| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616447
Identifier: 239616447
GI number: 239616447
Start: 42880
End: 43641
Strand: Reverse
Name: 239616447
Synonym: Kole_0036
Alternate gene names: NA
Gene position: 43641-42880 (Counterclockwise)
Preceding gene: 239616448
Following gene: 239616446
Centisome position: 1.9
GC content: 41.34
Gene sequence:
>762_bases GTGAGTGACAAAGCCTTTGGAGCAGCGGTCAGGATGCTTTCAGTTTTTGTGATAGCCCTTTCGATTGCGGTATTCATTGT TGGGGGGTATGCATACCTATTGAAACAGGAAAACGACAATTATAGACTCATCGTTGAAGAAATAAGAAACAGCGTAAATC CAACTATAGCTGCAACGGAACCTCAAGAACCCTCCTTAGAACCTCTTAAGAAAGAGATAGAAAAACTTGAAGAAGCTTCT CCGGATAAAGAGATGGCGGTTGAAGAGCCTGAAAGGCACTTCTTTCTTGAGAGCTTCGATTACGAAAGACTTATTATAGA ATCTTTTGATTACTTTGTCCAGGGAACTGCGTTCAGTTACGTTGTAGTTGATGAGAATACGGCATTTAAACTCTGTATTG AAAAGGGAAAAGACAATTATTTCATCACCAAAATTGATCCAGGAAATTACGGAATAATGTTCCTTGGTGAAAACCCGCTG GAAGGGTTATTTGCTTCAAAGGTAGCTTATGGAGTTCAGCTTGTTTCGCATACAATAGTAGATGGTATAGCACCGCAGAT TATAAATCTCAGGGCAAACGGTTATCCGGCTTTTGCTTATAAATTCTACACTGCCGATGGCCGAACGTTCTACGCGGCAA TTCTCGGGGCATTTCCCGATCTCGAAACCGCGAGAGATTATTCTGAAGCTTTGAATGTTTTCAAGGTTGAGGAAATAACA GGCTGGGATATTTCCGGAAGGTACTTGAGGAGAATCAAATGA
Upstream 100 bases:
>100_bases TCTGGCTCCCGGGTGGAGCACAACAGAGAAGGGTTGTGGTTTCTTCTACAGAACTTTCCCGGATGGTGAGAAAAAATATG AGAGGATTGGAGAGTTTTAC
Downstream 100 bases:
>100_bases AACGACTTTCTTCAAAAGAAGCGCAATTACTTGGGTCCGTGATTTTCATCGTTGTTATTGGTTTTATAGCTTTATTGAAC ATGGGTGAGACCAATGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MSDKAFGAAVRMLSVFVIALSIAVFIVGGYAYLLKQENDNYRLIVEEIRNSVNPTIAATEPQEPSLEPLKKEIEKLEEAS PDKEMAVEEPERHFFLESFDYERLIIESFDYFVQGTAFSYVVVDENTAFKLCIEKGKDNYFITKIDPGNYGIMFLGENPL EGLFASKVAYGVQLVSHTIVDGIAPQIINLRANGYPAFAYKFYTADGRTFYAAILGAFPDLETARDYSEALNVFKVEEIT GWDISGRYLRRIK
Sequences:
>Translated_253_residues MSDKAFGAAVRMLSVFVIALSIAVFIVGGYAYLLKQENDNYRLIVEEIRNSVNPTIAATEPQEPSLEPLKKEIEKLEEAS PDKEMAVEEPERHFFLESFDYERLIIESFDYFVQGTAFSYVVVDENTAFKLCIEKGKDNYFITKIDPGNYGIMFLGENPL EGLFASKVAYGVQLVSHTIVDGIAPQIINLRANGYPAFAYKFYTADGRTFYAAILGAFPDLETARDYSEALNVFKVEEIT GWDISGRYLRRIK >Mature_252_residues SDKAFGAAVRMLSVFVIALSIAVFIVGGYAYLLKQENDNYRLIVEEIRNSVNPTIAATEPQEPSLEPLKKEIEKLEEASP DKEMAVEEPERHFFLESFDYERLIIESFDYFVQGTAFSYVVVDENTAFKLCIEKGKDNYFITKIDPGNYGIMFLGENPLE GLFASKVAYGVQLVSHTIVDGIAPQIINLRANGYPAFAYKFYTADGRTFYAAILGAFPDLETARDYSEALNVFKVEEITG WDISGRYLRRIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28590; Mature: 28459
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKAFGAAVRMLSVFVIALSIAVFIVGGYAYLLKQENDNYRLIVEEIRNSVNPTIAATE CCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEEHHHHHHCCCCCEEECC PQEPSLEPLKKEIEKLEEASPDKEMAVEEPERHFFLESFDYERLIIESFDYFVQGTAFSY CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEHHCCCHHHHHHHHHHHHEECCEEEE VVVDENTAFKLCIEKGKDNYFITKIDPGNYGIMFLGENPLEGLFASKVAYGVQLVSHTIV EEEECCCEEEEEEECCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH DGIAPQIINLRANGYPAFAYKFYTADGRTFYAAILGAFPDLETARDYSEALNVFKVEEIT HCCCCCEEEEECCCCEEEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCEEEEEEEC GWDISGRYLRRIK CCCCCCHHHHHCC >Mature Secondary Structure SDKAFGAAVRMLSVFVIALSIAVFIVGGYAYLLKQENDNYRLIVEEIRNSVNPTIAATE CCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEEHHHHHHCCCCCEEECC PQEPSLEPLKKEIEKLEEASPDKEMAVEEPERHFFLESFDYERLIIESFDYFVQGTAFSY CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEHHCCCHHHHHHHHHHHHEECCEEEE VVVDENTAFKLCIEKGKDNYFITKIDPGNYGIMFLGENPLEGLFASKVAYGVQLVSHTIV EEEECCCEEEEEEECCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH DGIAPQIINLRANGYPAFAYKFYTADGRTFYAAILGAFPDLETARDYSEALNVFKVEEIT HCCCCCEEEEECCCCEEEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCEEEEEEEC GWDISGRYLRRIK CCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA