| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616483
Identifier: 239616483
GI number: 239616483
Start: 85901
End: 87112
Strand: Reverse
Name: 239616483
Synonym: Kole_0073
Alternate gene names: NA
Gene position: 87112-85901 (Counterclockwise)
Preceding gene: 239616488
Following gene: 239616481
Centisome position: 3.78
GC content: 40.76
Gene sequence:
>1212_bases ATGATTTCCTTAGATGTATATTTTGAAATTCAGGATCGTTTATTAAAAGCGGTTCCAACGGAGTTTAGACGGTATCTTTA TACCACTATTAACTGGGATGCCAGAATGATAGGGTTGACAGGGTTTAGGGGCATTGGTAAAACAACATTATTGCTGCAAT GGTTAGCAAACGAATCAAAGGGTTCTTCTGAATATTTGTACATATCAGCGGATAACCCCCTTGTTTTGAAGGATGGGTTG TACAATATCGGGGATACTTTTTTTAAGTACGGAGGAAAGCTCTTGGTTGTAGATGAAGCACACAGATATCCTGGTTGGTC TTCAGAGCTGAAAGCGCTTTACGATGCTTTCCCGAATAAGAAAATCATCTTCACAGGCAGTTCTACAATGGAGATATTGA GAGGAAAAGCGGATCTTTCGCGTAGAGCTGTGATTTACAACCTGAACATTCTCTCGTTCAGAGAGTACCTTCAGATTAGA ACAGGTGACCGTATCGAATCGGTGAAACTGGATGAGCTGCTGATAAATCACAGGAAAATCTCAGCATCTTTATTGCATTA TGAACCTTTGAAGTTTTTCTCTGAGTATCTCCAGCAAGGTGCATATCCATATTTTGTCGAAGGGGATTATTACAACAAGG TCCTTAATACGCTGGATAAGGTTATTTACGATGACATTATGGGCGTCAGCGGTATAAAGCCTGAAGGAGCCGCAACGATA AAGCGGCTTATTGCCTTCCTGACTACGAGTACTGTTCCTAAGATATCTGCTGAAAAATTGTGCAACGCTCTCGGTATAAC AAAACCCACTCTGTACAACTACCTCGATTTAATGGAGCATGTTCGGCTCATTACCCGTGTTCCACCGGAGAAAATAGGGC ACAAATTCCTCAGAAGCGGAGCAAAAGTGTTCTTGAGCAATCCAAATATTTATTATGCACTAAGCAGGCCAATCTGGAGT CTTGAAGCAAATACTGGCACAATACGGGAAGCGTTTTTTGCCAGCCAATTTTTTTCTTATTCAATTGCTGTGCCAGACGT TGGCGATTTTTCCATAAGGTTTAATGGAAAACGGATCGTATTCGAAATAGGTGGTCCCGGAAAAACGCTTCAACAGATAA AAAACGAGAAAAATGCTTTTGTACTGAAAGACGGCATAGAAAGTGGTTATTCACAGGTTATTCCACTATATTTGATCGGG ATGATGTATTGA
Upstream 100 bases:
>100_bases TGTTTTTCATAATTTCTTGACATCATAATAATTGTAGTAAAGTATGATATACTATAAGCAAGAATATAGTAAAATGCATT ATACATTAGGGGTTGATCGG
Downstream 100 bases:
>100_bases AACATGTTTGTTTCTACTATTCGTCTGTGCAATAGATGTGCAACTAACGCGCAATTACCTAGGTTTTATCTATGATTCTC AGCTATCTTTTTTACTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MISLDVYFEIQDRLLKAVPTEFRRYLYTTINWDARMIGLTGFRGIGKTTLLLQWLANESKGSSEYLYISADNPLVLKDGL YNIGDTFFKYGGKLLVVDEAHRYPGWSSELKALYDAFPNKKIIFTGSSTMEILRGKADLSRRAVIYNLNILSFREYLQIR TGDRIESVKLDELLINHRKISASLLHYEPLKFFSEYLQQGAYPYFVEGDYYNKVLNTLDKVIYDDIMGVSGIKPEGAATI KRLIAFLTTSTVPKISAEKLCNALGITKPTLYNYLDLMEHVRLITRVPPEKIGHKFLRSGAKVFLSNPNIYYALSRPIWS LEANTGTIREAFFASQFFSYSIAVPDVGDFSIRFNGKRIVFEIGGPGKTLQQIKNEKNAFVLKDGIESGYSQVIPLYLIG MMY
Sequences:
>Translated_403_residues MISLDVYFEIQDRLLKAVPTEFRRYLYTTINWDARMIGLTGFRGIGKTTLLLQWLANESKGSSEYLYISADNPLVLKDGL YNIGDTFFKYGGKLLVVDEAHRYPGWSSELKALYDAFPNKKIIFTGSSTMEILRGKADLSRRAVIYNLNILSFREYLQIR TGDRIESVKLDELLINHRKISASLLHYEPLKFFSEYLQQGAYPYFVEGDYYNKVLNTLDKVIYDDIMGVSGIKPEGAATI KRLIAFLTTSTVPKISAEKLCNALGITKPTLYNYLDLMEHVRLITRVPPEKIGHKFLRSGAKVFLSNPNIYYALSRPIWS LEANTGTIREAFFASQFFSYSIAVPDVGDFSIRFNGKRIVFEIGGPGKTLQQIKNEKNAFVLKDGIESGYSQVIPLYLIG MMY >Mature_403_residues MISLDVYFEIQDRLLKAVPTEFRRYLYTTINWDARMIGLTGFRGIGKTTLLLQWLANESKGSSEYLYISADNPLVLKDGL YNIGDTFFKYGGKLLVVDEAHRYPGWSSELKALYDAFPNKKIIFTGSSTMEILRGKADLSRRAVIYNLNILSFREYLQIR TGDRIESVKLDELLINHRKISASLLHYEPLKFFSEYLQQGAYPYFVEGDYYNKVLNTLDKVIYDDIMGVSGIKPEGAATI KRLIAFLTTSTVPKISAEKLCNALGITKPTLYNYLDLMEHVRLITRVPPEKIGHKFLRSGAKVFLSNPNIYYALSRPIWS LEANTGTIREAFFASQFFSYSIAVPDVGDFSIRFNGKRIVFEIGGPGKTLQQIKNEKNAFVLKDGIESGYSQVIPLYLIG MMY
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR000767 - InterPro: IPR013317 [H]
Pfam domain/function: PF00308 Bac_DnaA [H]
EC number: NA
Molecular weight: Translated: 45891; Mature: 45891
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLDVYFEIQDRLLKAVPTEFRRYLYTTINWDARMIGLTGFRGIGKTTLLLQWLANESK CEEEEEEEHHHHHHHHHCCHHHHHHEEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCC GSSEYLYISADNPLVLKDGLYNIGDTFFKYGGKLLVVDEAHRYPGWSSELKALYDAFPNK CCCCEEEEECCCCEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCC KIIFTGSSTMEILRGKADLSRRAVIYNLNILSFREYLQIRTGDRIESVKLDELLINHRKI EEEEECCCHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHCCCCCCHHEEHHHHHHHHHHH SASLLHYEPLKFFSEYLQQGAYPYFVEGDYYNKVLNTLDKVIYDDIMGVSGIKPEGAATI HHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH KRLIAFLTTSTVPKISAEKLCNALGITKPTLYNYLDLMEHVRLITRVPPEKIGHKFLRSG HHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC AKVFLSNPNIYYALSRPIWSLEANTGTIREAFFASQFFSYSIAVPDVGDFSIRFNGKRIV CEEEEECCCEEEEECCCEEEEECCCCHHHHHHHHHHHHEEEEECCCCCCEEEEECCCEEE FEIGGPGKTLQQIKNEKNAFVLKDGIESGYSQVIPLYLIGMMY EEECCCCHHHHHHHCCCCEEEEECCHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MISLDVYFEIQDRLLKAVPTEFRRYLYTTINWDARMIGLTGFRGIGKTTLLLQWLANESK CEEEEEEEHHHHHHHHHCCHHHHHHEEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCC GSSEYLYISADNPLVLKDGLYNIGDTFFKYGGKLLVVDEAHRYPGWSSELKALYDAFPNK CCCCEEEEECCCCEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCC KIIFTGSSTMEILRGKADLSRRAVIYNLNILSFREYLQIRTGDRIESVKLDELLINHRKI EEEEECCCHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHCCCCCCHHEEHHHHHHHHHHH SASLLHYEPLKFFSEYLQQGAYPYFVEGDYYNKVLNTLDKVIYDDIMGVSGIKPEGAATI HHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH KRLIAFLTTSTVPKISAEKLCNALGITKPTLYNYLDLMEHVRLITRVPPEKIGHKFLRSG HHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC AKVFLSNPNIYYALSRPIWSLEANTGTIREAFFASQFFSYSIAVPDVGDFSIRFNGKRIV CEEEEECCCEEEEECCCEEEEECCCCHHHHHHHHHHHHEEEEECCCCCCEEEEECCCEEE FEIGGPGKTLQQIKNEKNAFVLKDGIESGYSQVIPLYLIGMMY EEECCCCHHHHHHHCCCCEEEEECCHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]