| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238926003
Identifier: 238926003
GI number: 238926003
Start: 3409399
End: 3410352
Strand: Reverse
Name: 238926003
Synonym: EUBREC_3661
Alternate gene names: NA
Gene position: 3410352-3409399 (Counterclockwise)
Preceding gene: 238926004
Following gene: 238926002
Centisome position: 98.86
GC content: 38.57
Gene sequence:
>954_bases ATGATTGGAAGTATAGGAGCGGAGAGCCGTTATTCAACAGGTTATAACAACCTAAAACCAAATCGGAACCAGAATAAGTG GGCTGACACTTTGGCTCAGACGGTGGATAAGGAGGATATTAGCAGTAGAGCGGATATCAATCGTGCTAAGAAAAGTACAG TGATGGATTCTTATCTGGCACTGTCAGGAAAAACGATAAATACTTTGAAACAGGAATATTCAGAGTACGAATCCGAAAAT TATAGAATCGTACCCGATAATGAAGCTGAATGTTTTGATATATACAATAAAGACGGGGAGCGTTTGGGGGCATTTTCCTA TTCTGATATAAAAATAAGACAGGATGAAACAACAGGAAAGCAGTTTTTGATTTCTGAGCATGGAACGATGAGTTACGATG CCCTGGTATTAGATGATGAATTAAAAGATGCATTGCAGAATGTAATGGATAAAGATTCGCTGGATGTGGAGACTTTGCAG GGATTTACATTAAATACACATTCAGATACCGGCATCCAGTATTTAGTAAAAGACGGTGAGGAAGGCAGAGGTGGCAAGGT TCTTCTGCAAAATGAAGCGGATCGGAAGAGGTATGAAGAATTAGCGGAGATGTATTTTGACAAATACCCTAATTTAATTG AGAGTCGGGAAGAAGGTTTTATCTGGGCTGATTTAGAGATTAGAGGAATGGCAAAACGGACAGATCAGGGAATTATATCC ATAGGAGCTGATGGAATGTCATACAGTGACAATGAAAATTATAAAAACAATTGGAGTGTCCGGTTTTCTGGTTCTATGTA TGAAAAGCTGTATGAATGGCTTCAGAATAACAAGGATAGCATGGAGGAAATCCATAAATTTTCTACATGGCAAAAGGTTT TTGACGAAATTGGTGGAACGTATGAAAGAGTCTGGTCGAAAGAAGAACTGGATCAGGGATATTTGAATAATTGA
Upstream 100 bases:
>100_bases GTTACAGAGGAAAGGGCAGCATATCTGCAGCAGGAAAAAGAATTTTATACCGTACTGGCATCTAAAATAAGAGAATAAAA TGCCGGGAGGAATTTAAAAA
Downstream 100 bases:
>100_bases AAGAGGTGACAATATGAAAATATTTAATTACATGAATAATACGAATTCAATAATGGAAAAAAATACTGATAAAGTACAGA AAGGAAATAGTCAGACAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MIGSIGAESRYSTGYNNLKPNRNQNKWADTLAQTVDKEDISSRADINRAKKSTVMDSYLALSGKTINTLKQEYSEYESEN YRIVPDNEAECFDIYNKDGERLGAFSYSDIKIRQDETTGKQFLISEHGTMSYDALVLDDELKDALQNVMDKDSLDVETLQ GFTLNTHSDTGIQYLVKDGEEGRGGKVLLQNEADRKRYEELAEMYFDKYPNLIESREEGFIWADLEIRGMAKRTDQGIIS IGADGMSYSDNENYKNNWSVRFSGSMYEKLYEWLQNNKDSMEEIHKFSTWQKVFDEIGGTYERVWSKEELDQGYLNN
Sequences:
>Translated_317_residues MIGSIGAESRYSTGYNNLKPNRNQNKWADTLAQTVDKEDISSRADINRAKKSTVMDSYLALSGKTINTLKQEYSEYESEN YRIVPDNEAECFDIYNKDGERLGAFSYSDIKIRQDETTGKQFLISEHGTMSYDALVLDDELKDALQNVMDKDSLDVETLQ GFTLNTHSDTGIQYLVKDGEEGRGGKVLLQNEADRKRYEELAEMYFDKYPNLIESREEGFIWADLEIRGMAKRTDQGIIS IGADGMSYSDNENYKNNWSVRFSGSMYEKLYEWLQNNKDSMEEIHKFSTWQKVFDEIGGTYERVWSKEELDQGYLNN >Mature_317_residues MIGSIGAESRYSTGYNNLKPNRNQNKWADTLAQTVDKEDISSRADINRAKKSTVMDSYLALSGKTINTLKQEYSEYESEN YRIVPDNEAECFDIYNKDGERLGAFSYSDIKIRQDETTGKQFLISEHGTMSYDALVLDDELKDALQNVMDKDSLDVETLQ GFTLNTHSDTGIQYLVKDGEEGRGGKVLLQNEADRKRYEELAEMYFDKYPNLIESREEGFIWADLEIRGMAKRTDQGIIS IGADGMSYSDNENYKNNWSVRFSGSMYEKLYEWLQNNKDSMEEIHKFSTWQKVFDEIGGTYERVWSKEELDQGYLNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36585; Mature: 36585
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGSIGAESRYSTGYNNLKPNRNQNKWADTLAQTVDKEDISSRADINRAKKSTVMDSYLA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH LSGKTINTLKQEYSEYESENYRIVPDNEAECFDIYNKDGERLGAFSYSDIKIRQDETTGK HCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCEECCCCCCCEEEECCCCCCC QFLISEHGTMSYDALVLDDELKDALQNVMDKDSLDVETLQGFTLNTHSDTGIQYLVKDGE EEEEECCCCCCEEEEEECHHHHHHHHHHHCCCCCCHHHHCCCEEECCCCCCCEEEEECCC EGRGGKVLLQNEADRKRYEELAEMYFDKYPNLIESREEGFIWADLEIRGMAKRTDQGIIS CCCCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEEECCCHHHCCCCEEE IGADGMSYSDNENYKNNWSVRFSGSMYEKLYEWLQNNKDSMEEIHKFSTWQKVFDEIGGT ECCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCH YERVWSKEELDQGYLNN HHHHCCHHHHCCCCCCC >Mature Secondary Structure MIGSIGAESRYSTGYNNLKPNRNQNKWADTLAQTVDKEDISSRADINRAKKSTVMDSYLA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH LSGKTINTLKQEYSEYESENYRIVPDNEAECFDIYNKDGERLGAFSYSDIKIRQDETTGK HCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCEECCCCCCCEEEECCCCCCC QFLISEHGTMSYDALVLDDELKDALQNVMDKDSLDVETLQGFTLNTHSDTGIQYLVKDGE EEEEECCCCCCEEEEEECHHHHHHHHHHHCCCCCCHHHHCCCEEECCCCCCCEEEEECCC EGRGGKVLLQNEADRKRYEELAEMYFDKYPNLIESREEGFIWADLEIRGMAKRTDQGIIS CCCCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEEECCCHHHCCCCEEE IGADGMSYSDNENYKNNWSVRFSGSMYEKLYEWLQNNKDSMEEIHKFSTWQKVFDEIGGT ECCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCH YERVWSKEELDQGYLNN HHHHCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA