCATACTGGTTAGCTATTATGACACGGATGGTTGTGCATATGGGGTA ACGGTATCAGGAGGCTATGCGTACGTGGCGGACGATTATAATGGTCTTGTGGTAATCGATATATCTGAACCGTCAAATCC TGCGGAGGTAGGCCACTATGACACGGCTGATGCTGCATATGGAGTAACCGTAGTCGGGAACTACGCATATGTGGCGGACA ATGATAACGGTCTTGTGGTAATCGATATATCTGAACCGTCAAATCCTGCGGAGGTAGGCCACTATGACACGGCTGGTGCT GCGTATGGAGTAACCGTAGTCGGGAACTACGCATATGTGGCGGATAATGATAATGGTCTGGTTATCATAGATATATCCGA TCCGACAAATCTCTTACAGATTGGTCATTATGACACAGTTGGTTATGCATGCGGAGTAACGGTGGTAGGAGATTACGCAT ACGTGGCGGACTGGGAGAACGGTCTGGTGGTGATAGATATATCCGATCCATCAAGTCCCATACTGGTTGGTCGTTATGAC ACGGATGGTAGTGCATATGGAGTAACGGTATCAGGAGACTATGCGTACGTGGCGGACGATGATAACGGTCTTGTGGTAAT CGATATATCTGAATCGTCAAGTCCTGTAGAGGTAGGCTGCTATGACACAGCTGATGAAGCATATGGAGTAACCGTAGTCG GGAACTACGCATACGTGGCAGACGGTGGTAACGGCCTTGTGGTGATAGATATATCCGATCCGACAAATCCAGTGCAAATT GGTCATTATGACACAGGTAGGTGGGCAAGTGAAGTAGTGGTATCAGGAAACTATGCGTATGTGGCAGACGGGGATAACGG TCTTGTGGTAATCGACGTATCTGATTCTGTTAAGGTAGGTCACTATGACACTGCTGGTGACGCATGTGGAGTAACGGTGG AAGGAGATTACGCATACGTGGCGGACTGGGAGAACGGTCTGGTGGTGATAGATATATCCGATCCATCAAATCCCATACTG GTTGGTCGTTATGACACTGCTGGTTATGCATGCGGAGTAACGGTGGTAGGAGATTACGCATACGTGGCGGACGATTATAA CGGGCTTGTAGTGATAGGCATATCCGAACCGACAAATCCTGTCCAAATTGGTCATTATGACACGGATGGTTGGGCAAATG GAGTAACAGTAGCGGGAGACTACGCGTATGTAGCGGATATGAGCAGTCTGGTGGTGATGGATATATCTGATCCGTCAAAT CCGATACCGGTTTGTCATTATGATACAGATGGTTATGCATGTGGAGTAACGGTGGAAGGAGATTTCGCATACGTGGCCGA TTGGGGAAATGGCCTGGTTGTGATGGATATATCCGATCCATCAAATCCCATACTGGTTGGTCATTATGACACGAATGGTT GGGCATGTGGAGTAGAGGTATCAGGAGACTATGCATATATAGCAGACGGAGACAACGGTCTTGTGATGATAGACATATCT GATCAGTCAAATCCTGTGGAGATAGGTAGTTTTGATTTGAATGGTTTTGTATATAGGGTAACGGTAGCGGAAGACTACGC GTACGTGGCTAACTGGGATAACGGTCTGGTTATCTTAGATATATCCGACCCATCAAATCCCAAATTAGTAAATGATATGC CTTGGATCACGCTTTACGGAATATGTGGTAATTAA
Upstream 100 bases:
>100_bases AAATCGAATCTTGAATGCAAGTGTGTTATTAATAACAGAAAATAACGTTTGTGATGTTATAATAAAACTTTATACTTCAA AGAAGGGGGATGGGGTATCG
Downstream 100 bases:
>100_bases ATCATGAGGCAATAGAGCGAGATTGGAGAAGATTGCTTCGCAGTTGAAAAAATGATGCTTAAAATGATAACCGTGATCCT AGAATCGCTATTGTAGGGGC
Product: LVIVD repeat protein
Products: NA
Alternate protein names: LVIVD Repeat Protein; Outer Membrane Adhesin Like Proteiin; Lipoprotein; PKD Domain-Containing Protein; Bacterial Pre-Peptidase C-Terminal Domain Family; Peptidase M; IPT/TIG Domain Protein; PA14 Domain-Containing Protein; Cell Surface Receptor IPT/TIG Domain-Containing Protein; Ig Family Protein
Number of amino acids: Translated: 624; Mature: 623
Protein sequence:
>624_residues MSCVVRKGFKSWKLVMVVTLVLFLLTACPGFNNPDGNDEAEKQYVYAAGGVEGLLIFEVSDPENPILVSYYDTDGCAYGV TVSGGYAYVADDYNGLVVIDISEPSNPAEVGHYDTADAAYGVTVVGNYAYVADNDNGLVVIDISEPSNPAEVGHYDTAGA AYGVTVVGNYAYVADNDNGLVIIDISDPTNLLQIGHYDTVGYACGVTVVGDYAYVADWENGLVVIDISDPSSPILVGRYD TDGSAYGVTVSGDYAYVADDDNGLVVIDISESSSPVEVGCYDTADEAYGVTVVGNYAYVADGGNGLVVIDISDPTNPVQI GHYDTGRWASEVVVSGNYAYVADGDNGLVVIDVSDSVKVGHYDTAGDACGVTVEGDYAYVADWENGLVVIDISDPSNPIL VGRYDTAGYACGVTVVGDYAYVADDYNGLVVIGISEPTNPVQIGHYDTDGWANGVTVAGDYAYVADMSSLVVMDISDPSN PIPVCHYDTDGYACGVTVEGDFAYVADWGNGLVVMDISDPSNPILVGHYDTNGWACGVEVSGDYAYIADGDNGLVMIDIS DQSNPVEIGSFDLNGFVYRVTVAEDYAYVANWDNGLVILDISDPSNPKLVNDMPWITLYGICGN
Sequences:
>Translated_624_residues MSCVVRKGFKSWKLVMVVTLVLFLLTACPGFNNPDGNDEAEKQYVYAAGGVEGLLIFEVSDPENPILVSYYDTDGCAYGV TVSGGYAYVADDYNGLVVIDISEPSNPAEVGHYDTADAAYGVTVVGNYAYVADNDNGLVVIDISEPSNPAEVGHYDTAGA AYGVTVVGNYAYVADNDNGLVIIDISDPTNLLQIGHYDTVGYACGVTVVGDYAYVADWENGLVVIDISDPSSPILVGRYD TDGSAYGVTVSGDYAYVADDDNGLVVIDISESSSPVEVGCYDTADEAYGVTVVGNYAYVADGGNGLVVIDISDPTNPVQI GHYDTGRWASEVVVSGNYAYVADGDNGLVVIDVSDSVKVGHYDTAGDACGVTVEGDYAYVADWENGLVVIDISDPSNPIL VGRYDTAGYACGVTVVGDYAYVADDYNGLVVIGISEPTNPVQIGHYDTDGWANGVTVAGDYAYVADMSSLVVMDISDPSN PIPVCHYDTDGYACGVTVEGDFAYVADWGNGLVVMDISDPSNPILVGHYDTNGWACGVEVSGDYAYIADGDNGLVMIDIS DQSNPVEIGSFDLNGFVYRVTVAEDYAYVANWDNGLVILDISDPSNPKLVNDMPWITLYGICGN >Mature_623_residues SCVVRKGFKSWKLVMVVTLVLFLLTACPGFNNPDGNDEAEKQYVYAAGGVEGLLIFEVSDPENPILVSYYDTDGCAYGVT VSGGYAYVADDYNGLVVIDISEPSNPAEVGHYDTADAAYGVTVVGNYAYVADNDNGLVVIDISEPSNPAEVGHYDTAGAA YGVTVVGNYAYVADNDNGLVIIDISDPTNLLQIGHYDTVGYACGVTVVGDYAYVADWENGLVVIDISDPSSPILVGRYDT DGSAYGVTVSGDYAYVADDDNGLVVIDISESSSPVEVGCYDTADEAYGVTVVGNYAYVADGGNGLVVIDISDPTNPVQIG HYDTGRWASEVVVSGNYAYVADGDNGLVVIDVSDSVKVGHYDTAGDACGVTVEGDYAYVADWENGLVVIDISDPSNPILV GRYDTAGYACGVTVVGDYAYVADDYNGLVVIGISEPTNPVQIGHYDTDGWANGVTVAGDYAYVADMSSLVVMDISDPSNP IPVCHYDTDGYACGVTVEGDFAYVADWGNGLVVMDISDPSNPILVGHYDTNGWACGVEVSGDYAYIADGDNGLVMIDISD QSNPVEIGSFDLNGFVYRVTVAEDYAYVANWDNGLVILDISDPSNPKLVNDMPWITLYGICGN
Specific function: Unknown
COG id: COG5276
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65839; Mature: 65708
Theoretical pI: Translated: 3.36; Mature: 3.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCVVRKGFKSWKLVMVVTLVLFLLTACPGFNNPDGNDEAEKQYVYAAGGVEGLLIFEVS CCEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEEECCCCEEEEEEEC DPENPILVSYYDTDGCAYGVTVSGGYAYVADDYNGLVVIDISEPSNPAEVGHYDTADAAY CCCCCEEEEEECCCCEEEEEEEECCEEEEEECCCCEEEEEECCCCCCHHCCCCCCCCCCE GVTVVGNYAYVADNDNGLVVIDISEPSNPAEVGHYDTAGAAYGVTVVGNYAYVADNDNGL EEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCE VIIDISDPTNLLQIGHYDTVGYACGVTVVGDYAYVADWENGLVVIDISDPSSPILVGRYD EEEECCCCCCEEEECCCCCCCEEECEEEEECEEEEEECCCCEEEEEECCCCCCEEEEEEC TDGSAYGVTVSGDYAYVADDDNGLVVIDISESSSPVEVGCYDTADEAYGVTVVGNYAYVA CCCCEEEEEEECCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCCEEEEEEECEEEEE DGGNGLVVIDISDPTNPVQIGHYDTGRWASEVVVSGNYAYVADGDNGLVVIDVSDSVKVG ECCCEEEEEECCCCCCCEEEEECCCCCCEEEEEEECCEEEEEECCCCEEEEECCCCEEEC HYDTAGDACGVTVEGDYAYVADWENGLVVIDISDPSNPILVGRYDTAGYACGVTVVGDYA EECCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCEEEEEEEEECEE YVADDYNGLVVIGISEPTNPVQIGHYDTDGWANGVTVAGDYAYVADMSSLVVMDISDPSN EEEECCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEECCEEEEECCCEEEEEEECCCCC PIPVCHYDTDGYACGVTVEGDFAYVADWGNGLVVMDISDPSNPILVGHYDTNGWACGVEV CCEEEEECCCCEEEEEEECCCEEEEEECCCCEEEEECCCCCCCEEEEEECCCCEEEEEEE SGDYAYIADGDNGLVMIDISDQSNPVEIGSFDLNGFVYRVTVAEDYAYVANWDNGLVILD CCCEEEEEECCCCEEEEEECCCCCCEEEEEEECCCEEEEEEEECCEEEEEECCCCEEEEE ISDPSNPKLVNDMPWITLYGICGN CCCCCCCCEECCCCEEEEEEEECC >Mature Secondary Structure SCVVRKGFKSWKLVMVVTLVLFLLTACPGFNNPDGNDEAEKQYVYAAGGVEGLLIFEVS CEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEEECCCCEEEEEEEC DPENPILVSYYDTDGCAYGVTVSGGYAYVADDYNGLVVIDISEPSNPAEVGHYDTADAAY CCCCCEEEEEECCCCEEEEEEEECCEEEEEECCCCEEEEEECCCCCCHHCCCCCCCCCCE GVTVVGNYAYVADNDNGLVVIDISEPSNPAEVGHYDTAGAAYGVTVVGNYAYVADNDNGL EEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCE VIIDISDPTNLLQIGHYDTVGYACGVTVVGDYAYVADWENGLVVIDISDPSSPILVGRYD EEEECCCCCCEEEECCCCCCCEEECEEEEECEEEEEECCCCEEEEEECCCCCCEEEEEEC TDGSAYGVTVSGDYAYVADDDNGLVVIDISESSSPVEVGCYDTADEAYGVTVVGNYAYVA CCCCEEEEEEECCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCCEEEEEEECEEEEE DGGNGLVVIDISDPTNPVQIGHYDTGRWASEVVVSGNYAYVADGDNGLVVIDVSDSVKVG ECCCEEEEEECCCCCCCEEEEECCCCCCEEEEEEECCEEEEEECCCCEEEEECCCCEEEC HYDTAGDACGVTVEGDYAYVADWENGLVVIDISDPSNPILVGRYDTAGYACGVTVVGDYA EECCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCEEEEEEEEECEE YVADDYNGLVVIGISEPTNPVQIGHYDTDGWANGVTVAGDYAYVADMSSLVVMDISDPSN EEEECCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEECCEEEEECCCEEEEEEECCCCC PIPVCHYDTDGYACGVTVEGDFAYVADWGNGLVVMDISDPSNPILVGHYDTNGWACGVEV CCEEEEECCCCEEEEEEECCCEEEEEECCCCEEEEECCCCCCCEEEEEECCCCEEEEEEE SGDYAYIADGDNGLVMIDISDQSNPVEIGSFDLNGFVYRVTVAEDYAYVANWDNGLVILD CCCEEEEEECCCCEEEEEECCCCCCEEEEEEECCCEEEEEEEECCEEEEEECCCCEEEEE ISDPSNPKLVNDMPWITLYGICGN CCCCCCCCEECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA