Definition Kosmotoga olearia TBF 19.5.1, complete genome.
Accession NC_012785
Length 2,302,126

Click here to switch to the map view.

The map label for this gene is 239616447

Identifier: 239616447

GI number: 239616447

Start: 42880

End: 43641

Strand: Reverse

Name: 239616447

Synonym: Kole_0036

Alternate gene names: NA

Gene position: 43641-42880 (Counterclockwise)

Preceding gene: 239616448

Following gene: 239616446

Centisome position: 1.9

GC content: 41.34

Gene sequence:

>762_bases
GTGAGTGACAAAGCCTTTGGAGCAGCGGTCAGGATGCTTTCAGTTTTTGTGATAGCCCTTTCGATTGCGGTATTCATTGT
TGGGGGGTATGCATACCTATTGAAACAGGAAAACGACAATTATAGACTCATCGTTGAAGAAATAAGAAACAGCGTAAATC
CAACTATAGCTGCAACGGAACCTCAAGAACCCTCCTTAGAACCTCTTAAGAAAGAGATAGAAAAACTTGAAGAAGCTTCT
CCGGATAAAGAGATGGCGGTTGAAGAGCCTGAAAGGCACTTCTTTCTTGAGAGCTTCGATTACGAAAGACTTATTATAGA
ATCTTTTGATTACTTTGTCCAGGGAACTGCGTTCAGTTACGTTGTAGTTGATGAGAATACGGCATTTAAACTCTGTATTG
AAAAGGGAAAAGACAATTATTTCATCACCAAAATTGATCCAGGAAATTACGGAATAATGTTCCTTGGTGAAAACCCGCTG
GAAGGGTTATTTGCTTCAAAGGTAGCTTATGGAGTTCAGCTTGTTTCGCATACAATAGTAGATGGTATAGCACCGCAGAT
TATAAATCTCAGGGCAAACGGTTATCCGGCTTTTGCTTATAAATTCTACACTGCCGATGGCCGAACGTTCTACGCGGCAA
TTCTCGGGGCATTTCCCGATCTCGAAACCGCGAGAGATTATTCTGAAGCTTTGAATGTTTTCAAGGTTGAGGAAATAACA
GGCTGGGATATTTCCGGAAGGTACTTGAGGAGAATCAAATGA

Upstream 100 bases:

>100_bases
TCTGGCTCCCGGGTGGAGCACAACAGAGAAGGGTTGTGGTTTCTTCTACAGAACTTTCCCGGATGGTGAGAAAAAATATG
AGAGGATTGGAGAGTTTTAC

Downstream 100 bases:

>100_bases
AACGACTTTCTTCAAAAGAAGCGCAATTACTTGGGTCCGTGATTTTCATCGTTGTTATTGGTTTTATAGCTTTATTGAAC
ATGGGTGAGACCAATGACGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSDKAFGAAVRMLSVFVIALSIAVFIVGGYAYLLKQENDNYRLIVEEIRNSVNPTIAATEPQEPSLEPLKKEIEKLEEAS
PDKEMAVEEPERHFFLESFDYERLIIESFDYFVQGTAFSYVVVDENTAFKLCIEKGKDNYFITKIDPGNYGIMFLGENPL
EGLFASKVAYGVQLVSHTIVDGIAPQIINLRANGYPAFAYKFYTADGRTFYAAILGAFPDLETARDYSEALNVFKVEEIT
GWDISGRYLRRIK

Sequences:

>Translated_253_residues
MSDKAFGAAVRMLSVFVIALSIAVFIVGGYAYLLKQENDNYRLIVEEIRNSVNPTIAATEPQEPSLEPLKKEIEKLEEAS
PDKEMAVEEPERHFFLESFDYERLIIESFDYFVQGTAFSYVVVDENTAFKLCIEKGKDNYFITKIDPGNYGIMFLGENPL
EGLFASKVAYGVQLVSHTIVDGIAPQIINLRANGYPAFAYKFYTADGRTFYAAILGAFPDLETARDYSEALNVFKVEEIT
GWDISGRYLRRIK
>Mature_252_residues
SDKAFGAAVRMLSVFVIALSIAVFIVGGYAYLLKQENDNYRLIVEEIRNSVNPTIAATEPQEPSLEPLKKEIEKLEEASP
DKEMAVEEPERHFFLESFDYERLIIESFDYFVQGTAFSYVVVDENTAFKLCIEKGKDNYFITKIDPGNYGIMFLGENPLE
GLFASKVAYGVQLVSHTIVDGIAPQIINLRANGYPAFAYKFYTADGRTFYAAILGAFPDLETARDYSEALNVFKVEEITG
WDISGRYLRRIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28590; Mature: 28459

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKAFGAAVRMLSVFVIALSIAVFIVGGYAYLLKQENDNYRLIVEEIRNSVNPTIAATE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEEHHHHHHCCCCCEEECC
PQEPSLEPLKKEIEKLEEASPDKEMAVEEPERHFFLESFDYERLIIESFDYFVQGTAFSY
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEHHCCCHHHHHHHHHHHHEECCEEEE
VVVDENTAFKLCIEKGKDNYFITKIDPGNYGIMFLGENPLEGLFASKVAYGVQLVSHTIV
EEEECCCEEEEEEECCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
DGIAPQIINLRANGYPAFAYKFYTADGRTFYAAILGAFPDLETARDYSEALNVFKVEEIT
HCCCCCEEEEECCCCEEEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCEEEEEEEC
GWDISGRYLRRIK
CCCCCCHHHHHCC
>Mature Secondary Structure 
SDKAFGAAVRMLSVFVIALSIAVFIVGGYAYLLKQENDNYRLIVEEIRNSVNPTIAATE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEEHHHHHHCCCCCEEECC
PQEPSLEPLKKEIEKLEEASPDKEMAVEEPERHFFLESFDYERLIIESFDYFVQGTAFSY
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEHHCCCHHHHHHHHHHHHEECCEEEE
VVVDENTAFKLCIEKGKDNYFITKIDPGNYGIMFLGENPLEGLFASKVAYGVQLVSHTIV
EEEECCCEEEEEEECCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
DGIAPQIINLRANGYPAFAYKFYTADGRTFYAAILGAFPDLETARDYSEALNVFKVEEIT
HCCCCCEEEEECCCCEEEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCEEEEEEEC
GWDISGRYLRRIK
CCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA