| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238926000
Identifier: 238926000
GI number: 238926000
Start: 3406715
End: 3407614
Strand: Reverse
Name: 238926000
Synonym: EUBREC_3658
Alternate gene names: NA
Gene position: 3407614-3406715 (Counterclockwise)
Preceding gene: 238926001
Following gene: 238925999
Centisome position: 98.78
GC content: 33.22
Gene sequence:
>900_bases ATGAAAGTTCAAGGAAATAGGTATATTAATAATCCAGAAATGATAAAAAATAAGGTTGAGAAGAAAACAACTGTTCCTCA GAATATTATTTCGGAGGATGATGTGAAAATCAGTGATTCAGCAAGAAAGTTAGTTGAGACTGCTCGTGATAAAGTCTCAG ATTTTCAGGCAATGCATTTTTCGTCAATCAATGGAGAGATAAAAGAAATACCAGCAGAATACAAATGTGAAAATTTATTC AAATTAGATTTGAAAGCAACTTCCATTTCTGGAGAACAAAGTGCGTTTGAAGGCTGTTCGGAAAATCAGTCAGAGGTTTT TGAAAAATGGCTGGACGAAAATGCTTCTGAATATTTGACAGAAGATGAAATGAAAGATTTAAAAGAGAAGATTAATGCAA TGACAGCAGATGTAGATTCTTTGAATGCTCAGGAGGGATATAGAGGAACTTCTTATGAATCTGTATTTTTGTTAAGTGCA AGTGAAGCGGGGCTAAGAAAAGTAAATGAAATGTATGTTCCAGAGCAATTACAAGCAGGTTTTTCAGACATGATTGACGA ATATGTTCATTTTAATGATTCAGCACGTAATTCCATCATGGAGAGAATGACACCAGATTACATGGTTGTTGGAATTGGAA GCAAAACAGAATCTTATAAGTACAAGTCAGAAATAATCTCAGATGAGACAGCTTTTTATACAAATGAGAAGAAAGAGATA AGTGGTATCTGCAATCAGTTTTTAAATGGTAAAACAGATCAAAAATTATTTTGTAATGAGATGAAAGACCGTTTAAATGA TTACTATGGAAGCAGGTATGAATTAAGGAATCAGCCAGAAGCTGTTGAAGGCAGAGTAAGTAATATGTTGAGTAAATTAC AACATATGTATGCACTTTAG
Upstream 100 bases:
>100_bases ACAGTGATGTAGATTACCTGAAAATAGATGCAGGTTCTTTGACATCGAGCAAGATAGATAAAGAAGTATAGAAAGTGTGG ACTAACTTAAGGAGGTTACC
Downstream 100 bases:
>100_bases GATTATGATGGAAATATGCAATGGTTATTGCTGAGTGTCAAAATTCAAAAGATGATATCAGTATGGTGGTTTGCAAATAA AGTTACATATCATATTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MKVQGNRYINNPEMIKNKVEKKTTVPQNIISEDDVKISDSARKLVETARDKVSDFQAMHFSSINGEIKEIPAEYKCENLF KLDLKATSISGEQSAFEGCSENQSEVFEKWLDENASEYLTEDEMKDLKEKINAMTADVDSLNAQEGYRGTSYESVFLLSA SEAGLRKVNEMYVPEQLQAGFSDMIDEYVHFNDSARNSIMERMTPDYMVVGIGSKTESYKYKSEIISDETAFYTNEKKEI SGICNQFLNGKTDQKLFCNEMKDRLNDYYGSRYELRNQPEAVEGRVSNMLSKLQHMYAL
Sequences:
>Translated_299_residues MKVQGNRYINNPEMIKNKVEKKTTVPQNIISEDDVKISDSARKLVETARDKVSDFQAMHFSSINGEIKEIPAEYKCENLF KLDLKATSISGEQSAFEGCSENQSEVFEKWLDENASEYLTEDEMKDLKEKINAMTADVDSLNAQEGYRGTSYESVFLLSA SEAGLRKVNEMYVPEQLQAGFSDMIDEYVHFNDSARNSIMERMTPDYMVVGIGSKTESYKYKSEIISDETAFYTNEKKEI SGICNQFLNGKTDQKLFCNEMKDRLNDYYGSRYELRNQPEAVEGRVSNMLSKLQHMYAL >Mature_299_residues MKVQGNRYINNPEMIKNKVEKKTTVPQNIISEDDVKISDSARKLVETARDKVSDFQAMHFSSINGEIKEIPAEYKCENLF KLDLKATSISGEQSAFEGCSENQSEVFEKWLDENASEYLTEDEMKDLKEKINAMTADVDSLNAQEGYRGTSYESVFLLSA SEAGLRKVNEMYVPEQLQAGFSDMIDEYVHFNDSARNSIMERMTPDYMVVGIGSKTESYKYKSEIISDETAFYTNEKKEI SGICNQFLNGKTDQKLFCNEMKDRLNDYYGSRYELRNQPEAVEGRVSNMLSKLQHMYAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34263; Mature: 34263
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVQGNRYINNPEMIKNKVEKKTTVPQNIISEDDVKISDSARKLVETARDKVSDFQAMHF CCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHH SSINGEIKEIPAEYKCENLFKLDLKATSISGEQSAFEGCSENQSEVFEKWLDENASEYLT HHCCCHHHHCCCHHHHCCCEEEEEEHCCCCCCHHHHCCCCCCHHHHHHHHHCCCHHHHHH EDEMKDLKEKINAMTADVDSLNAQEGYRGTSYESVFLLSASEAGLRKVNEMYVPEQLQAG HHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCHHHHCC FSDMIDEYVHFNDSARNSIMERMTPDYMVVGIGSKTESYKYKSEIISDETAFYTNEKKEI HHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHCCCHHHH SGICNQFLNGKTDQKLFCNEMKDRLNDYYGSRYELRNQPEAVEGRVSNMLSKLQHMYAL HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKVQGNRYINNPEMIKNKVEKKTTVPQNIISEDDVKISDSARKLVETARDKVSDFQAMHF CCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHH SSINGEIKEIPAEYKCENLFKLDLKATSISGEQSAFEGCSENQSEVFEKWLDENASEYLT HHCCCHHHHCCCHHHHCCCEEEEEEHCCCCCCHHHHCCCCCCHHHHHHHHHCCCHHHHHH EDEMKDLKEKINAMTADVDSLNAQEGYRGTSYESVFLLSASEAGLRKVNEMYVPEQLQAG HHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCHHHHCC FSDMIDEYVHFNDSARNSIMERMTPDYMVVGIGSKTESYKYKSEIISDETAFYTNEKKEI HHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHCCCHHHH SGICNQFLNGKTDQKLFCNEMKDRLNDYYGSRYELRNQPEAVEGRVSNMLSKLQHMYAL HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA