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The map label for this gene is ybdO [H]

Identifier: 238926005

GI number: 238926005

Start: 3410867

End: 3411904

Strand: Reverse

Name: ybdO [H]

Synonym: EUBREC_3663

Alternate gene names: 238926005

Gene position: 3411904-3410867 (Counterclockwise)

Preceding gene: 238926006

Following gene: 238926004

Centisome position: 98.9

GC content: 36.22

Gene sequence:

>1038_bases
ATGGTTACTGTAAATAATTCTGACTATTATAATAACATTCCAGCGGGCAGGGATTTAAACAACCTGCCCAATACTTCCAG
CGCTGATACAACTGTAGGATATCAATATGATGGACTTACAGAGGAGGATCGTTTCGTACAAAAAGTTTTGCAGGAGCATT
ATGATAAAGTGTACAAAGAAAATTTGTCTCATTCTGATCCAATGGCATATATCGAATCAAAATATTGTGATGTGACCTCA
CCTAATTTTTGCTCATATATGACAGAAGATCAGCGTTCCATAGCTTACCGCAATGAGAAAAGAATGTTACAAACAGGAGG
AAAATATTCGGCTGGATTTGCCCGGTATGATTATGCATTAAGGAATTACAAGGATGTATATACAGGTGGTTCAAGAAGTG
TTGGTTATGTACGCAATACTGACAGGGAAAAACAGTATGCCAGAAGTGTTGTAAATCAGCAAATTTCAAATCTACTTTCA
AAGAATGGGATATCAATATCAAAACAGGCAGATTTGGTATTTTCTATTGACCCATATACATATCAACTAACGGTGTCGGG
AAATGCAGATAGAGATATATTATCGCAGATAGAAAAATTGCTGAATGAAGGAGATAATGCAAAAAATATTTGGACGCATG
CGTGGATTTGTATGCATGATGCAGATAATGAAATTGTTAATTCGCAGGCAAATATGACAAAGGCAAACCAATATTCTTTA
TGGCATGAAGTGTATGAGACAACCGGGTATGATGCACGCAATGCGACATATAAAAATGGTACTTTTATTGCAGAGGATGG
TACAGATTTACTTGCATTGTTTAAGGAAAAATCTAAAAATGGTGCAGGGTATGAACTTTATTCTAAGAGATGGCTGCAAT
ATGCTAAAAATGGCTGGAAGAAAGAAAATGATTTGGTATTAAAAATAGGCTTTGACAGCAGTGGATTGTATGATATAGGG
CAGGAAAAAGGATATGGAGCAGCACAGAATATGTGGATGAAAGGTGTTAGCCAAAGTATGTTTGAAGCTAGAGTGTGA

Upstream 100 bases:

>100_bases
AAGAATTTTATACCGTACTGGCATCTAAAATAAGAGAATAAAATGCCGGGAGGAATTTAAAGATACAGATTATAAGACTT
ATATAAGGCAGGGGGATAAT

Downstream 100 bases:

>100_bases
TTAATGGGAATCTCTTTTTCAAATATAGGAACAGTTGGAAGGGAACAGCTAATTACTTCTGGTAGTAATGGAGAACCAAA
CTGGTCTTATATTCCATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MVTVNNSDYYNNIPAGRDLNNLPNTSSADTTVGYQYDGLTEEDRFVQKVLQEHYDKVYKENLSHSDPMAYIESKYCDVTS
PNFCSYMTEDQRSIAYRNEKRMLQTGGKYSAGFARYDYALRNYKDVYTGGSRSVGYVRNTDREKQYARSVVNQQISNLLS
KNGISISKQADLVFSIDPYTYQLTVSGNADRDILSQIEKLLNEGDNAKNIWTHAWICMHDADNEIVNSQANMTKANQYSL
WHEVYETTGYDARNATYKNGTFIAEDGTDLLALFKEKSKNGAGYELYSKRWLQYAKNGWKKENDLVLKIGFDSSGLYDIG
QEKGYGAAQNMWMKGVSQSMFEARV

Sequences:

>Translated_345_residues
MVTVNNSDYYNNIPAGRDLNNLPNTSSADTTVGYQYDGLTEEDRFVQKVLQEHYDKVYKENLSHSDPMAYIESKYCDVTS
PNFCSYMTEDQRSIAYRNEKRMLQTGGKYSAGFARYDYALRNYKDVYTGGSRSVGYVRNTDREKQYARSVVNQQISNLLS
KNGISISKQADLVFSIDPYTYQLTVSGNADRDILSQIEKLLNEGDNAKNIWTHAWICMHDADNEIVNSQANMTKANQYSL
WHEVYETTGYDARNATYKNGTFIAEDGTDLLALFKEKSKNGAGYELYSKRWLQYAKNGWKKENDLVLKIGFDSSGLYDIG
QEKGYGAAQNMWMKGVSQSMFEARV
>Mature_345_residues
MVTVNNSDYYNNIPAGRDLNNLPNTSSADTTVGYQYDGLTEEDRFVQKVLQEHYDKVYKENLSHSDPMAYIESKYCDVTS
PNFCSYMTEDQRSIAYRNEKRMLQTGGKYSAGFARYDYALRNYKDVYTGGSRSVGYVRNTDREKQYARSVVNQQISNLLS
KNGISISKQADLVFSIDPYTYQLTVSGNADRDILSQIEKLLNEGDNAKNIWTHAWICMHDADNEIVNSQANMTKANQYSL
WHEVYETTGYDARNATYKNGTFIAEDGTDLLALFKEKSKNGAGYELYSKRWLQYAKNGWKKENDLVLKIGFDSSGLYDIG
QEKGYGAAQNMWMKGVSQSMFEARV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39398; Mature: 39398

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTVNNSDYYNNIPAGRDLNNLPNTSSADTTVGYQYDGLTEEDRFVQKVLQEHYDKVYKE
CEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECEEECCCCHHHHHHHHHHHHHHHHHHHH
NLSHSDPMAYIESKYCDVTSPNFCSYMTEDQRSIAYRNEKRMLQTGGKYSAGFARYDYAL
CCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
RNYKDVYTGGSRSVGYVRNTDREKQYARSVVNQQISNLLSKNGISISKQADLVFSIDPYT
HCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCEE
YQLTVSGNADRDILSQIEKLLNEGDNAKNIWTHAWICMHDADNEIVNSQANMTKANQYSL
EEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCHHHCCCCCCCCCHHHHH
WHEVYETTGYDARNATYKNGTFIAEDGTDLLALFKEKSKNGAGYELYSKRWLQYAKNGWK
HHHHHHHCCCCCCCCEECCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
KENDLVLKIGFDSSGLYDIGQEKGYGAAQNMWMKGVSQSMFEARV
CCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVTVNNSDYYNNIPAGRDLNNLPNTSSADTTVGYQYDGLTEEDRFVQKVLQEHYDKVYKE
CEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECEEECCCCHHHHHHHHHHHHHHHHHHHH
NLSHSDPMAYIESKYCDVTSPNFCSYMTEDQRSIAYRNEKRMLQTGGKYSAGFARYDYAL
CCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
RNYKDVYTGGSRSVGYVRNTDREKQYARSVVNQQISNLLSKNGISISKQADLVFSIDPYT
HCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCEE
YQLTVSGNADRDILSQIEKLLNEGDNAKNIWTHAWICMHDADNEIVNSQANMTKANQYSL
EEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCHHHCCCCCCCCCHHHHH
WHEVYETTGYDARNATYKNGTFIAEDGTDLLALFKEKSKNGAGYELYSKRWLQYAKNGWK
HHHHHHHCCCCCCCCEECCCEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
KENDLVLKIGFDSSGLYDIGQEKGYGAAQNMWMKGVSQSMFEARV
CCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]