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The map label for this gene is uidR [C]

Identifier: 239616536

GI number: 239616536

Start: 143686

End: 144267

Strand: Reverse

Name: uidR [C]

Synonym: Kole_0128

Alternate gene names: 239616536

Gene position: 144267-143686 (Counterclockwise)

Preceding gene: 239616537

Following gene: 239616529

Centisome position: 6.27

GC content: 41.58

Gene sequence:

>582_bases
GTGCAAATAAAGAAGGAAGATAAGAAAGACAGAATCCTCAAAAGCGCAGAGAAACTCTTTGCCGAGAAAGGATACGCTAA
TGTTTCAATAAGCGAGATCGCTAAAGACGCGAAGGTTGGCAAAGGGACAATATACGTTTATTTTTCATCAAAGGAAGAAA
TTCTTGACGCCGTTGCTCTCAGGATCTTCGAGGAATTTGTGGATGGCGCCAGATACGCACTTGAGATGTCCAAAAACCTT
AAGGAATTCCTCGAATTGCTTGCCGAAAAGCTGTCAAAAGATGTAGAAAACAGGAGCAAAATATTGGCGATGTTCCACCG
AGAAAGACTAAAGGACAGGAGCAAATATCGGGAGATAACCTCGGAGTATAGAAAGGTCTTTATGGCGGCATACGAAAGAT
ACAGGGACGAATTCAAAATCCCCTTTGATGAAATGTTTGCCTTCATGAGAGGAATATTCATGAGCGCATATACCATGGCG
GACAACATAACAGAAGAATCGATAAAGATTTTTTTGAAAAAGATCCTGCTGTGTTTTTTTGATGTCCAGAAGGATATGGA
TTGCGGATCAGGCGCGTCTTGA

Upstream 100 bases:

>100_bases
GGCTCATAAAGTAGTAAAATCGTTTTGTGATGACAGTCTCATAAGTGATATATTTGTCGTTCCAGGTATTAACGGATTGG
TTCTTGGAGGAGTGTGGTAA

Downstream 100 bases:

>100_bases
CACCCATAACCGTTAATGCTAAACTATTTTTGTGCGCCGGGGTGGCGGAATTGGCAGACGCGCATGACTCAGGATCATGT
GGGCATTACGCCTGTGCGGG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MQIKKEDKKDRILKSAEKLFAEKGYANVSISEIAKDAKVGKGTIYVYFSSKEEILDAVALRIFEEFVDGARYALEMSKNL
KEFLELLAEKLSKDVENRSKILAMFHRERLKDRSKYREITSEYRKVFMAAYERYRDEFKIPFDEMFAFMRGIFMSAYTMA
DNITEESIKIFLKKILLCFFDVQKDMDCGSGAS

Sequences:

>Translated_193_residues
MQIKKEDKKDRILKSAEKLFAEKGYANVSISEIAKDAKVGKGTIYVYFSSKEEILDAVALRIFEEFVDGARYALEMSKNL
KEFLELLAEKLSKDVENRSKILAMFHRERLKDRSKYREITSEYRKVFMAAYERYRDEFKIPFDEMFAFMRGIFMSAYTMA
DNITEESIKIFLKKILLCFFDVQKDMDCGSGAS
>Mature_193_residues
MQIKKEDKKDRILKSAEKLFAEKGYANVSISEIAKDAKVGKGTIYVYFSSKEEILDAVALRIFEEFVDGARYALEMSKNL
KEFLELLAEKLSKDVENRSKILAMFHRERLKDRSKYREITSEYRKVFMAAYERYRDEFKIPFDEMFAFMRGIFMSAYTMA
DNITEESIKIFLKKILLCFFDVQKDMDCGSGAS

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22606; Mature: 22606

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIKKEDKKDRILKSAEKLFAEKGYANVSISEIAKDAKVGKGTIYVYFSSKEEILDAVAL
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHH
RIFEEFVDGARYALEMSKNLKEFLELLAEKLSKDVENRSKILAMFHRERLKDRSKYREIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEYRKVFMAAYERYRDEFKIPFDEMFAFMRGIFMSAYTMADNITEESIKIFLKKILLCFF
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVQKDMDCGSGAS
HHHHCCCCCCCCC
>Mature Secondary Structure
MQIKKEDKKDRILKSAEKLFAEKGYANVSISEIAKDAKVGKGTIYVYFSSKEEILDAVAL
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHH
RIFEEFVDGARYALEMSKNLKEFLELLAEKLSKDVENRSKILAMFHRERLKDRSKYREIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEYRKVFMAAYERYRDEFKIPFDEMFAFMRGIFMSAYTMADNITEESIKIFLKKILLCFF
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVQKDMDCGSGAS
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA